RNA–Protein interactions for RNA: ENST00000530754.5

ALKBH3-206, Transcript of alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, humanhuman

TSL 5

Gene ALKBH3, Length 582 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH3-206ENST00000530754 NISCHQ9Y2I1 1504 aa20.13■□□□□ 0.81
ALKBH3-206ENST00000530754 CCDC180Q9P1Z9 1646 aa17.94■□□□□ 0.46
ALKBH3-206ENST00000530754 ABCC9O60706 1549 aa17.56■□□□□ 0.4
ALKBH3-206ENST00000530754 RB1CC1Q8TDY2 1594 aa16.84■□□□□ 0.29
ALKBH3-206ENST00000530754 DCAF8L2P0C7V8 631 aa16.83■□□□□ 0.28
ALKBH3-206ENST00000530754 NACADO15069 1562 aa16.79■□□□□ 0.28
ALKBH3-206ENST00000530754 ZCCHC6Q5VYS8 1495 aaKnown RBP16.78■□□□□ 0.28
ALKBH3-206ENST00000530754 UNC13AQ9UPW8 1703 aa16.7■□□□□ 0.26
ALKBH3-206ENST00000530754 MYO15BQ96JP2 1530 aa16.62■□□□□ 0.25
ALKBH3-206ENST00000530754 DCAF1Q9Y4B6 1507 aa16.59■□□□□ 0.25
ALKBH3-206ENST00000530754 AEBP2Q6ZN18 517 aaPredicted RBP16.53■□□□□ 0.24
ALKBH3-206ENST00000530754 SCRIBQ14160 1630 aa16.45■□□□□ 0.22
ALKBH3-206ENST00000530754 BICRAQ9NZM4 1560 aa16.41■□□□□ 0.22
ALKBH3-206ENST00000530754 PABPN1Q86U42 306 aaKnown RBP eCLIP16.39■□□□□ 0.21
ALKBH3-206ENST00000530754 DNAJC5BQ9UF47 199 aa16.1■□□□□ 0.17
ALKBH3-206ENST00000530754 SHROOM4Q9ULL8 1493 aa16.04■□□□□ 0.16
ALKBH3-206ENST00000530754 EIF4G1Q04637 1599 aaKnown RBP15.94■□□□□ 0.14
ALKBH3-206ENST00000530754 CC2D2AQ9P2K1 1620 aa15.91■□□□□ 0.14
ALKBH3-206ENST00000530754 CHIC1Q5VXU3 224 aa15.82■□□□□ 0.12
ALKBH3-206ENST00000530754 CECR2Q9BXF3 1484 aa15.74■□□□□ 0.11
ALKBH3-206ENST00000530754 SMARCA4P51532 1647 aa15.68■□□□□ 0.1
ALKBH3-206ENST00000530754 BAZ1AQ9NRL2 1556 aaPredicted RBP15.59■□□□□ 0.09
ALKBH3-206ENST00000530754 MROH2BQ7Z745 1585 aa15.58■□□□□ 0.08
ALKBH3-206ENST00000530754 ATAD2BQ9ULI0 1458 aa15.52■□□□□ 0.07
ALKBH3-206ENST00000530754 SMARCA2P51531 1590 aa15.49■□□□□ 0.07
ALKBH3-206ENST00000530754 WIZO95785 1651 aa15.48■□□□□ 0.07
ALKBH3-206ENST00000530754 NCAPD3P42695 1498 aa15.46■□□□□ 0.07
ALKBH3-206ENST00000530754 PEG3Q9GZU2 1588 aa15.45■□□□□ 0.06
ALKBH3-206ENST00000530754 HMGXB3Q12766 1538 aa15.43■□□□□ 0.06
ALKBH3-206ENST00000530754 BAZ1BQ9UIG0 1483 aaKnown RBP15.4■□□□□ 0.06
ALKBH3-206ENST00000530754 RSF1Q96T23 1441 aaPredicted RBP15.34■□□□□ 0.05
ALKBH3-206ENST00000530754 NESP48681 1621 aa15.24■□□□□ 0.03
ALKBH3-206ENST00000530754 TOP2AP11388 1531 aaKnown RBP15.21■□□□□ 0.03
ALKBH3-206ENST00000530754 KIF21AQ7Z4S6 1674 aa15.14■□□□□ 0.01
ALKBH3-206ENST00000530754 LAMC3Q9Y6N6 1575 aa15.11■□□□□ 0.01
ALKBH3-206ENST00000530754 ERCC6Q03468 1493 aa15.08■□□□□ 0.01
ALKBH3-206ENST00000530754 PRDM2Q13029 1718 aa15.04■□□□□ -0
ALKBH3-206ENST00000530754 CCDC88BA6NC98 1476 aa15.02■□□□□ -0
ALKBH3-206ENST00000530754 CADPSQ9ULU8 1353 aa15.01□□□□□ -0.01
ALKBH3-206ENST00000530754 THOC2Q8NI27 1593 aaKnown RBP15□□□□□ -0.01
ALKBH3-206ENST00000530754 SUPT5HO00267 1087 aaKnown RBP14.99□□□□□ -0.01
ALKBH3-206ENST00000530754 CFTRP13569 1480 aa14.95□□□□□ -0.02
ALKBH3-206ENST00000530754 PDS5BQ9NTI5 1447 aa14.93□□□□□ -0.02
ALKBH3-206ENST00000530754 FANCD2Q9BXW9 1451 aa14.89□□□□□ -0.03
ALKBH3-206ENST00000530754 CEP164Q9UPV0 1460 aa14.88□□□□□ -0.03
ALKBH3-206ENST00000530754 CUX2O14529 1486 aa14.87□□□□□ -0.03
ALKBH3-206ENST00000530754 MRC2Q9UBG0 1479 aa14.84□□□□□ -0.03
ALKBH3-206ENST00000530754 WDR62O43379 1518 aa14.82□□□□□ -0.04
ALKBH3-206ENST00000530754 URB2Q14146 1524 aaKnown RBP14.79□□□□□ -0.04
ALKBH3-206ENST00000530754 TOPBP1Q92547 1522 aa14.68□□□□□ -0.06
ALKBH3-206ENST00000530754 DNMBPQ6XZF7 1577 aa14.67□□□□□ -0.06
ALKBH3-206ENST00000530754 CUX1P39880 1505 aa14.61□□□□□ -0.07
ALKBH3-206ENST00000530754 ABCC8Q09428 1581 aa14.58□□□□□ -0.08
ALKBH3-206ENST00000530754 TARBP1Q13395 1621 aaKnown RBP14.57□□□□□ -0.08
ALKBH3-206ENST00000530754 ZNF608Q9ULD9 1512 aaPredicted RBP14.56□□□□□ -0.08
ALKBH3-206ENST00000530754 POLA1P09884 1462 aaPredicted RBP14.55□□□□□ -0.08
ALKBH3-206ENST00000530754 EIF4G3O43432 1585 aaKnown RBP14.53□□□□□ -0.08
ALKBH3-206ENST00000530754 FGD5Q6ZNL6 1462 aa14.53□□□□□ -0.08
ALKBH3-206ENST00000530754 SYNJ1O43426 1573 aa14.52□□□□□ -0.08
ALKBH3-206ENST00000530754 IFT140Q96RY7 1462 aa14.52□□□□□ -0.08
ALKBH3-206ENST00000530754 RAD54L2Q9Y4B4 1467 aa14.52□□□□□ -0.08
ALKBH3-206ENST00000530754 WDR97A6NE52 1622 aa14.51□□□□□ -0.09
ALKBH3-206ENST00000530754 BIVM-ERCC5R4GMW8 1640 aa14.51□□□□□ -0.09
ALKBH3-206ENST00000530754 TOP2BQ02880 1626 aa14.47□□□□□ -0.09
ALKBH3-206ENST00000530754 SOGA1O94964 1423 aa14.45□□□□□ -0.1
ALKBH3-206ENST00000530754 WRNQ14191 1432 aaPredicted RBP eCLIP14.45□□□□□ -0.1
ALKBH3-206ENST00000530754 AQRO60306 1485 aaKnown RBP eCLIP14.44□□□□□ -0.12e-6■■■■■ 36
ALKBH3-206ENST00000530754 CHD1O14646 1710 aa14.44□□□□□ -0.1
ALKBH3-206ENST00000530754 PBRM1Q86U86 1689 aa14.42□□□□□ -0.1
ALKBH3-206ENST00000530754 TDRD9Q8NDG6 1382 aaKnown RBP14.41□□□□□ -0.1
ALKBH3-206ENST00000530754 DNAJC5Q9H3Z4 198 aa14.39□□□□□ -0.11
ALKBH3-206ENST00000530754 ABCA5Q8WWZ7 1642 aa14.37□□□□□ -0.11
ALKBH3-206ENST00000530754 ABCA10Q8WWZ4 1543 aa14.34□□□□□ -0.11
ALKBH3-206ENST00000530754 SNAPC4Q5SXM2 1469 aa14.31□□□□□ -0.12
ALKBH3-206ENST00000530754 GAPVD1Q14C86 1478 aa14.31□□□□□ -0.12
ALKBH3-206ENST00000530754 GRIN2BQ13224 1484 aa14.27□□□□□ -0.12
ALKBH3-206ENST00000530754 FBLN2P98095 1184 aa14.25□□□□□ -0.13
ALKBH3-206ENST00000530754 MAGI1Q96QZ7 1491 aaPredicted RBP14.24□□□□□ -0.13
ALKBH3-206ENST00000530754 ADAMTS12P58397 1594 aa14.23□□□□□ -0.13
ALKBH3-206ENST00000530754 OSCARQ8IYS5 282 aa14.23□□□□□ -0.13
ALKBH3-206ENST00000530754 SYNJ2O15056 1496 aa14.19□□□□□ -0.14
ALKBH3-206ENST00000530754 ERICH3Q5RHP9 1530 aa14.17□□□□□ -0.14
ALKBH3-206ENST00000530754 RIMBP3CA6NJZ7 1639 aa14.16□□□□□ -0.14
ALKBH3-206ENST00000530754 RIMBP3BA6NNM3 1639 aa14.16□□□□□ -0.14
ALKBH3-206ENST00000530754 RIMBP3Q9UFD9 1639 aa14.16□□□□□ -0.14
ALKBH3-206ENST00000530754 CHMP7Q8WUX9 453 aaPredicted RBP14.16□□□□□ -0.14
ALKBH3-206ENST00000530754 SENP3Q9H4L4 574 aaPredicted RBP14.15□□□□□ -0.14
ALKBH3-206ENST00000530754 CLASP1Q7Z460 1538 aa14.14□□□□□ -0.15
ALKBH3-206ENST00000530754 RUSC2Q8N2Y8 1516 aa14.13□□□□□ -0.15
ALKBH3-206ENST00000530754 CEP170Q5SW79 1584 aa14.13□□□□□ -0.15
ALKBH3-206ENST00000530754 GRIN2AQ12879 1464 aa14.12□□□□□ -0.15
ALKBH3-206ENST00000530754 KIF27Q86VH2 1401 aa14.11□□□□□ -0.15
ALKBH3-206ENST00000530754 FHAD1B1AJZ9 1412 aa14.1□□□□□ -0.15
ALKBH3-206ENST00000530754 CUL7Q14999 1698 aa14.1□□□□□ -0.15
ALKBH3-206ENST00000530754 ARHGEF11O15085 1522 aa14.1□□□□□ -0.15
ALKBH3-206ENST00000530754 TRIM41Q8WV44 630 aa14.09□□□□□ -0.15
ALKBH3-206ENST00000530754 IGF1RP08069 1367 aa14.07□□□□□ -0.16
ALKBH3-206ENST00000530754 NUP160Q12769 1436 aa14.03□□□□□ -0.16
ALKBH3-206ENST00000530754 ERCC6L2Q5T890 1561 aa14.03□□□□□ -0.16
ALKBH3-206ENST00000530754 SHROOM2Q13796 1616 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms