RNA–Protein interactions for RNA: ENST00000530775.1

SPTBN2-206, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

TSL 3

Gene SPTBN2, Length 473 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-206ENST00000530775 NISCHQ9Y2I1 1504 aa30.57■■■□□ 2.48
SPTBN2-206ENST00000530775 CCDC180Q9P1Z9 1646 aa27.29■■□□□ 1.96
SPTBN2-206ENST00000530775 ABCC9O60706 1549 aa27.1■■□□□ 1.93
SPTBN2-206ENST00000530775 RB1CC1Q8TDY2 1594 aa25.86■■□□□ 1.73
SPTBN2-206ENST00000530775 NACADO15069 1562 aa25.73■■□□□ 1.71
SPTBN2-206ENST00000530775 DCAF8L2P0C7V8 631 aa25.69■■□□□ 1.7
SPTBN2-206ENST00000530775 MYO15BQ96JP2 1530 aa25.44■■□□□ 1.66
SPTBN2-206ENST00000530775 ZCCHC6Q5VYS8 1495 aaKnown RBP25.4■■□□□ 1.66
SPTBN2-206ENST00000530775 UNC13AQ9UPW8 1703 aa25.29■■□□□ 1.64
SPTBN2-206ENST00000530775 PABPN1Q86U42 306 aaKnown RBP eCLIP25.27■■□□□ 1.64
SPTBN2-206ENST00000530775 DCAF1Q9Y4B6 1507 aa25.22■■□□□ 1.63
SPTBN2-206ENST00000530775 DNAJC5BQ9UF47 199 aa25.18■■□□□ 1.62
SPTBN2-206ENST00000530775 BICRAQ9NZM4 1560 aa25.14■■□□□ 1.61
SPTBN2-206ENST00000530775 SCRIBQ14160 1630 aa24.97■■□□□ 1.59
SPTBN2-206ENST00000530775 SHROOM4Q9ULL8 1493 aa24.75■■□□□ 1.55
SPTBN2-206ENST00000530775 EIF4G1Q04637 1599 aaKnown RBP24.49■■□□□ 1.51
SPTBN2-206ENST00000530775 CC2D2AQ9P2K1 1620 aa24.47■■□□□ 1.51
SPTBN2-206ENST00000530775 CECR2Q9BXF3 1484 aa24.36■■□□□ 1.49
SPTBN2-206ENST00000530775 SMARCA4P51532 1647 aa23.8■■□□□ 1.4
SPTBN2-206ENST00000530775 NCAPD3P42695 1498 aa23.75■■□□□ 1.39
SPTBN2-206ENST00000530775 ATAD2BQ9ULI0 1458 aa23.75■■□□□ 1.39
SPTBN2-206ENST00000530775 BAZ1AQ9NRL2 1556 aaPredicted RBP23.69■■□□□ 1.38
SPTBN2-206ENST00000530775 SMARCA2P51531 1590 aa23.67■■□□□ 1.38
SPTBN2-206ENST00000530775 HMGXB3Q12766 1538 aa23.62■■□□□ 1.37
SPTBN2-206ENST00000530775 MROH2BQ7Z745 1585 aa23.59■■□□□ 1.37
SPTBN2-206ENST00000530775 BAZ1BQ9UIG0 1483 aaKnown RBP23.54■■□□□ 1.36
SPTBN2-206ENST00000530775 PEG3Q9GZU2 1588 aa23.53■■□□□ 1.36
SPTBN2-206ENST00000530775 NESP48681 1621 aa23.37■■□□□ 1.33
SPTBN2-206ENST00000530775 ERCC6Q03468 1493 aa23.36■■□□□ 1.33
SPTBN2-206ENST00000530775 WIZO95785 1651 aa23.32■■□□□ 1.32
SPTBN2-206ENST00000530775 CUX2O14529 1486 aa23.19■■□□□ 1.3
SPTBN2-206ENST00000530775 LAMC3Q9Y6N6 1575 aa23.18■■□□□ 1.3
SPTBN2-206ENST00000530775 RSF1Q96T23 1441 aaPredicted RBP23.17■■□□□ 1.3
SPTBN2-206ENST00000530775 THOC2Q8NI27 1593 aaKnown RBP23.06■■□□□ 1.28
SPTBN2-206ENST00000530775 KIF21AQ7Z4S6 1674 aa23.06■■□□□ 1.28
SPTBN2-206ENST00000530775 CADPSQ9ULU8 1353 aa23.05■■□□□ 1.28
SPTBN2-206ENST00000530775 PDS5BQ9NTI5 1447 aa23.03■■□□□ 1.28
SPTBN2-206ENST00000530775 TOP2AP11388 1531 aaKnown RBP23.03■■□□□ 1.28
SPTBN2-206ENST00000530775 DNAJC5Q9H3Z4 198 aa22.87■■□□□ 1.25
SPTBN2-206ENST00000530775 CFTRP13569 1480 aa22.85■■□□□ 1.25
SPTBN2-206ENST00000530775 MRC2Q9UBG0 1479 aa22.85■■□□□ 1.25
SPTBN2-206ENST00000530775 FANCD2Q9BXW9 1451 aa22.82■■□□□ 1.24
SPTBN2-206ENST00000530775 CEP164Q9UPV0 1460 aa22.81■■□□□ 1.24
SPTBN2-206ENST00000530775 WDR62O43379 1518 aa22.79■■□□□ 1.24
SPTBN2-206ENST00000530775 CCDC88BA6NC98 1476 aa22.76■■□□□ 1.23
SPTBN2-206ENST00000530775 URB2Q14146 1524 aaKnown RBP22.63■■□□□ 1.21
SPTBN2-206ENST00000530775 PRDM2Q13029 1718 aa22.63■■□□□ 1.21
SPTBN2-206ENST00000530775 TOPBP1Q92547 1522 aa22.41■■□□□ 1.18
SPTBN2-206ENST00000530775 SUPT5HO00267 1087 aaKnown RBP22.36■■□□□ 1.17
SPTBN2-206ENST00000530775 DNMBPQ6XZF7 1577 aa22.35■■□□□ 1.17
SPTBN2-206ENST00000530775 IFT140Q96RY7 1462 aa22.34■■□□□ 1.17
SPTBN2-206ENST00000530775 ZNF608Q9ULD9 1512 aaPredicted RBP22.32■■□□□ 1.16
SPTBN2-206ENST00000530775 ABCC8Q09428 1581 aa22.31■■□□□ 1.16
SPTBN2-206ENST00000530775 POLA1P09884 1462 aaPredicted RBP22.21■■□□□ 1.15
SPTBN2-206ENST00000530775 EIF4G3O43432 1585 aaKnown RBP22.21■■□□□ 1.15
SPTBN2-206ENST00000530775 TARBP1Q13395 1621 aaKnown RBP22.2■■□□□ 1.15
SPTBN2-206ENST00000530775 OSCARQ8IYS5 282 aa22.15■■□□□ 1.14
SPTBN2-206ENST00000530775 CUX1P39880 1505 aa22.15■■□□□ 1.14
SPTBN2-206ENST00000530775 RAD54L2Q9Y4B4 1467 aa22.15■■□□□ 1.14
SPTBN2-206ENST00000530775 AQRO60306 1485 aaKnown RBP eCLIP22.14■■□□□ 1.13
SPTBN2-206ENST00000530775 FGD5Q6ZNL6 1462 aa22.12■■□□□ 1.13
SPTBN2-206ENST00000530775 SOGA1O94964 1423 aa22.09■■□□□ 1.13
SPTBN2-206ENST00000530775 TDRD9Q8NDG6 1382 aaKnown RBP22.04■■□□□ 1.12
SPTBN2-206ENST00000530775 TRIM41Q8WV44 630 aa22.03■■□□□ 1.12
SPTBN2-206ENST00000530775 CHD1O14646 1710 aa21.97■■□□□ 1.11
SPTBN2-206ENST00000530775 WDR97A6NE52 1622 aa21.94■■□□□ 1.1
SPTBN2-206ENST00000530775 SNAPC4Q5SXM2 1469 aa21.93■■□□□ 1.1
SPTBN2-206ENST00000530775 FBLN2P98095 1184 aa21.92■■□□□ 1.1
SPTBN2-206ENST00000530775 RIMBP3CA6NJZ7 1639 aa21.9■■□□□ 1.1
SPTBN2-206ENST00000530775 RIMBP3BA6NNM3 1639 aa21.9■■□□□ 1.1
SPTBN2-206ENST00000530775 RIMBP3Q9UFD9 1639 aa21.9■■□□□ 1.1
SPTBN2-206ENST00000530775 GRIN2BQ13224 1484 aa21.87■■□□□ 1.09
SPTBN2-206ENST00000530775 SYNJ1O43426 1573 aa21.87■■□□□ 1.09
SPTBN2-206ENST00000530775 WRNQ14191 1432 aaPredicted RBP eCLIP21.86■■□□□ 1.09
SPTBN2-206ENST00000530775 ARHGEF11O15085 1522 aa21.85■■□□□ 1.09
SPTBN2-206ENST00000530775 ABCA10Q8WWZ4 1543 aa21.85■■□□□ 1.09
SPTBN2-206ENST00000530775 MAGI1Q96QZ7 1491 aaPredicted RBP21.84■■□□□ 1.09
SPTBN2-206ENST00000530775 TOP2BQ02880 1626 aa21.84■■□□□ 1.09
SPTBN2-206ENST00000530775 BIVM-ERCC5R4GMW8 1640 aa21.84■■□□□ 1.09
SPTBN2-206ENST00000530775 GAPVD1Q14C86 1478 aa21.83■■□□□ 1.09
SPTBN2-206ENST00000530775 ABCA5Q8WWZ7 1642 aa21.82■■□□□ 1.08
SPTBN2-206ENST00000530775 PBRM1Q86U86 1689 aa21.82■■□□□ 1.08
SPTBN2-206ENST00000530775 CHMP7Q8WUX9 453 aaPredicted RBP21.78■■□□□ 1.08
SPTBN2-206ENST00000530775 SYNJ2O15056 1496 aa21.77■■□□□ 1.08
SPTBN2-206ENST00000530775 CLASP1Q7Z460 1538 aa21.73■■□□□ 1.07
SPTBN2-206ENST00000530775 ARAP1Q96P48 1450 aa21.68■■□□□ 1.06
SPTBN2-206ENST00000530775 CYB5RLQ6IPT4 315 aa21.65■■□□□ 1.06
SPTBN2-206ENST00000530775 ADAMTS12P58397 1594 aa21.65■■□□□ 1.06
SPTBN2-206ENST00000530775 GRIN2AQ12879 1464 aa21.6■■□□□ 1.05
SPTBN2-206ENST00000530775 ERICH3Q5RHP9 1530 aa21.57■■□□□ 1.04
SPTBN2-206ENST00000530775 FHAD1B1AJZ9 1412 aa21.55■■□□□ 1.04
SPTBN2-206ENST00000530775 CEP170Q5SW79 1584 aa21.54■■□□□ 1.04
SPTBN2-206ENST00000530775 NUP160Q12769 1436 aa21.51■■□□□ 1.03
SPTBN2-206ENST00000530775 ERCC6L2Q5T890 1561 aa21.45■■□□□ 1.02
SPTBN2-206ENST00000530775 KIF27Q86VH2 1401 aa21.4■■□□□ 1.02
SPTBN2-206ENST00000530775 SHROOM2Q13796 1616 aa21.39■■□□□ 1.01
SPTBN2-206ENST00000530775 IGF1RP08069 1367 aa21.36■■□□□ 1.01
SPTBN2-206ENST00000530775 RUSC2Q8N2Y8 1516 aa21.34■■□□□ 1.01
SPTBN2-206ENST00000530775 TRHP20396 242 aaPredicted RBP21.33■■□□□ 1.01
SPTBN2-206ENST00000530775 CUL7Q14999 1698 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms