RNA–Protein interactions for RNA: ENST00000530631.1

PRPH-203, Transcript of peripherin, humanhuman

TSL 2

Gene PRPH, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH-203ENST00000530631 NISCHQ9Y2I1 1504 aa48.22■■■■■ 5.31
PRPH-203ENST00000530631 CCDC180Q9P1Z9 1646 aa42.96■■■■■ 4.47
PRPH-203ENST00000530631 ABCC9O60706 1549 aa42.36■■■■■ 4.37
PRPH-203ENST00000530631 RB1CC1Q8TDY2 1594 aa40.61■■■■■ 4.09
PRPH-203ENST00000530631 NACADO15069 1562 aa40.49■■■■■ 4.07
PRPH-203ENST00000530631 DCAF8L2P0C7V8 631 aa40.46■■■■■ 4.07
PRPH-203ENST00000530631 MYO15BQ96JP2 1530 aa40.17■■■■■ 4.02
PRPH-203ENST00000530631 ZCCHC6Q5VYS8 1495 aaKnown RBP40.1■■■■■ 4.01
PRPH-203ENST00000530631 DCAF1Q9Y4B6 1507 aa39.89■■■■□ 3.98
PRPH-203ENST00000530631 UNC13AQ9UPW8 1703 aa39.6■■■■□ 3.93
PRPH-203ENST00000530631 PABPN1Q86U42 306 aaKnown RBP eCLIP39.56■■■■□ 3.92
PRPH-203ENST00000530631 BICRAQ9NZM4 1560 aa39.37■■■■□ 3.89
PRPH-203ENST00000530631 SCRIBQ14160 1630 aa39.18■■■■□ 3.86
PRPH-203ENST00000530631 DNAJC5BQ9UF47 199 aa39.16■■■■□ 3.86
PRPH-203ENST00000530631 SHROOM4Q9ULL8 1493 aa38.96■■■■□ 3.83
PRPH-203ENST00000530631 EIF4G1Q04637 1599 aaKnown RBP38.36■■■■□ 3.73
PRPH-203ENST00000530631 CC2D2AQ9P2K1 1620 aa38.27■■■■□ 3.72
PRPH-203ENST00000530631 CECR2Q9BXF3 1484 aa38.09■■■■□ 3.69
PRPH-203ENST00000530631 SMARCA4P51532 1647 aa37.46■■■■□ 3.59
PRPH-203ENST00000530631 NCAPD3P42695 1498 aa37.39■■■■□ 3.58
PRPH-203ENST00000530631 BAZ1AQ9NRL2 1556 aaPredicted RBP37.39■■■■□ 3.58
PRPH-203ENST00000530631 ATAD2BQ9ULI0 1458 aa37.36■■■■□ 3.57
PRPH-203ENST00000530631 SMARCA2P51531 1590 aa37.29■■■■□ 3.56
PRPH-203ENST00000530631 MROH2BQ7Z745 1585 aa37.15■■■■□ 3.54
PRPH-203ENST00000530631 HMGXB3Q12766 1538 aa37.15■■■■□ 3.54
PRPH-203ENST00000530631 PEG3Q9GZU2 1588 aa37.11■■■■□ 3.53
PRPH-203ENST00000530631 BAZ1BQ9UIG0 1483 aaKnown RBP37.03■■■■□ 3.52
PRPH-203ENST00000530631 WIZO95785 1651 aa36.72■■■■□ 3.47
PRPH-203ENST00000530631 RSF1Q96T23 1441 aaPredicted RBP36.65■■■■□ 3.46
PRPH-203ENST00000530631 NESP48681 1621 aa36.56■■■■□ 3.44
PRPH-203ENST00000530631 ERCC6Q03468 1493 aa36.53■■■■□ 3.44
PRPH-203ENST00000530631 LAMC3Q9Y6N6 1575 aa36.42■■■■□ 3.42
PRPH-203ENST00000530631 TOP2AP11388 1531 aaKnown RBP36.33■■■■□ 3.41
PRPH-203ENST00000530631 CADPSQ9ULU8 1353 aa36.29■■■■□ 3.4
PRPH-203ENST00000530631 CUX2O14529 1486 aa36.24■■■■□ 3.39
PRPH-203ENST00000530631 PDS5BQ9NTI5 1447 aa36.22■■■■□ 3.39
PRPH-203ENST00000530631 KIF21AQ7Z4S6 1674 aa36.07■■■■□ 3.37
PRPH-203ENST00000530631 THOC2Q8NI27 1593 aaKnown RBP36.03■■■■□ 3.36
PRPH-203ENST00000530631 CFTRP13569 1480 aa36■■■■□ 3.35
PRPH-203ENST00000530631 CCDC88BA6NC98 1476 aa35.92■■■■□ 3.34
PRPH-203ENST00000530631 FANCD2Q9BXW9 1451 aa35.86■■■■□ 3.33
PRPH-203ENST00000530631 MRC2Q9UBG0 1479 aa35.85■■■■□ 3.33
PRPH-203ENST00000530631 CEP164Q9UPV0 1460 aa35.83■■■■□ 3.33
PRPH-203ENST00000530631 WDR62O43379 1518 aa35.73■■■■□ 3.31
PRPH-203ENST00000530631 PRDM2Q13029 1718 aa35.61■■■■□ 3.29
PRPH-203ENST00000530631 SUPT5HO00267 1087 aaKnown RBP35.53■■■■□ 3.28
PRPH-203ENST00000530631 URB2Q14146 1524 aaKnown RBP35.52■■■■□ 3.28
PRPH-203ENST00000530631 DNAJC5Q9H3Z4 198 aa35.51■■■■□ 3.28
PRPH-203ENST00000530631 TOPBP1Q92547 1522 aa35.25■■■■□ 3.23
PRPH-203ENST00000530631 ABCC8Q09428 1581 aa35.25■■■■□ 3.23
PRPH-203ENST00000530631 DNMBPQ6XZF7 1577 aa35.17■■■■□ 3.22
PRPH-203ENST00000530631 IFT140Q96RY7 1462 aa35.11■■■■□ 3.21
PRPH-203ENST00000530631 ZNF608Q9ULD9 1512 aaPredicted RBP34.96■■■■□ 3.19
PRPH-203ENST00000530631 POLA1P09884 1462 aaPredicted RBP34.93■■■■□ 3.18
PRPH-203ENST00000530631 CUX1P39880 1505 aa34.87■■■■□ 3.17
PRPH-203ENST00000530631 TARBP1Q13395 1621 aaKnown RBP34.87■■■■□ 3.17
PRPH-203ENST00000530631 SOGA1O94964 1423 aa34.81■■■■□ 3.16
PRPH-203ENST00000530631 FGD5Q6ZNL6 1462 aa34.8■■■■□ 3.16
PRPH-203ENST00000530631 RAD54L2Q9Y4B4 1467 aa34.79■■■■□ 3.16
PRPH-203ENST00000530631 EIF4G3O43432 1585 aaKnown RBP34.79■■■■□ 3.16
PRPH-203ENST00000530631 AQRO60306 1485 aaKnown RBP eCLIP34.75■■■■□ 3.15
PRPH-203ENST00000530631 OSCARQ8IYS5 282 aa34.74■■■■□ 3.15
PRPH-203ENST00000530631 TDRD9Q8NDG6 1382 aaKnown RBP34.65■■■■□ 3.14
PRPH-203ENST00000530631 WDR97A6NE52 1622 aa34.58■■■■□ 3.13
PRPH-203ENST00000530631 WRNQ14191 1432 aaPredicted RBP eCLIP34.56■■■■□ 3.12
PRPH-203ENST00000530631 TOP2BQ02880 1626 aa34.49■■■■□ 3.11
PRPH-203ENST00000530631 BIVM-ERCC5R4GMW8 1640 aa34.47■■■■□ 3.11
PRPH-203ENST00000530631 SYNJ1O43426 1573 aa34.46■■■■□ 3.11
PRPH-203ENST00000530631 ABCA10Q8WWZ4 1543 aa34.45■■■■□ 3.11
PRPH-203ENST00000530631 GRIN2BQ13224 1484 aa34.42■■■■□ 3.1
PRPH-203ENST00000530631 FBLN2P98095 1184 aa34.41■■■■□ 3.1
PRPH-203ENST00000530631 SNAPC4Q5SXM2 1469 aa34.39■■■■□ 3.1
PRPH-203ENST00000530631 GAPVD1Q14C86 1478 aa34.39■■■■□ 3.1
PRPH-203ENST00000530631 CHD1O14646 1710 aa34.37■■■■□ 3.09
PRPH-203ENST00000530631 MAGI1Q96QZ7 1491 aaPredicted RBP34.36■■■■□ 3.09
PRPH-203ENST00000530631 ABCA5Q8WWZ7 1642 aa34.32■■■■□ 3.08
PRPH-203ENST00000530631 CHMP7Q8WUX9 453 aaPredicted RBP34.28■■■■□ 3.08
PRPH-203ENST00000530631 PBRM1Q86U86 1689 aa34.26■■■■□ 3.08
PRPH-203ENST00000530631 SYNJ2O15056 1496 aa34.24■■■■□ 3.07
PRPH-203ENST00000530631 TRIM41Q8WV44 630 aa34.21■■■■□ 3.07
PRPH-203ENST00000530631 RIMBP3CA6NJZ7 1639 aa34.14■■■■□ 3.06
PRPH-203ENST00000530631 RIMBP3BA6NNM3 1639 aa34.14■■■■□ 3.06
PRPH-203ENST00000530631 RIMBP3Q9UFD9 1639 aa34.14■■■■□ 3.06
PRPH-203ENST00000530631 ARHGEF11O15085 1522 aa34.13■■■■□ 3.05
PRPH-203ENST00000530631 ERICH3Q5RHP9 1530 aa34.04■■■■□ 3.04
PRPH-203ENST00000530631 CLASP1Q7Z460 1538 aa34.04■■■■□ 3.04
PRPH-203ENST00000530631 ADAMTS12P58397 1594 aa34.01■■■■□ 3.03
PRPH-203ENST00000530631 FHAD1B1AJZ9 1412 aa33.99■■■■□ 3.03
PRPH-203ENST00000530631 GRIN2AQ12879 1464 aa33.97■■■■□ 3.03
PRPH-203ENST00000530631 KIF27Q86VH2 1401 aa33.87■■■■□ 3.01
PRPH-203ENST00000530631 CYB5RLQ6IPT4 315 aa33.87■■■■□ 3.01
PRPH-203ENST00000530631 NUP160Q12769 1436 aa33.83■■■■□ 3.01
PRPH-203ENST00000530631 ARAP1Q96P48 1450 aa33.82■■■■□ 3.01
PRPH-203ENST00000530631 IGF1RP08069 1367 aa33.79■■■■□ 3
PRPH-203ENST00000530631 CEP170Q5SW79 1584 aa33.79■■■■□ 3
PRPH-203ENST00000530631 CUL7Q14999 1698 aa33.65■■■□□ 2.98
PRPH-203ENST00000530631 SHROOM2Q13796 1616 aa33.59■■■□□ 2.97
PRPH-203ENST00000530631 CARMIL1Q5VZK9 1371 aa33.57■■■□□ 2.96
PRPH-203ENST00000530631 ERCC6L2Q5T890 1561 aa33.54■■■□□ 2.96
PRPH-203ENST00000530631 JPH4Q96JJ6 628 aa33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms