RNA–Protein interactions for RNA: ENST00000530798.5

PPFIA1-217, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 5

Gene PPFIA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-217ENST00000530798 AEBP2Q6ZN18 517 aaPredicted RBP17.55■□□□□ 0.4
PPFIA1-217ENST00000530798 NISCHQ9Y2I1 1504 aa16.75■□□□□ 0.27
PPFIA1-217ENST00000530798 CHIC1Q5VXU3 224 aa16.55■□□□□ 0.24
PPFIA1-217ENST00000530798 ABCC9O60706 1549 aa15.33■□□□□ 0.04
PPFIA1-217ENST00000530798 SENP3Q9H4L4 574 aaPredicted RBP15.16■□□□□ 0.02
PPFIA1-217ENST00000530798 CCDC180Q9P1Z9 1646 aa15.05■□□□□ -0
PPFIA1-217ENST00000530798 PHF23Q9BUL5 403 aaPredicted RBP14.84□□□□□ -0.03
PPFIA1-217ENST00000530798 DNAJC5BQ9UF47 199 aa14.58□□□□□ -0.08
PPFIA1-217ENST00000530798 RB1CC1Q8TDY2 1594 aa14.46□□□□□ -0.09
PPFIA1-217ENST00000530798 NACADO15069 1562 aa14.33□□□□□ -0.12
PPFIA1-217ENST00000530798 PABPN1Q86U42 306 aaKnown RBP eCLIP14.27□□□□□ -0.13
PPFIA1-217ENST00000530798 DCAF8L2P0C7V8 631 aa14.23□□□□□ -0.13
PPFIA1-217ENST00000530798 MYO15BQ96JP2 1530 aa14.08□□□□□ -0.16
PPFIA1-217ENST00000530798 FOXD1Q16676 465 aa14.07□□□□□ -0.16
PPFIA1-217ENST00000530798 BICRAQ9NZM4 1560 aa14.06□□□□□ -0.16
PPFIA1-217ENST00000530798 UNC13AQ9UPW8 1703 aa14.03□□□□□ -0.16
PPFIA1-217ENST00000530798 SHROOM4Q9ULL8 1493 aa13.88□□□□□ -0.19
PPFIA1-217ENST00000530798 ZCCHC6Q5VYS8 1495 aaKnown RBP13.86□□□□□ -0.19
PPFIA1-217ENST00000530798 CECR2Q9BXF3 1484 aa13.83□□□□□ -0.2
PPFIA1-217ENST00000530798 DCAF1Q9Y4B6 1507 aa13.83□□□□□ -0.2
PPFIA1-217ENST00000530798 CC2D2AQ9P2K1 1620 aa13.79□□□□□ -0.2
PPFIA1-217ENST00000530798 SCRIBQ14160 1630 aa13.75□□□□□ -0.21
PPFIA1-217ENST00000530798 EIF4G1Q04637 1599 aaKnown RBP13.74□□□□□ -0.21
PPFIA1-217ENST00000530798 POTEDQ86YR6 584 aa13.55□□□□□ -0.24
PPFIA1-217ENST00000530798 DNAJC5Q9H3Z4 198 aa13.52□□□□□ -0.25
PPFIA1-217ENST00000530798 MSH5O43196 834 aa13.43□□□□□ -0.26
PPFIA1-217ENST00000530798 CUX2O14529 1486 aa13.29□□□□□ -0.28
PPFIA1-217ENST00000530798 NCAPD3P42695 1498 aa13.26□□□□□ -0.29
PPFIA1-217ENST00000530798 ERCC6Q03468 1493 aa13.25□□□□□ -0.29
PPFIA1-217ENST00000530798 ATAD2BQ9ULI0 1458 aa13.19□□□□□ -0.3
PPFIA1-217ENST00000530798 HMGXB3Q12766 1538 aa13.13□□□□□ -0.31
PPFIA1-217ENST00000530798 SMARCA2P51531 1590 aa13.12□□□□□ -0.31
PPFIA1-217ENST00000530798 NESP48681 1621 aa13.1□□□□□ -0.31
PPFIA1-217ENST00000530798 PIAS4Q8N2W9 510 aaPredicted RBP13.1□□□□□ -0.31
PPFIA1-217ENST00000530798 SMARCA4P51532 1647 aa13.09□□□□□ -0.31
PPFIA1-217ENST00000530798 BAZ1BQ9UIG0 1483 aaKnown RBP13.04□□□□□ -0.32
PPFIA1-217ENST00000530798 PLPPR3Q6T4P5 718 aa13.03□□□□□ -0.32
PPFIA1-217ENST00000530798 BAZ1AQ9NRL2 1556 aaPredicted RBP13□□□□□ -0.33
PPFIA1-217ENST00000530798 THOC2Q8NI27 1593 aaKnown RBP12.98□□□□□ -0.33
PPFIA1-217ENST00000530798 PEG3Q9GZU2 1588 aa12.97□□□□□ -0.33
PPFIA1-217ENST00000530798 LAMC3Q9Y6N6 1575 aa12.94□□□□□ -0.34
PPFIA1-217ENST00000530798 PDS5BQ9NTI5 1447 aa12.92□□□□□ -0.34
PPFIA1-217ENST00000530798 MROH2BQ7Z745 1585 aa12.91□□□□□ -0.34
PPFIA1-217ENST00000530798 CADPSQ9ULU8 1353 aa12.85□□□□□ -0.35
PPFIA1-217ENST00000530798 KIF21AQ7Z4S6 1674 aa12.85□□□□□ -0.35
PPFIA1-217ENST00000530798 TRIM41Q8WV44 630 aa12.84□□□□□ -0.35
PPFIA1-217ENST00000530798 PPP6R1Q9UPN7 881 aa12.84□□□□□ -0.35
PPFIA1-217ENST00000530798 MRC2Q9UBG0 1479 aa12.83□□□□□ -0.36
PPFIA1-217ENST00000530798 ADRA2BP18089 450 aa12.79□□□□□ -0.36
PPFIA1-217ENST00000530798 WDR62O43379 1518 aa12.78□□□□□ -0.36
PPFIA1-217ENST00000530798 CEP164Q9UPV0 1460 aa12.72□□□□□ -0.37
PPFIA1-217ENST00000530798 FANCD2Q9BXW9 1451 aa12.71□□□□□ -0.38
PPFIA1-217ENST00000530798 WIZO95785 1651 aa12.69□□□□□ -0.38
PPFIA1-217ENST00000530798 CFTRP13569 1480 aa12.66□□□□□ -0.38
PPFIA1-217ENST00000530798 OSCARQ8IYS5 282 aa12.65□□□□□ -0.38
PPFIA1-217ENST00000530798 URB2Q14146 1524 aaKnown RBP12.61□□□□□ -0.39
PPFIA1-217ENST00000530798 RSF1Q96T23 1441 aaPredicted RBP12.6□□□□□ -0.39
PPFIA1-217ENST00000530798 TOP2AP11388 1531 aaKnown RBP12.57□□□□□ -0.4
PPFIA1-217ENST00000530798 ZNF608Q9ULD9 1512 aaPredicted RBP12.49□□□□□ -0.41
PPFIA1-217ENST00000530798 IFT140Q96RY7 1462 aa12.49□□□□□ -0.41
PPFIA1-217ENST00000530798 RIMBP3CA6NJZ7 1639 aa12.47□□□□□ -0.41
PPFIA1-217ENST00000530798 RIMBP3BA6NNM3 1639 aa12.47□□□□□ -0.41
PPFIA1-217ENST00000530798 RIMBP3Q9UFD9 1639 aa12.47□□□□□ -0.41
PPFIA1-217ENST00000530798 ARHGEF11O15085 1522 aa12.45□□□□□ -0.42
PPFIA1-217ENST00000530798 TOPBP1Q92547 1522 aa12.43□□□□□ -0.42
PPFIA1-217ENST00000530798 CCDC88BA6NC98 1476 aa12.43□□□□□ -0.42
PPFIA1-217ENST00000530798 CYB5RLQ6IPT4 315 aa12.37□□□□□ -0.43
PPFIA1-217ENST00000530798 ABCC8Q09428 1581 aa12.37□□□□□ -0.43
PPFIA1-217ENST00000530798 PRDM2Q13029 1718 aa12.37□□□□□ -0.43
PPFIA1-217ENST00000530798 EIF4G3O43432 1585 aaKnown RBP12.36□□□□□ -0.43
PPFIA1-217ENST00000530798 AQRO60306 1485 aaKnown RBP eCLIP12.35□□□□□ -0.433e-6■■■■■ 28.3
PPFIA1-217ENST00000530798 DNMBPQ6XZF7 1577 aa12.35□□□□□ -0.43
PPFIA1-217ENST00000530798 ARAP1Q96P48 1450 aa12.33□□□□□ -0.44
PPFIA1-217ENST00000530798 FBLN2P98095 1184 aa12.31□□□□□ -0.44
PPFIA1-217ENST00000530798 TARBP1Q13395 1621 aaKnown RBP12.3□□□□□ -0.44
PPFIA1-217ENST00000530798 POLA1P09884 1462 aaPredicted RBP12.3□□□□□ -0.44
PPFIA1-217ENST00000530798 TRHP20396 242 aaPredicted RBP12.29□□□□□ -0.44
PPFIA1-217ENST00000530798 CHD1O14646 1710 aa12.26□□□□□ -0.45
PPFIA1-217ENST00000530798 TDRD9Q8NDG6 1382 aaKnown RBP12.26□□□□□ -0.45
PPFIA1-217ENST00000530798 RAD54L2Q9Y4B4 1467 aa12.26□□□□□ -0.45
PPFIA1-217ENST00000530798 SOGA1O94964 1423 aa12.23□□□□□ -0.45
PPFIA1-217ENST00000530798 SNAPC4Q5SXM2 1469 aa12.22□□□□□ -0.45
PPFIA1-217ENST00000530798 CHMP7Q8WUX9 453 aaPredicted RBP12.19□□□□□ -0.46
PPFIA1-217ENST00000530798 CLASP1Q7Z460 1538 aa12.19□□□□□ -0.46
PPFIA1-217ENST00000530798 FGD5Q6ZNL6 1462 aa12.19□□□□□ -0.46
PPFIA1-217ENST00000530798 MAGI1Q96QZ7 1491 aaPredicted RBP12.17□□□□□ -0.46
PPFIA1-217ENST00000530798 WDR97A6NE52 1622 aa12.16□□□□□ -0.46
PPFIA1-217ENST00000530798 GRIN2BQ13224 1484 aa12.15□□□□□ -0.46
PPFIA1-217ENST00000530798 SYNJ1O43426 1573 aa12.15□□□□□ -0.46
PPFIA1-217ENST00000530798 CUX1P39880 1505 aa12.15□□□□□ -0.46
PPFIA1-217ENST00000530798 SYNJ2O15056 1496 aa12.14□□□□□ -0.47
PPFIA1-217ENST00000530798 GAPVD1Q14C86 1478 aa12.09□□□□□ -0.47
PPFIA1-217ENST00000530798 ABCA10Q8WWZ4 1543 aa12.04□□□□□ -0.48
PPFIA1-217ENST00000530798 ABCA5Q8WWZ7 1642 aa12□□□□□ -0.49
PPFIA1-217ENST00000530798 GRIN2AQ12879 1464 aa12□□□□□ -0.49
PPFIA1-217ENST00000530798 PBRM1Q86U86 1689 aa12□□□□□ -0.49
PPFIA1-217ENST00000530798 ERCC6L2Q5T890 1561 aa11.98□□□□□ -0.49
PPFIA1-217ENST00000530798 NUP160Q12769 1436 aa11.98□□□□□ -0.49
PPFIA1-217ENST00000530798 WRNQ14191 1432 aaPredicted RBP eCLIP11.96□□□□□ -0.49
PPFIA1-217ENST00000530798 ADAMTS12P58397 1594 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms