RNA–Protein interactions for RNA: ENST00000530932.1

PPFIA1-218, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 5

Gene PPFIA1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-218ENST00000530932 NISCHQ9Y2I1 1504 aa43.95■■■■■ 4.63
PPFIA1-218ENST00000530932 CCDC180Q9P1Z9 1646 aa39.24■■■■□ 3.87
PPFIA1-218ENST00000530932 ABCC9O60706 1549 aa38.43■■■■□ 3.74
PPFIA1-218ENST00000530932 RB1CC1Q8TDY2 1594 aa36.94■■■■□ 3.5
PPFIA1-218ENST00000530932 NACADO15069 1562 aa36.85■■■■□ 3.49
PPFIA1-218ENST00000530932 DCAF8L2P0C7V8 631 aa36.63■■■■□ 3.45
PPFIA1-218ENST00000530932 ZCCHC6Q5VYS8 1495 aaKnown RBP36.62■■■■□ 3.45
PPFIA1-218ENST00000530932 MYO15BQ96JP2 1530 aa36.59■■■■□ 3.45
PPFIA1-218ENST00000530932 DCAF1Q9Y4B6 1507 aa36.38■■■■□ 3.41
PPFIA1-218ENST00000530932 UNC13AQ9UPW8 1703 aa36.2■■■■□ 3.38
PPFIA1-218ENST00000530932 BICRAQ9NZM4 1560 aa35.84■■■■□ 3.33
PPFIA1-218ENST00000530932 PABPN1Q86U42 306 aaKnown RBP eCLIP35.8■■■■□ 3.32
PPFIA1-218ENST00000530932 SCRIBQ14160 1630 aa35.75■■■■□ 3.31
PPFIA1-218ENST00000530932 SHROOM4Q9ULL8 1493 aa35.46■■■■□ 3.27
PPFIA1-218ENST00000530932 DNAJC5BQ9UF47 199 aa35.31■■■■□ 3.24
PPFIA1-218ENST00000530932 EIF4G1Q04637 1599 aaKnown RBP34.89■■■■□ 3.18
PPFIA1-218ENST00000530932 CC2D2AQ9P2K1 1620 aa34.79■■■■□ 3.16
PPFIA1-218ENST00000530932 CECR2Q9BXF3 1484 aa34.53■■■■□ 3.12
PPFIA1-218ENST00000530932 SMARCA4P51532 1647 aa34.19■■■■□ 3.06
PPFIA1-218ENST00000530932 BAZ1AQ9NRL2 1556 aaPredicted RBP34.1■■■■□ 3.05
PPFIA1-218ENST00000530932 ATAD2BQ9ULI0 1458 aa33.97■■■■□ 3.03
PPFIA1-218ENST00000530932 NCAPD3P42695 1498 aa33.96■■■■□ 3.03
PPFIA1-218ENST00000530932 SMARCA2P51531 1590 aa33.96■■■■□ 3.03
PPFIA1-218ENST00000530932 MROH2BQ7Z745 1585 aa33.88■■■■□ 3.01
PPFIA1-218ENST00000530932 HMGXB3Q12766 1538 aa33.85■■■■□ 3.01
PPFIA1-218ENST00000530932 PEG3Q9GZU2 1588 aa33.85■■■■□ 3.01
PPFIA1-218ENST00000530932 BAZ1BQ9UIG0 1483 aaKnown RBP33.7■■■□□ 2.99
PPFIA1-218ENST00000530932 WIZO95785 1651 aa33.53■■■□□ 2.96
PPFIA1-218ENST00000530932 RSF1Q96T23 1441 aaPredicted RBP33.39■■■□□ 2.94
PPFIA1-218ENST00000530932 NESP48681 1621 aa33.21■■■□□ 2.91
PPFIA1-218ENST00000530932 TOP2AP11388 1531 aaKnown RBP33.18■■■□□ 2.9
PPFIA1-218ENST00000530932 LAMC3Q9Y6N6 1575 aa33.14■■■□□ 2.9
PPFIA1-218ENST00000530932 ERCC6Q03468 1493 aa33.12■■■□□ 2.89
PPFIA1-218ENST00000530932 CADPSQ9ULU8 1353 aa32.94■■■□□ 2.86
PPFIA1-218ENST00000530932 KIF21AQ7Z4S6 1674 aa32.91■■■□□ 2.86
PPFIA1-218ENST00000530932 PDS5BQ9NTI5 1447 aa32.85■■■□□ 2.85
PPFIA1-218ENST00000530932 CUX2O14529 1486 aa32.85■■■□□ 2.85
PPFIA1-218ENST00000530932 THOC2Q8NI27 1593 aaKnown RBP32.83■■■□□ 2.85
PPFIA1-218ENST00000530932 CFTRP13569 1480 aa32.74■■■□□ 2.83
PPFIA1-218ENST00000530932 CCDC88BA6NC98 1476 aa32.72■■■□□ 2.83
PPFIA1-218ENST00000530932 PRDM2Q13029 1718 aa32.65■■■□□ 2.82
PPFIA1-218ENST00000530932 FANCD2Q9BXW9 1451 aa32.61■■■□□ 2.81
PPFIA1-218ENST00000530932 CEP164Q9UPV0 1460 aa32.6■■■□□ 2.81
PPFIA1-218ENST00000530932 MRC2Q9UBG0 1479 aa32.58■■■□□ 2.81
PPFIA1-218ENST00000530932 WDR62O43379 1518 aa32.51■■■□□ 2.79
PPFIA1-218ENST00000530932 SUPT5HO00267 1087 aaKnown RBP32.37■■■□□ 2.77
PPFIA1-218ENST00000530932 URB2Q14146 1524 aaKnown RBP32.31■■■□□ 2.76
PPFIA1-218ENST00000530932 TOPBP1Q92547 1522 aa32.09■■■□□ 2.73
PPFIA1-218ENST00000530932 DNMBPQ6XZF7 1577 aa32.07■■■□□ 2.72
PPFIA1-218ENST00000530932 ABCC8Q09428 1581 aa32.04■■■□□ 2.72
PPFIA1-218ENST00000530932 DNAJC5Q9H3Z4 198 aa31.91■■■□□ 2.7
PPFIA1-218ENST00000530932 IFT140Q96RY7 1462 aa31.91■■■□□ 2.7
PPFIA1-218ENST00000530932 POLA1P09884 1462 aaPredicted RBP31.8■■■□□ 2.68
PPFIA1-218ENST00000530932 CUX1P39880 1505 aa31.8■■■□□ 2.68
PPFIA1-218ENST00000530932 TARBP1Q13395 1621 aaKnown RBP31.78■■■□□ 2.68
PPFIA1-218ENST00000530932 ZNF608Q9ULD9 1512 aaPredicted RBP31.77■■■□□ 2.68
PPFIA1-218ENST00000530932 EIF4G3O43432 1585 aaKnown RBP31.71■■■□□ 2.67
PPFIA1-218ENST00000530932 FGD5Q6ZNL6 1462 aa31.71■■■□□ 2.67
PPFIA1-218ENST00000530932 RAD54L2Q9Y4B4 1467 aa31.64■■■□□ 2.66
PPFIA1-218ENST00000530932 SOGA1O94964 1423 aa31.61■■■□□ 2.65
PPFIA1-218ENST00000530932 WDR97A6NE52 1622 aa31.55■■■□□ 2.64
PPFIA1-218ENST00000530932 AQRO60306 1485 aaKnown RBP eCLIP31.54■■■□□ 2.643e-6■■■■□ 21.9
PPFIA1-218ENST00000530932 BIVM-ERCC5R4GMW8 1640 aa31.54■■■□□ 2.64
PPFIA1-218ENST00000530932 WRNQ14191 1432 aaPredicted RBP eCLIP31.5■■■□□ 2.63
PPFIA1-218ENST00000530932 TOP2BQ02880 1626 aa31.5■■■□□ 2.63
PPFIA1-218ENST00000530932 SYNJ1O43426 1573 aa31.5■■■□□ 2.63
PPFIA1-218ENST00000530932 TDRD9Q8NDG6 1382 aaKnown RBP31.44■■■□□ 2.62
PPFIA1-218ENST00000530932 ABCA10Q8WWZ4 1543 aa31.39■■■□□ 2.62
PPFIA1-218ENST00000530932 CHD1O14646 1710 aa31.37■■■□□ 2.61
PPFIA1-218ENST00000530932 OSCARQ8IYS5 282 aa31.35■■■□□ 2.61
PPFIA1-218ENST00000530932 ABCA5Q8WWZ7 1642 aa31.34■■■□□ 2.61
PPFIA1-218ENST00000530932 PBRM1Q86U86 1689 aa31.33■■■□□ 2.61
PPFIA1-218ENST00000530932 GRIN2BQ13224 1484 aa31.3■■■□□ 2.6
PPFIA1-218ENST00000530932 SNAPC4Q5SXM2 1469 aa31.3■■■□□ 2.6
PPFIA1-218ENST00000530932 GAPVD1Q14C86 1478 aa31.27■■■□□ 2.6
PPFIA1-218ENST00000530932 MAGI1Q96QZ7 1491 aaPredicted RBP31.26■■■□□ 2.59
PPFIA1-218ENST00000530932 FBLN2P98095 1184 aa31.13■■■□□ 2.57
PPFIA1-218ENST00000530932 SYNJ2O15056 1496 aa31.12■■■□□ 2.57
PPFIA1-218ENST00000530932 ADAMTS12P58397 1594 aa31.05■■■□□ 2.56
PPFIA1-218ENST00000530932 CHMP7Q8WUX9 453 aaPredicted RBP31.03■■■□□ 2.56
PPFIA1-218ENST00000530932 ERICH3Q5RHP9 1530 aa31.02■■■□□ 2.56
PPFIA1-218ENST00000530932 RIMBP3CA6NJZ7 1639 aa31.02■■■□□ 2.56
PPFIA1-218ENST00000530932 RIMBP3BA6NNM3 1639 aa31.02■■■□□ 2.56
PPFIA1-218ENST00000530932 RIMBP3Q9UFD9 1639 aa31.02■■■□□ 2.56
PPFIA1-218ENST00000530932 CLASP1Q7Z460 1538 aa30.98■■■□□ 2.55
PPFIA1-218ENST00000530932 ARHGEF11O15085 1522 aa30.97■■■□□ 2.55
PPFIA1-218ENST00000530932 GRIN2AQ12879 1464 aa30.92■■■□□ 2.54
PPFIA1-218ENST00000530932 FHAD1B1AJZ9 1412 aa30.91■■■□□ 2.54
PPFIA1-218ENST00000530932 KIF27Q86VH2 1401 aa30.85■■■□□ 2.53
PPFIA1-218ENST00000530932 CEP170Q5SW79 1584 aa30.8■■■□□ 2.52
PPFIA1-218ENST00000530932 TRIM41Q8WV44 630 aa30.8■■■□□ 2.52
PPFIA1-218ENST00000530932 NUP160Q12769 1436 aa30.78■■■□□ 2.52
PPFIA1-218ENST00000530932 CUL7Q14999 1698 aa30.76■■■□□ 2.51
PPFIA1-218ENST00000530932 ARAP1Q96P48 1450 aa30.71■■■□□ 2.51
PPFIA1-218ENST00000530932 IGF1RP08069 1367 aa30.69■■■□□ 2.5
PPFIA1-218ENST00000530932 SHROOM2Q13796 1616 aa30.62■■■□□ 2.49
PPFIA1-218ENST00000530932 RUSC2Q8N2Y8 1516 aa30.6■■■□□ 2.49
PPFIA1-218ENST00000530932 CYB5RLQ6IPT4 315 aa30.56■■■□□ 2.48
PPFIA1-218ENST00000530932 ERCC6L2Q5T890 1561 aa30.53■■■□□ 2.48
PPFIA1-218ENST00000530932 CARMIL1Q5VZK9 1371 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms