RNA–Protein interactions for RNA: ENST00000530673.1

VPS51-208, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 633 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-208ENST00000530673 NISCHQ9Y2I1 1504 aa43.46■■■■■ 4.55
VPS51-208ENST00000530673 CCDC180Q9P1Z9 1646 aa38.91■■■■□ 3.82
VPS51-208ENST00000530673 ABCC9O60706 1549 aa38.64■■■■□ 3.78
VPS51-208ENST00000530673 RB1CC1Q8TDY2 1594 aa36.91■■■■□ 3.5
VPS51-208ENST00000530673 NACADO15069 1562 aa36.72■■■■□ 3.47
VPS51-208ENST00000530673 DCAF8L2P0C7V8 631 aa36.51■■■■□ 3.44
VPS51-208ENST00000530673 MYO15BQ96JP2 1530 aa36.32■■■■□ 3.4
VPS51-208ENST00000530673 UNC13AQ9UPW8 1703 aa36.09■■■■□ 3.37
VPS51-208ENST00000530673 ZCCHC6Q5VYS8 1495 aaKnown RBP36.07■■■■□ 3.37
VPS51-208ENST00000530673 DNAJC5BQ9UF47 199 aa36.07■■■■□ 3.36
VPS51-208ENST00000530673 PABPN1Q86U42 306 aaKnown RBP eCLIP36■■■■□ 3.35
VPS51-208ENST00000530673 DCAF1Q9Y4B6 1507 aa35.93■■■■□ 3.34
VPS51-208ENST00000530673 BICRAQ9NZM4 1560 aa35.85■■■■□ 3.33
VPS51-208ENST00000530673 SCRIBQ14160 1630 aa35.43■■■■□ 3.26
VPS51-208ENST00000530673 SHROOM4Q9ULL8 1493 aa35.39■■■■□ 3.26
VPS51-208ENST00000530673 CC2D2AQ9P2K1 1620 aa34.95■■■■□ 3.18
VPS51-208ENST00000530673 EIF4G1Q04637 1599 aaKnown RBP34.93■■■■□ 3.18
VPS51-208ENST00000530673 CECR2Q9BXF3 1484 aa34.79■■■■□ 3.16
VPS51-208ENST00000530673 NCAPD3P42695 1498 aa33.9■■■■□ 3.02
VPS51-208ENST00000530673 SMARCA4P51532 1647 aa33.85■■■■□ 3.01
VPS51-208ENST00000530673 ATAD2BQ9ULI0 1458 aa33.82■■■■□ 3.01
VPS51-208ENST00000530673 SMARCA2P51531 1590 aa33.73■■■□□ 2.99
VPS51-208ENST00000530673 BAZ1AQ9NRL2 1556 aaPredicted RBP33.72■■■□□ 2.99
VPS51-208ENST00000530673 HMGXB3Q12766 1538 aa33.67■■■□□ 2.98
VPS51-208ENST00000530673 PEG3Q9GZU2 1588 aa33.55■■■□□ 2.96
VPS51-208ENST00000530673 BAZ1BQ9UIG0 1483 aaKnown RBP33.49■■■□□ 2.95
VPS51-208ENST00000530673 MROH2BQ7Z745 1585 aa33.48■■■□□ 2.95
VPS51-208ENST00000530673 ERCC6Q03468 1493 aa33.32■■■□□ 2.92
VPS51-208ENST00000530673 NESP48681 1621 aa33.28■■■□□ 2.92
VPS51-208ENST00000530673 CUX2O14529 1486 aa33.23■■■□□ 2.91
VPS51-208ENST00000530673 WIZO95785 1651 aa33.1■■■□□ 2.89
VPS51-208ENST00000530673 LAMC3Q9Y6N6 1575 aa33.09■■■□□ 2.89
VPS51-208ENST00000530673 DNAJC5Q9H3Z4 198 aa32.94■■■□□ 2.86
VPS51-208ENST00000530673 THOC2Q8NI27 1593 aaKnown RBP32.92■■■□□ 2.86
VPS51-208ENST00000530673 PDS5BQ9NTI5 1447 aa32.88■■■□□ 2.85
VPS51-208ENST00000530673 RSF1Q96T23 1441 aaPredicted RBP32.87■■■□□ 2.85
VPS51-208ENST00000530673 CADPSQ9ULU8 1353 aa32.87■■■□□ 2.85
VPS51-208ENST00000530673 KIF21AQ7Z4S6 1674 aa32.86■■■□□ 2.85
VPS51-208ENST00000530673 TOP2AP11388 1531 aaKnown RBP32.69■■■□□ 2.82
VPS51-208ENST00000530673 MRC2Q9UBG0 1479 aa32.58■■■□□ 2.81
VPS51-208ENST00000530673 CFTRP13569 1480 aa32.55■■■□□ 2.8
VPS51-208ENST00000530673 WDR62O43379 1518 aa32.51■■■□□ 2.8
VPS51-208ENST00000530673 CEP164Q9UPV0 1460 aa32.5■■■□□ 2.79
VPS51-208ENST00000530673 FANCD2Q9BXW9 1451 aa32.48■■■□□ 2.79
VPS51-208ENST00000530673 CCDC88BA6NC98 1476 aa32.33■■■□□ 2.77
VPS51-208ENST00000530673 PRDM2Q13029 1718 aa32.25■■■□□ 2.75
VPS51-208ENST00000530673 URB2Q14146 1524 aaKnown RBP32.21■■■□□ 2.75
VPS51-208ENST00000530673 TOPBP1Q92547 1522 aa31.9■■■□□ 2.7
VPS51-208ENST00000530673 ABCC8Q09428 1581 aa31.85■■■□□ 2.69
VPS51-208ENST00000530673 IFT140Q96RY7 1462 aa31.84■■■□□ 2.69
VPS51-208ENST00000530673 DNMBPQ6XZF7 1577 aa31.81■■■□□ 2.68
VPS51-208ENST00000530673 ZNF608Q9ULD9 1512 aaPredicted RBP31.77■■■□□ 2.68
VPS51-208ENST00000530673 OSCARQ8IYS5 282 aa31.73■■■□□ 2.67
VPS51-208ENST00000530673 TARBP1Q13395 1621 aaKnown RBP31.62■■■□□ 2.65
VPS51-208ENST00000530673 EIF4G3O43432 1585 aaKnown RBP31.61■■■□□ 2.65
VPS51-208ENST00000530673 POLA1P09884 1462 aaPredicted RBP31.59■■■□□ 2.65
VPS51-208ENST00000530673 SUPT5HO00267 1087 aaKnown RBP31.54■■■□□ 2.64
VPS51-208ENST00000530673 TRIM41Q8WV44 630 aa31.54■■■□□ 2.64
VPS51-208ENST00000530673 AQRO60306 1485 aaKnown RBP eCLIP31.52■■■□□ 2.647e-7■■□□□ 14.1
VPS51-208ENST00000530673 RAD54L2Q9Y4B4 1467 aa31.46■■■□□ 2.63
VPS51-208ENST00000530673 SOGA1O94964 1423 aa31.45■■■□□ 2.63
VPS51-208ENST00000530673 CUX1P39880 1505 aa31.44■■■□□ 2.62
VPS51-208ENST00000530673 FGD5Q6ZNL6 1462 aa31.43■■■□□ 2.62
VPS51-208ENST00000530673 TDRD9Q8NDG6 1382 aaKnown RBP31.34■■■□□ 2.61
VPS51-208ENST00000530673 CHD1O14646 1710 aa31.33■■■□□ 2.61
VPS51-208ENST00000530673 WDR97A6NE52 1622 aa31.32■■■□□ 2.6
VPS51-208ENST00000530673 RIMBP3CA6NJZ7 1639 aa31.31■■■□□ 2.6
VPS51-208ENST00000530673 RIMBP3BA6NNM3 1639 aa31.31■■■□□ 2.6
VPS51-208ENST00000530673 RIMBP3Q9UFD9 1639 aa31.31■■■□□ 2.6
VPS51-208ENST00000530673 ARHGEF11O15085 1522 aa31.24■■■□□ 2.59
VPS51-208ENST00000530673 FBLN2P98095 1184 aa31.21■■■□□ 2.59
VPS51-208ENST00000530673 SNAPC4Q5SXM2 1469 aa31.2■■■□□ 2.58
VPS51-208ENST00000530673 GRIN2BQ13224 1484 aa31.15■■■□□ 2.58
VPS51-208ENST00000530673 MAGI1Q96QZ7 1491 aaPredicted RBP31.13■■■□□ 2.57
VPS51-208ENST00000530673 ABCA10Q8WWZ4 1543 aa31.1■■■□□ 2.57
VPS51-208ENST00000530673 GAPVD1Q14C86 1478 aa31.07■■■□□ 2.56
VPS51-208ENST00000530673 PBRM1Q86U86 1689 aa31.06■■■□□ 2.56
VPS51-208ENST00000530673 CHMP7Q8WUX9 453 aaPredicted RBP31.04■■■□□ 2.56
VPS51-208ENST00000530673 ABCA5Q8WWZ7 1642 aa31.04■■■□□ 2.56
VPS51-208ENST00000530673 BIVM-ERCC5R4GMW8 1640 aa31.02■■■□□ 2.56
VPS51-208ENST00000530673 SYNJ2O15056 1496 aa31.02■■■□□ 2.56
VPS51-208ENST00000530673 TOP2BQ02880 1626 aa31.01■■■□□ 2.55
VPS51-208ENST00000530673 CLASP1Q7Z460 1538 aa31■■■□□ 2.55
VPS51-208ENST00000530673 WRNQ14191 1432 aaPredicted RBP eCLIP30.99■■■□□ 2.55
VPS51-208ENST00000530673 SYNJ1O43426 1573 aa30.98■■■□□ 2.55
VPS51-208ENST00000530673 CYB5RLQ6IPT4 315 aa30.96■■■□□ 2.55
VPS51-208ENST00000530673 ARAP1Q96P48 1450 aa30.95■■■□□ 2.54
VPS51-208ENST00000530673 ADAMTS12P58397 1594 aa30.77■■■□□ 2.52
VPS51-208ENST00000530673 GRIN2AQ12879 1464 aa30.76■■■□□ 2.51
VPS51-208ENST00000530673 ERICH3Q5RHP9 1530 aa30.71■■■□□ 2.51
VPS51-208ENST00000530673 FHAD1B1AJZ9 1412 aa30.69■■■□□ 2.5
VPS51-208ENST00000530673 NUP160Q12769 1436 aa30.65■■■□□ 2.5
VPS51-208ENST00000530673 CEP170Q5SW79 1584 aa30.64■■■□□ 2.5
VPS51-208ENST00000530673 ERCC6L2Q5T890 1561 aa30.53■■■□□ 2.48
VPS51-208ENST00000530673 TRHP20396 242 aaPredicted RBP30.52■■■□□ 2.48
VPS51-208ENST00000530673 SHROOM2Q13796 1616 aa30.51■■■□□ 2.47
VPS51-208ENST00000530673 KIF27Q86VH2 1401 aa30.39■■■□□ 2.45
VPS51-208ENST00000530673 IGF1RP08069 1367 aa30.37■■■□□ 2.45
VPS51-208ENST00000530673 RUSC2Q8N2Y8 1516 aa30.34■■■□□ 2.45
VPS51-208ENST00000530673 JPH4Q96JJ6 628 aa30.33■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms