RNA–Protein interactions for RNA: ENST00000530734.1

PPP6R3-221, Transcript of protein phosphatase 6 regulatory subunit 3, humanhuman

TSL 3

Gene PPP6R3, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R3-221ENST00000530734 NISCHQ9Y2I1 1504 aa27.97■■■□□ 2.07
PPP6R3-221ENST00000530734 ABCC9O60706 1549 aa25.43■■□□□ 1.66
PPP6R3-221ENST00000530734 CCDC180Q9P1Z9 1646 aa24.97■■□□□ 1.59
PPP6R3-221ENST00000530734 DNAJC5BQ9UF47 199 aa24.22■■□□□ 1.47
PPP6R3-221ENST00000530734 RB1CC1Q8TDY2 1594 aa23.96■■□□□ 1.43
PPP6R3-221ENST00000530734 DCAF8L2P0C7V8 631 aa23.94■■□□□ 1.42
PPP6R3-221ENST00000530734 PABPN1Q86U42 306 aaKnown RBP eCLIP23.8■■□□□ 1.4
PPP6R3-221ENST00000530734 NACADO15069 1562 aa23.77■■□□□ 1.4
PPP6R3-221ENST00000530734 UNC13AQ9UPW8 1703 aa23.36■■□□□ 1.33
PPP6R3-221ENST00000530734 BICRAQ9NZM4 1560 aa23.35■■□□□ 1.33
PPP6R3-221ENST00000530734 MYO15BQ96JP2 1530 aa23.35■■□□□ 1.33
PPP6R3-221ENST00000530734 ZCCHC6Q5VYS8 1495 aaKnown RBP23.09■■□□□ 1.29
PPP6R3-221ENST00000530734 DCAF1Q9Y4B6 1507 aa23■■□□□ 1.27
PPP6R3-221ENST00000530734 SCRIBQ14160 1630 aa22.91■■□□□ 1.26
PPP6R3-221ENST00000530734 CECR2Q9BXF3 1484 aa22.91■■□□□ 1.26
PPP6R3-221ENST00000530734 CC2D2AQ9P2K1 1620 aa22.87■■□□□ 1.25
PPP6R3-221ENST00000530734 SHROOM4Q9ULL8 1493 aa22.86■■□□□ 1.25
PPP6R3-221ENST00000530734 EIF4G1Q04637 1599 aaKnown RBP22.76■■□□□ 1.23
PPP6R3-221ENST00000530734 DNAJC5Q9H3Z4 198 aa22.29■■□□□ 1.16
PPP6R3-221ENST00000530734 NCAPD3P42695 1498 aa22.04■■□□□ 1.12
PPP6R3-221ENST00000530734 ATAD2BQ9ULI0 1458 aa21.96■■□□□ 1.11
PPP6R3-221ENST00000530734 ERCC6Q03468 1493 aa21.91■■□□□ 1.1
PPP6R3-221ENST00000530734 CUX2O14529 1486 aa21.88■■□□□ 1.09
PPP6R3-221ENST00000530734 NESP48681 1621 aa21.81■■□□□ 1.08
PPP6R3-221ENST00000530734 SMARCA4P51532 1647 aa21.79■■□□□ 1.08
PPP6R3-221ENST00000530734 SMARCA2P51531 1590 aa21.78■■□□□ 1.08
PPP6R3-221ENST00000530734 HMGXB3Q12766 1538 aa21.74■■□□□ 1.07
PPP6R3-221ENST00000530734 BAZ1BQ9UIG0 1483 aaKnown RBP21.69■■□□□ 1.06
PPP6R3-221ENST00000530734 BAZ1AQ9NRL2 1556 aaPredicted RBP21.65■■□□□ 1.06
PPP6R3-221ENST00000530734 MROH2BQ7Z745 1585 aa21.6■■□□□ 1.05
PPP6R3-221ENST00000530734 PEG3Q9GZU2 1588 aa21.55■■□□□ 1.04
PPP6R3-221ENST00000530734 THOC2Q8NI27 1593 aaKnown RBP21.45■■□□□ 1.02
PPP6R3-221ENST00000530734 LAMC3Q9Y6N6 1575 aa21.45■■□□□ 1.02
PPP6R3-221ENST00000530734 PDS5BQ9NTI5 1447 aa21.45■■□□□ 1.02
PPP6R3-221ENST00000530734 CADPSQ9ULU8 1353 aa21.41■■□□□ 1.02
PPP6R3-221ENST00000530734 KIF21AQ7Z4S6 1674 aa21.35■■□□□ 1.01
PPP6R3-221ENST00000530734 TRIM41Q8WV44 630 aa21.27■■□□□ 1
PPP6R3-221ENST00000530734 WIZO95785 1651 aa21.27■■□□□ 1
PPP6R3-221ENST00000530734 MRC2Q9UBG0 1479 aa21.24■□□□□ 0.99
PPP6R3-221ENST00000530734 WDR62O43379 1518 aa21.15■□□□□ 0.98
PPP6R3-221ENST00000530734 FANCD2Q9BXW9 1451 aa21.12■□□□□ 0.97
PPP6R3-221ENST00000530734 RSF1Q96T23 1441 aaPredicted RBP21.12■□□□□ 0.97
PPP6R3-221ENST00000530734 CEP164Q9UPV0 1460 aa21.11■□□□□ 0.97
PPP6R3-221ENST00000530734 CFTRP13569 1480 aa21.07■□□□□ 0.96
PPP6R3-221ENST00000530734 OSCARQ8IYS5 282 aa21.03■□□□□ 0.96
PPP6R3-221ENST00000530734 URB2Q14146 1524 aaKnown RBP20.97■□□□□ 0.95
PPP6R3-221ENST00000530734 TOP2AP11388 1531 aaKnown RBP20.94■□□□□ 0.94
PPP6R3-221ENST00000530734 CCDC88BA6NC98 1476 aa20.83■□□□□ 0.93
PPP6R3-221ENST00000530734 ZNF608Q9ULD9 1512 aaPredicted RBP20.79■□□□□ 0.92
PPP6R3-221ENST00000530734 IFT140Q96RY7 1462 aa20.71■□□□□ 0.91
PPP6R3-221ENST00000530734 TOPBP1Q92547 1522 aa20.68■□□□□ 0.9
PPP6R3-221ENST00000530734 RIMBP3CA6NJZ7 1639 aa20.61■□□□□ 0.89
PPP6R3-221ENST00000530734 RIMBP3BA6NNM3 1639 aa20.61■□□□□ 0.89
PPP6R3-221ENST00000530734 RIMBP3Q9UFD9 1639 aa20.61■□□□□ 0.89
PPP6R3-221ENST00000530734 CYB5RLQ6IPT4 315 aa20.61■□□□□ 0.89
PPP6R3-221ENST00000530734 AQRO60306 1485 aaKnown RBP eCLIP20.61■□□□□ 0.892e-11■■■■■ 27.6
PPP6R3-221ENST00000530734 PRDM2Q13029 1718 aa20.58■□□□□ 0.88
PPP6R3-221ENST00000530734 FBLN2P98095 1184 aa20.57■□□□□ 0.88
PPP6R3-221ENST00000530734 ABCC8Q09428 1581 aa20.56■□□□□ 0.88
PPP6R3-221ENST00000530734 ARHGEF11O15085 1522 aa20.56■□□□□ 0.88
PPP6R3-221ENST00000530734 DNMBPQ6XZF7 1577 aa20.52■□□□□ 0.88
PPP6R3-221ENST00000530734 EIF4G3O43432 1585 aaKnown RBP20.5■□□□□ 0.87
PPP6R3-221ENST00000530734 AEBP2Q6ZN18 517 aaPredicted RBP20.49■□□□□ 0.87
PPP6R3-221ENST00000530734 RAD54L2Q9Y4B4 1467 aa20.48■□□□□ 0.87
PPP6R3-221ENST00000530734 TDRD9Q8NDG6 1382 aaKnown RBP20.47■□□□□ 0.87
PPP6R3-221ENST00000530734 POLA1P09884 1462 aaPredicted RBP20.47■□□□□ 0.87
PPP6R3-221ENST00000530734 TARBP1Q13395 1621 aaKnown RBP20.46■□□□□ 0.87
PPP6R3-221ENST00000530734 SOGA1O94964 1423 aa20.44■□□□□ 0.86
PPP6R3-221ENST00000530734 TRHP20396 242 aaPredicted RBP20.4■□□□□ 0.86
PPP6R3-221ENST00000530734 ARAP1Q96P48 1450 aa20.37■□□□□ 0.85
PPP6R3-221ENST00000530734 CHD1O14646 1710 aa20.36■□□□□ 0.85
PPP6R3-221ENST00000530734 CHMP7Q8WUX9 453 aaPredicted RBP20.35■□□□□ 0.85
PPP6R3-221ENST00000530734 FGD5Q6ZNL6 1462 aa20.31■□□□□ 0.84
PPP6R3-221ENST00000530734 SNAPC4Q5SXM2 1469 aa20.3■□□□□ 0.84
PPP6R3-221ENST00000530734 CUX1P39880 1505 aa20.28■□□□□ 0.84
PPP6R3-221ENST00000530734 GRIN2BQ13224 1484 aa20.21■□□□□ 0.83
PPP6R3-221ENST00000530734 MAGI1Q96QZ7 1491 aaPredicted RBP20.18■□□□□ 0.82
PPP6R3-221ENST00000530734 CLASP1Q7Z460 1538 aa20.18■□□□□ 0.82
PPP6R3-221ENST00000530734 SUPT5HO00267 1087 aaKnown RBP20.18■□□□□ 0.82
PPP6R3-221ENST00000530734 SYNJ2O15056 1496 aa20.15■□□□□ 0.82
PPP6R3-221ENST00000530734 GAPVD1Q14C86 1478 aa20.13■□□□□ 0.81
PPP6R3-221ENST00000530734 SYNJ1O43426 1573 aa20.12■□□□□ 0.81
PPP6R3-221ENST00000530734 WDR97A6NE52 1622 aa20.11■□□□□ 0.81
PPP6R3-221ENST00000530734 ABCA10Q8WWZ4 1543 aa20.05■□□□□ 0.8
PPP6R3-221ENST00000530734 WRNQ14191 1432 aaPredicted RBP eCLIP19.97■□□□□ 0.79
PPP6R3-221ENST00000530734 PBRM1Q86U86 1689 aa19.97■□□□□ 0.79
PPP6R3-221ENST00000530734 ABCA5Q8WWZ7 1642 aa19.96■□□□□ 0.79
PPP6R3-221ENST00000530734 ERCC6L2Q5T890 1561 aa19.95■□□□□ 0.78
PPP6R3-221ENST00000530734 GRIN2AQ12879 1464 aa19.93■□□□□ 0.78
PPP6R3-221ENST00000530734 NUP160Q12769 1436 aa19.89■□□□□ 0.77
PPP6R3-221ENST00000530734 FHAD1B1AJZ9 1412 aa19.86■□□□□ 0.77
PPP6R3-221ENST00000530734 CEP170Q5SW79 1584 aa19.86■□□□□ 0.77
PPP6R3-221ENST00000530734 ADAMTS12P58397 1594 aa19.83■□□□□ 0.77
PPP6R3-221ENST00000530734 JPH4Q96JJ6 628 aa19.83■□□□□ 0.77
PPP6R3-221ENST00000530734 TOP2BQ02880 1626 aa19.82■□□□□ 0.76
PPP6R3-221ENST00000530734 PRG4Q92954 1404 aaPredicted RBP19.77■□□□□ 0.76
PPP6R3-221ENST00000530734 BIVM-ERCC5R4GMW8 1640 aa19.76■□□□□ 0.75
PPP6R3-221ENST00000530734 ERICH3Q5RHP9 1530 aa19.75■□□□□ 0.75
PPP6R3-221ENST00000530734 SHROOM2Q13796 1616 aa19.73■□□□□ 0.75
PPP6R3-221ENST00000530734 FAM69CQ0P6D2 419 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms