RNA–Protein interactions for RNA: ENST00000530917.5

UBASH3B-207, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 5

Gene UBASH3B, Length 987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-207ENST00000530917 NISCHQ9Y2I1 1504 aa27.96■■■□□ 2.07
UBASH3B-207ENST00000530917 CCDC180Q9P1Z9 1646 aa24.6■■□□□ 1.53
UBASH3B-207ENST00000530917 ABCC9O60706 1549 aa23.43■■□□□ 1.34
UBASH3B-207ENST00000530917 ZCCHC6Q5VYS8 1495 aaKnown RBP23.4■■□□□ 1.34
UBASH3B-207ENST00000530917 DCAF1Q9Y4B6 1507 aa23.17■■□□□ 1.3
UBASH3B-207ENST00000530917 DCAF8L2P0C7V8 631 aa23.1■■□□□ 1.29
UBASH3B-207ENST00000530917 MYO15BQ96JP2 1530 aa23.03■■□□□ 1.28
UBASH3B-207ENST00000530917 NACADO15069 1562 aa22.97■■□□□ 1.27
UBASH3B-207ENST00000530917 RB1CC1Q8TDY2 1594 aa22.83■■□□□ 1.25
UBASH3B-207ENST00000530917 DNAJC5BQ9UF47 199 aa22.64■■□□□ 1.21
UBASH3B-207ENST00000530917 SCRIBQ14160 1630 aa22.46■■□□□ 1.19
UBASH3B-207ENST00000530917 SHROOM4Q9ULL8 1493 aa22.44■■□□□ 1.18
UBASH3B-207ENST00000530917 UNC13AQ9UPW8 1703 aa22.4■■□□□ 1.18
UBASH3B-207ENST00000530917 BICRAQ9NZM4 1560 aa22.12■■□□□ 1.13
UBASH3B-207ENST00000530917 PABPN1Q86U42 306 aaKnown RBP eCLIP22■■□□□ 1.11
UBASH3B-207ENST00000530917 CECR2Q9BXF3 1484 aa21.7■■□□□ 1.06
UBASH3B-207ENST00000530917 BAZ1AQ9NRL2 1556 aaPredicted RBP21.61■■□□□ 1.05
UBASH3B-207ENST00000530917 SMARCA4P51532 1647 aa21.56■■□□□ 1.04
UBASH3B-207ENST00000530917 MROH2BQ7Z745 1585 aa21.55■■□□□ 1.04
UBASH3B-207ENST00000530917 RSF1Q96T23 1441 aaPredicted RBP21.53■■□□□ 1.04
UBASH3B-207ENST00000530917 EIF4G1Q04637 1599 aaKnown RBP21.47■■□□□ 1.03
UBASH3B-207ENST00000530917 SUPT5HO00267 1087 aaKnown RBP21.46■■□□□ 1.03
UBASH3B-207ENST00000530917 WIZO95785 1651 aa21.38■■□□□ 1.01
UBASH3B-207ENST00000530917 PEG3Q9GZU2 1588 aa21.35■■□□□ 1.01
UBASH3B-207ENST00000530917 DNAJC5Q9H3Z4 198 aa21.32■■□□□ 1
UBASH3B-207ENST00000530917 SMARCA2P51531 1590 aa21.28■■□□□ 1
UBASH3B-207ENST00000530917 ATAD2BQ9ULI0 1458 aa21.27■■□□□ 1
UBASH3B-207ENST00000530917 CC2D2AQ9P2K1 1620 aa21.24■□□□□ 0.99
UBASH3B-207ENST00000530917 NCAPD3P42695 1498 aa21.17■□□□□ 0.98
UBASH3B-207ENST00000530917 TOP2AP11388 1531 aaKnown RBP21.15■□□□□ 0.98
UBASH3B-207ENST00000530917 BAZ1BQ9UIG0 1483 aaKnown RBP21.13■□□□□ 0.97
UBASH3B-207ENST00000530917 HMGXB3Q12766 1538 aa21.12■□□□□ 0.97
UBASH3B-207ENST00000530917 CCDC88BA6NC98 1476 aa20.92■□□□□ 0.94
UBASH3B-207ENST00000530917 CFTRP13569 1480 aa20.59■□□□□ 0.89
UBASH3B-207ENST00000530917 CADPSQ9ULU8 1353 aa20.59■□□□□ 0.89
UBASH3B-207ENST00000530917 PRDM2Q13029 1718 aa20.58■□□□□ 0.88
UBASH3B-207ENST00000530917 LAMC3Q9Y6N6 1575 aa20.52■□□□□ 0.88
UBASH3B-207ENST00000530917 CUX2O14529 1486 aa20.5■□□□□ 0.87
UBASH3B-207ENST00000530917 NESP48681 1621 aa20.45■□□□□ 0.87
UBASH3B-207ENST00000530917 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
UBASH3B-207ENST00000530917 PDS5BQ9NTI5 1447 aa20.35■□□□□ 0.85
UBASH3B-207ENST00000530917 FANCD2Q9BXW9 1451 aa20.34■□□□□ 0.85
UBASH3B-207ENST00000530917 ABCC8Q09428 1581 aa20.34■□□□□ 0.85
UBASH3B-207ENST00000530917 ERCC6Q03468 1493 aa20.29■□□□□ 0.84
UBASH3B-207ENST00000530917 KIF21AQ7Z4S6 1674 aa20.29■□□□□ 0.84
UBASH3B-207ENST00000530917 WRNQ14191 1432 aaPredicted RBP eCLIP20.27■□□□□ 0.83
UBASH3B-207ENST00000530917 TRIM41Q8WV44 630 aa20.25■□□□□ 0.83
UBASH3B-207ENST00000530917 CEP164Q9UPV0 1460 aa20.24■□□□□ 0.83
UBASH3B-207ENST00000530917 SYNJ1O43426 1573 aa20.2■□□□□ 0.82
UBASH3B-207ENST00000530917 BIVM-ERCC5R4GMW8 1640 aa20.2■□□□□ 0.82
UBASH3B-207ENST00000530917 CUX1P39880 1505 aa20.18■□□□□ 0.82
UBASH3B-207ENST00000530917 TOP2BQ02880 1626 aa20.18■□□□□ 0.82
UBASH3B-207ENST00000530917 DNMBPQ6XZF7 1577 aa20.12■□□□□ 0.81
UBASH3B-207ENST00000530917 URB2Q14146 1524 aaKnown RBP20.1■□□□□ 0.81
UBASH3B-207ENST00000530917 TOPBP1Q92547 1522 aa20.1■□□□□ 0.81
UBASH3B-207ENST00000530917 MRC2Q9UBG0 1479 aa20.09■□□□□ 0.81
UBASH3B-207ENST00000530917 THOC2Q8NI27 1593 aaKnown RBP20.02■□□□□ 0.8
UBASH3B-207ENST00000530917 WDR62O43379 1518 aa20.01■□□□□ 0.79
UBASH3B-207ENST00000530917 FGD5Q6ZNL6 1462 aa20■□□□□ 0.79
UBASH3B-207ENST00000530917 POLA1P09884 1462 aaPredicted RBP19.95■□□□□ 0.78
UBASH3B-207ENST00000530917 SOGA1O94964 1423 aa19.9■□□□□ 0.78
UBASH3B-207ENST00000530917 RAD54L2Q9Y4B4 1467 aa19.86■□□□□ 0.77
UBASH3B-207ENST00000530917 EEA1Q15075 1411 aa19.85■□□□□ 0.77
UBASH3B-207ENST00000530917 ABCA10Q8WWZ4 1543 aa19.85■□□□□ 0.77
UBASH3B-207ENST00000530917 WDR97A6NE52 1622 aa19.84■□□□□ 0.77
UBASH3B-207ENST00000530917 TARBP1Q13395 1621 aaKnown RBP19.84■□□□□ 0.77
UBASH3B-207ENST00000530917 RUSC2Q8N2Y8 1516 aa19.83■□□□□ 0.77
UBASH3B-207ENST00000530917 KIF27Q86VH2 1401 aa19.81■□□□□ 0.76
UBASH3B-207ENST00000530917 IFT140Q96RY7 1462 aa19.8■□□□□ 0.76
UBASH3B-207ENST00000530917 FAM9AQ8IZU1 332 aaPredicted RBP19.8■□□□□ 0.76
UBASH3B-207ENST00000530917 CSRNP3Q8WYN3 585 aa19.76■□□□□ 0.75
UBASH3B-207ENST00000530917 ABCA5Q8WWZ7 1642 aa19.72■□□□□ 0.75
UBASH3B-207ENST00000530917 TDRD9Q8NDG6 1382 aaKnown RBP19.7■□□□□ 0.74
UBASH3B-207ENST00000530917 GAPVD1Q14C86 1478 aa19.68■□□□□ 0.74
UBASH3B-207ENST00000530917 IGF1RP08069 1367 aa19.67■□□□□ 0.74
UBASH3B-207ENST00000530917 ZNF608Q9ULD9 1512 aaPredicted RBP19.66■□□□□ 0.74
UBASH3B-207ENST00000530917 PBRM1Q86U86 1689 aa19.64■□□□□ 0.73
UBASH3B-207ENST00000530917 AQRO60306 1485 aaKnown RBP eCLIP19.63■□□□□ 0.73
UBASH3B-207ENST00000530917 ERICH3Q5RHP9 1530 aa19.62■□□□□ 0.73
UBASH3B-207ENST00000530917 KIF21BO75037 1637 aa19.62■□□□□ 0.73
UBASH3B-207ENST00000530917 EIF4G3O43432 1585 aaKnown RBP19.61■□□□□ 0.73
UBASH3B-207ENST00000530917 LOC105371045A0A1W2PR82 267 aa19.6■□□□□ 0.73
UBASH3B-207ENST00000530917 PRXQ9BXM0 1461 aa19.59■□□□□ 0.73
UBASH3B-207ENST00000530917 CUL7Q14999 1698 aa19.59■□□□□ 0.73
UBASH3B-207ENST00000530917 GRIN2BQ13224 1484 aa19.58■□□□□ 0.72
UBASH3B-207ENST00000530917 CARMIL1Q5VZK9 1371 aa19.56■□□□□ 0.72
UBASH3B-207ENST00000530917 GOLGA3Q08378 1498 aa19.53■□□□□ 0.72
UBASH3B-207ENST00000530917 RAPGEF2Q9Y4G8 1499 aa19.5■□□□□ 0.71
UBASH3B-207ENST00000530917 EHMT2Q96KQ7 1210 aa19.48■□□□□ 0.71
UBASH3B-207ENST00000530917 FHAD1B1AJZ9 1412 aa19.47■□□□□ 0.71
UBASH3B-207ENST00000530917 ADAMTS12P58397 1594 aa19.47■□□□□ 0.71
UBASH3B-207ENST00000530917 MAGI1Q96QZ7 1491 aaPredicted RBP19.47■□□□□ 0.71
UBASH3B-207ENST00000530917 SNAPC4Q5SXM2 1469 aa19.45■□□□□ 0.7
UBASH3B-207ENST00000530917 UBTFP17480 764 aaKnown RBP19.44■□□□□ 0.7
UBASH3B-207ENST00000530917 OSCARQ8IYS5 282 aa19.43■□□□□ 0.7
UBASH3B-207ENST00000530917 TNIKQ9UKE5 1360 aa19.43■□□□□ 0.7
UBASH3B-207ENST00000530917 SYNJ2O15056 1496 aa19.38■□□□□ 0.69
UBASH3B-207ENST00000530917 CTTNBP2Q8WZ74 1663 aa19.33■□□□□ 0.69
UBASH3B-207ENST00000530917 AEBP2Q6ZN18 517 aaPredicted RBP19.33■□□□□ 0.68
UBASH3B-207ENST00000530917 CHMP7Q8WUX9 453 aaPredicted RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms