RNA–Protein interactions for RNA: ENST00000530819.1

MED17-207, Transcript of mediator complex subunit 17, humanhuman

TSL 2

Gene MED17, Length 2,278 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED17-207ENST00000530819 NISCHQ9Y2I1 1504 aa45.63■■■■■ 4.89
MED17-207ENST00000530819 CCDC180Q9P1Z9 1646 aa39.57■■■■□ 3.92
MED17-207ENST00000530819 ZCCHC6Q5VYS8 1495 aaKnown RBP38.38■■■■□ 3.73
MED17-207ENST00000530819 DCAF1Q9Y4B6 1507 aa37.72■■■■□ 3.63
MED17-207ENST00000530819 DCAF8L2P0C7V8 631 aa37.61■■■■□ 3.61
MED17-207ENST00000530819 SHROOM4Q9ULL8 1493 aa37.47■■■■□ 3.59
MED17-207ENST00000530819 ABCC9O60706 1549 aa37.15■■■■□ 3.54
MED17-207ENST00000530819 MYO15BQ96JP2 1530 aa37.14■■■■□ 3.54
MED17-207ENST00000530819 NACADO15069 1562 aa36.8■■■■□ 3.48
MED17-207ENST00000530819 SCRIBQ14160 1630 aa36.45■■■■□ 3.43
MED17-207ENST00000530819 RB1CC1Q8TDY2 1594 aa36.39■■■■□ 3.42
MED17-207ENST00000530819 SUPT5HO00267 1087 aaKnown RBP36.25■■■■□ 3.39
MED17-207ENST00000530819 UNC13AQ9UPW8 1703 aa35.7■■■■□ 3.31
MED17-207ENST00000530819 RSF1Q96T23 1441 aaPredicted RBP35.55■■■■□ 3.28
MED17-207ENST00000530819 CECR2Q9BXF3 1484 aa35.45■■■■□ 3.27
MED17-207ENST00000530819 BICRAQ9NZM4 1560 aa35.33■■■■□ 3.25
MED17-207ENST00000530819 MROH2BQ7Z745 1585 aa35.27■■■■□ 3.24
MED17-207ENST00000530819 BAZ1AQ9NRL2 1556 aaPredicted RBP35.18■■■■□ 3.22
MED17-207ENST00000530819 PABPN1Q86U42 306 aaKnown RBP eCLIP35.15■■■■□ 3.22
MED17-207ENST00000530819 WIZO95785 1651 aa35■■■■□ 3.19
MED17-207ENST00000530819 SMARCA4P51532 1647 aa34.98■■■■□ 3.19
MED17-207ENST00000530819 CHIC1Q5VXU3 224 aa34.92■■■■□ 3.18
MED17-207ENST00000530819 TOP2AP11388 1531 aaKnown RBP34.61■■■■□ 3.13
MED17-207ENST00000530819 PEG3Q9GZU2 1588 aa34.56■■■■□ 3.12
MED17-207ENST00000530819 ATAD2BQ9ULI0 1458 aa34.34■■■■□ 3.09
MED17-207ENST00000530819 SMARCA2P51531 1590 aa34.32■■■■□ 3.08
MED17-207ENST00000530819 CCDC88BA6NC98 1476 aa34.31■■■■□ 3.08
MED17-207ENST00000530819 EIF4G1Q04637 1599 aaKnown RBP34.22■■■■□ 3.07
MED17-207ENST00000530819 BAZ1BQ9UIG0 1483 aaKnown RBP34.14■■■■□ 3.06
MED17-207ENST00000530819 TRIM41Q8WV44 630 aa34.06■■■■□ 3.04
MED17-207ENST00000530819 NCAPD3P42695 1498 aa34■■■■□ 3.03
MED17-207ENST00000530819 HRCP23327 699 aa33.96■■■■□ 3.03
MED17-207ENST00000530819 HMGXB3Q12766 1538 aa33.94■■■■□ 3.02
MED17-207ENST00000530819 ABCC8Q09428 1581 aa33.69■■■□□ 2.98
MED17-207ENST00000530819 CC2D2AQ9P2K1 1620 aa33.63■■■□□ 2.97
MED17-207ENST00000530819 LOC105371045A0A1W2PR82 267 aa33.61■■■□□ 2.97
MED17-207ENST00000530819 FAM9AQ8IZU1 332 aaPredicted RBP33.44■■■□□ 2.94
MED17-207ENST00000530819 WRNQ14191 1432 aaPredicted RBP eCLIP33.43■■■□□ 2.94
MED17-207ENST00000530819 CFTRP13569 1480 aa33.34■■■□□ 2.93
MED17-207ENST00000530819 SYNJ1O43426 1573 aa33.27■■■□□ 2.92
MED17-207ENST00000530819 PCGF6Q9BYE7 350 aa33.2■■■□□ 2.91
MED17-207ENST00000530819 SOGA1O94964 1423 aa33.16■■■□□ 2.9
MED17-207ENST00000530819 CADPSQ9ULU8 1353 aa33.16■■■□□ 2.9
MED17-207ENST00000530819 PRDM2Q13029 1718 aa33.13■■■□□ 2.89
MED17-207ENST00000530819 EEA1Q15075 1411 aa33.12■■■□□ 2.89
MED17-207ENST00000530819 TOP2BQ02880 1626 aa33.11■■■□□ 2.89
MED17-207ENST00000530819 BIVM-ERCC5R4GMW8 1640 aa33.05■■■□□ 2.88
MED17-207ENST00000530819 PPARGC1BQ86YN6 1023 aaKnown RBP33.03■■■□□ 2.88
MED17-207ENST00000530819 RUSC2Q8N2Y8 1516 aa33.02■■■□□ 2.88
MED17-207ENST00000530819 DNAJC5BQ9UF47 199 aa32.98■■■□□ 2.87
MED17-207ENST00000530819 CSRNP3Q8WYN3 585 aa32.97■■■□□ 2.87
MED17-207ENST00000530819 EHMT2Q96KQ7 1210 aa32.95■■■□□ 2.87
MED17-207ENST00000530819 CUX1P39880 1505 aa32.94■■■□□ 2.86
MED17-207ENST00000530819 FANCD2Q9BXW9 1451 aa32.77■■■□□ 2.84
MED17-207ENST00000530819 LAMC3Q9Y6N6 1575 aa32.75■■■□□ 2.83
MED17-207ENST00000530819 NESP48681 1621 aa32.75■■■□□ 2.83
MED17-207ENST00000530819 TNIKQ9UKE5 1360 aa32.68■■■□□ 2.82
MED17-207ENST00000530819 GOLGA3Q08378 1498 aa32.68■■■□□ 2.82
MED17-207ENST00000530819 KIF21BO75037 1637 aa32.67■■■□□ 2.82
MED17-207ENST00000530819 CEP164Q9UPV0 1460 aa32.65■■■□□ 2.82
MED17-207ENST00000530819 UBTFP17480 764 aaKnown RBP32.56■■■□□ 2.8
MED17-207ENST00000530819 KIF27Q86VH2 1401 aa32.55■■■□□ 2.8
MED17-207ENST00000530819 FGD5Q6ZNL6 1462 aa32.53■■■□□ 2.8
MED17-207ENST00000530819 DNMBPQ6XZF7 1577 aa32.52■■■□□ 2.8
MED17-207ENST00000530819 CEP162Q5TB80 1403 aa32.51■■■□□ 2.79
MED17-207ENST00000530819 PDS5BQ9NTI5 1447 aa32.5■■■□□ 2.79
MED17-207ENST00000530819 TOPBP1Q92547 1522 aa32.46■■■□□ 2.79
MED17-207ENST00000530819 RAPGEF2Q9Y4G8 1499 aa32.45■■■□□ 2.79
MED17-207ENST00000530819 PRXQ9BXM0 1461 aa32.44■■■□□ 2.78
MED17-207ENST00000530819 PELP1Q8IZL8 1130 aaKnown RBP32.43■■■□□ 2.78
MED17-207ENST00000530819 TRIM26Q12899 539 aaPredicted RBP32.41■■■□□ 2.78
MED17-207ENST00000530819 ERICH3Q5RHP9 1530 aa32.39■■■□□ 2.78
MED17-207ENST00000530819 CUX2O14529 1486 aa32.38■■■□□ 2.77
MED17-207ENST00000530819 URB2Q14146 1524 aaKnown RBP32.35■■■□□ 2.77
MED17-207ENST00000530819 POLA1P09884 1462 aaPredicted RBP32.33■■■□□ 2.77
MED17-207ENST00000530819 KIF21AQ7Z4S6 1674 aa32.32■■■□□ 2.77
MED17-207ENST00000530819 IGF1RP08069 1367 aa32.27■■■□□ 2.76
MED17-207ENST00000530819 ABCA10Q8WWZ4 1543 aa32.26■■■□□ 2.75
MED17-207ENST00000530819 RAD54L2Q9Y4B4 1467 aa32.24■■■□□ 2.75
MED17-207ENST00000530819 CLIP1P30622 1438 aa32.18■■■□□ 2.74
MED17-207ENST00000530819 ZEB1P37275 1124 aaPredicted RBP32.14■■■□□ 2.74
MED17-207ENST00000530819 CARMIL1Q5VZK9 1371 aa32.09■■■□□ 2.73
MED17-207ENST00000530819 WDR97A6NE52 1622 aa32.09■■■□□ 2.73
MED17-207ENST00000530819 MRC2Q9UBG0 1479 aa32.04■■■□□ 2.72
MED17-207ENST00000530819 VPS8Q8N3P4 1428 aa31.95■■■□□ 2.7
MED17-207ENST00000530819 TARBP1Q13395 1621 aaKnown RBP31.95■■■□□ 2.7
MED17-207ENST00000530819 ABCA5Q8WWZ7 1642 aa31.95■■■□□ 2.7
MED17-207ENST00000530819 CUL7Q14999 1698 aa31.92■■■□□ 2.7
MED17-207ENST00000530819 TDRD9Q8NDG6 1382 aaKnown RBP31.91■■■□□ 2.7
MED17-207ENST00000530819 RANGAP1P46060 587 aaPredicted RBP31.91■■■□□ 2.7
MED17-207ENST00000530819 GAPVD1Q14C86 1478 aa31.88■■■□□ 2.69
MED17-207ENST00000530819 SCAF1Q9H7N4 1312 aaKnown RBP31.88■■■□□ 2.69
MED17-207ENST00000530819 WDR62O43379 1518 aa31.87■■■□□ 2.69
MED17-207ENST00000530819 ARAP1Q96P48 1450 aa31.82■■■□□ 2.68
MED17-207ENST00000530819 ERCC6Q03468 1493 aa31.79■■■□□ 2.68
MED17-207ENST00000530819 ARHGAP35Q9NRY4 1499 aa31.77■■■□□ 2.68
MED17-207ENST00000530819 IFT140Q96RY7 1462 aa31.72■■■□□ 2.67
MED17-207ENST00000530819 THOC2Q8NI27 1593 aaKnown RBP31.69■■■□□ 2.66
MED17-207ENST00000530819 AQRO60306 1485 aaKnown RBP eCLIP31.64■■■□□ 2.668e-9■■□□□ 13.6
MED17-207ENST00000530819 PBRM1Q86U86 1689 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms