RNA–Protein interactions for RNA: ENST00000530625.5

TTC9C-203, Transcript of tetratricopeptide repeat domain 9C, humanhuman

TSL 5

Gene TTC9C, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-203ENST00000530625 NISCHQ9Y2I1 1504 aa24.56■■□□□ 1.52
TTC9C-203ENST00000530625 ABCC9O60706 1549 aa23.39■■□□□ 1.34
TTC9C-203ENST00000530625 DNAJC5BQ9UF47 199 aa22.78■■□□□ 1.24
TTC9C-203ENST00000530625 CCDC180Q9P1Z9 1646 aa22.55■■□□□ 1.2
TTC9C-203ENST00000530625 RB1CC1Q8TDY2 1594 aa21.93■■□□□ 1.1
TTC9C-203ENST00000530625 DNAJC5Q9H3Z4 198 aa21.77■■□□□ 1.08
TTC9C-203ENST00000530625 PABPN1Q86U42 306 aaKnown RBP eCLIP21.58■■□□□ 1.05
TTC9C-203ENST00000530625 NACADO15069 1562 aa21.55■■□□□ 1.04
TTC9C-203ENST00000530625 UNC13AQ9UPW8 1703 aa21.36■■□□□ 1.01
TTC9C-203ENST00000530625 BICRAQ9NZM4 1560 aa21.27■□□□□ 0.99
TTC9C-203ENST00000530625 CECR2Q9BXF3 1484 aa21.24■□□□□ 0.99
TTC9C-203ENST00000530625 CC2D2AQ9P2K1 1620 aa21.12■□□□□ 0.97
TTC9C-203ENST00000530625 DCAF8L2P0C7V8 631 aa21.05■□□□□ 0.96
TTC9C-203ENST00000530625 SHROOM4Q9ULL8 1493 aa21.05■□□□□ 0.96
TTC9C-203ENST00000530625 MYO15BQ96JP2 1530 aa20.99■□□□□ 0.95
TTC9C-203ENST00000530625 EIF4G1Q04637 1599 aaKnown RBP20.86■□□□□ 0.93
TTC9C-203ENST00000530625 CUX2O14529 1486 aa20.7■□□□□ 0.9
TTC9C-203ENST00000530625 SCRIBQ14160 1630 aa20.37■□□□□ 0.85
TTC9C-203ENST00000530625 ERCC6Q03468 1493 aa20.34■□□□□ 0.85
TTC9C-203ENST00000530625 TRIM41Q8WV44 630 aa20.31■□□□□ 0.84
TTC9C-203ENST00000530625 DCAF1Q9Y4B6 1507 aa20.31■□□□□ 0.84
TTC9C-203ENST00000530625 ZCCHC6Q5VYS8 1495 aaKnown RBP20.16■□□□□ 0.82
TTC9C-203ENST00000530625 NCAPD3P42695 1498 aa19.89■□□□□ 0.77
TTC9C-203ENST00000530625 THOC2Q8NI27 1593 aaKnown RBP19.87■□□□□ 0.77
TTC9C-203ENST00000530625 NESP48681 1621 aa19.8■□□□□ 0.76
TTC9C-203ENST00000530625 HMGXB3Q12766 1538 aa19.67■□□□□ 0.74
TTC9C-203ENST00000530625 ATAD2BQ9ULI0 1458 aa19.65■□□□□ 0.74
TTC9C-203ENST00000530625 SMARCA2P51531 1590 aa19.63■□□□□ 0.73
TTC9C-203ENST00000530625 LAMC3Q9Y6N6 1575 aa19.62■□□□□ 0.73
TTC9C-203ENST00000530625 BAZ1AQ9NRL2 1556 aaPredicted RBP19.56■□□□□ 0.72
TTC9C-203ENST00000530625 KIF21AQ7Z4S6 1674 aa19.55■□□□□ 0.72
TTC9C-203ENST00000530625 PDS5BQ9NTI5 1447 aa19.53■□□□□ 0.72
TTC9C-203ENST00000530625 OSCARQ8IYS5 282 aa19.53■□□□□ 0.72
TTC9C-203ENST00000530625 AEBP2Q6ZN18 517 aaPredicted RBP19.43■□□□□ 0.7
TTC9C-203ENST00000530625 BAZ1BQ9UIG0 1483 aaKnown RBP19.42■□□□□ 0.7
TTC9C-203ENST00000530625 MRC2Q9UBG0 1479 aa19.4■□□□□ 0.7
TTC9C-203ENST00000530625 WDR62O43379 1518 aa19.4■□□□□ 0.7
TTC9C-203ENST00000530625 SMARCA4P51532 1647 aa19.37■□□□□ 0.69
TTC9C-203ENST00000530625 RIMBP3CA6NJZ7 1639 aa19.36■□□□□ 0.69
TTC9C-203ENST00000530625 RIMBP3BA6NNM3 1639 aa19.36■□□□□ 0.69
TTC9C-203ENST00000530625 RIMBP3Q9UFD9 1639 aa19.36■□□□□ 0.69
TTC9C-203ENST00000530625 PEG3Q9GZU2 1588 aa19.26■□□□□ 0.67
TTC9C-203ENST00000530625 ARHGEF11O15085 1522 aa19.22■□□□□ 0.67
TTC9C-203ENST00000530625 CADPSQ9ULU8 1353 aa19.21■□□□□ 0.67
TTC9C-203ENST00000530625 TRHP20396 242 aaPredicted RBP19.2■□□□□ 0.66
TTC9C-203ENST00000530625 CEP164Q9UPV0 1460 aa19.13■□□□□ 0.65
TTC9C-203ENST00000530625 CYB5RLQ6IPT4 315 aa19.09■□□□□ 0.65
TTC9C-203ENST00000530625 FANCD2Q9BXW9 1451 aa18.99■□□□□ 0.63
TTC9C-203ENST00000530625 ARAP1Q96P48 1450 aa18.95■□□□□ 0.62
TTC9C-203ENST00000530625 URB2Q14146 1524 aaKnown RBP18.87■□□□□ 0.61
TTC9C-203ENST00000530625 MROH2BQ7Z745 1585 aa18.87■□□□□ 0.61
TTC9C-203ENST00000530625 RSF1Q96T23 1441 aaPredicted RBP18.84■□□□□ 0.61
TTC9C-203ENST00000530625 CFTRP13569 1480 aa18.8■□□□□ 0.6
TTC9C-203ENST00000530625 IFT140Q96RY7 1462 aa18.79■□□□□ 0.6
TTC9C-203ENST00000530625 ZNF608Q9ULD9 1512 aaPredicted RBP18.78■□□□□ 0.6
TTC9C-203ENST00000530625 ILDR1Q86SU0 546 aaPredicted RBP18.72■□□□□ 0.59
TTC9C-203ENST00000530625 CHD1O14646 1710 aa18.7■□□□□ 0.58
TTC9C-203ENST00000530625 EIF4G3O43432 1585 aaKnown RBP18.68■□□□□ 0.58
TTC9C-203ENST00000530625 WIZO95785 1651 aa18.58■□□□□ 0.57
TTC9C-203ENST00000530625 FBLN2P98095 1184 aa18.55■□□□□ 0.56
TTC9C-203ENST00000530625 PRDM2Q13029 1718 aa18.54■□□□□ 0.56
TTC9C-203ENST00000530625 TOPBP1Q92547 1522 aa18.51■□□□□ 0.55
TTC9C-203ENST00000530625 CLASP1Q7Z460 1538 aa18.49■□□□□ 0.55
TTC9C-203ENST00000530625 ABCC8Q09428 1581 aa18.49■□□□□ 0.55
TTC9C-203ENST00000530625 AQRO60306 1485 aaKnown RBP eCLIP18.48■□□□□ 0.553e-7■■■■■ 30.5
TTC9C-203ENST00000530625 SYNJ1O43426 1573 aa18.42■□□□□ 0.54
TTC9C-203ENST00000530625 TARBP1Q13395 1621 aaKnown RBP18.42■□□□□ 0.54
TTC9C-203ENST00000530625 GAPVD1Q14C86 1478 aa18.38■□□□□ 0.53
TTC9C-203ENST00000530625 DNMBPQ6XZF7 1577 aa18.38■□□□□ 0.53
TTC9C-203ENST00000530625 TOP2AP11388 1531 aaKnown RBP18.34■□□□□ 0.53
TTC9C-203ENST00000530625 CHMP7Q8WUX9 453 aaPredicted RBP18.3■□□□□ 0.52
TTC9C-203ENST00000530625 SNAPC4Q5SXM2 1469 aa18.3■□□□□ 0.52
TTC9C-203ENST00000530625 WDR97A6NE52 1622 aa18.28■□□□□ 0.52
TTC9C-203ENST00000530625 MAGI1Q96QZ7 1491 aaPredicted RBP18.27■□□□□ 0.52
TTC9C-203ENST00000530625 POLA1P09884 1462 aaPredicted RBP18.26■□□□□ 0.51
TTC9C-203ENST00000530625 KDM4FA0A1W2PPD8 638 aa18.25■□□□□ 0.51
TTC9C-203ENST00000530625 KIF13AQ9H1H9 1805 aa18.22■□□□□ 0.51
TTC9C-203ENST00000530625 SYNJ2O15056 1496 aa18.21■□□□□ 0.51
TTC9C-203ENST00000530625 TDRD9Q8NDG6 1382 aaKnown RBP18.21■□□□□ 0.51
TTC9C-203ENST00000530625 SOGA1O94964 1423 aa18.15■□□□□ 0.5
TTC9C-203ENST00000530625 GRIN2BQ13224 1484 aa18.14■□□□□ 0.5
TTC9C-203ENST00000530625 RAD54L2Q9Y4B4 1467 aa18.14■□□□□ 0.5
TTC9C-203ENST00000530625 ERCC6L2Q5T890 1561 aa18.11■□□□□ 0.49
TTC9C-203ENST00000530625 CCDC88BA6NC98 1476 aa18.09■□□□□ 0.49
TTC9C-203ENST00000530625 KDM6BO15054 1643 aa18.05■□□□□ 0.48
TTC9C-203ENST00000530625 ABCC10Q5T3U5 1492 aa18.02■□□□□ 0.48
TTC9C-203ENST00000530625 FAM69CQ0P6D2 419 aa18■□□□□ 0.47
TTC9C-203ENST00000530625 FBXO41Q8TF61 875 aa18■□□□□ 0.47
TTC9C-203ENST00000530625 HECW2Q9P2P5 1572 aa18■□□□□ 0.47
TTC9C-203ENST00000530625 CEP170Q5SW79 1584 aa17.99■□□□□ 0.47
TTC9C-203ENST00000530625 FGD5Q6ZNL6 1462 aa17.98■□□□□ 0.47
TTC9C-203ENST00000530625 PBRM1Q86U86 1689 aa17.97■□□□□ 0.47
TTC9C-203ENST00000530625 DIP2BQ9P265 1576 aa17.94■□□□□ 0.46
TTC9C-203ENST00000530625 MAPKBP1O60336 1514 aa17.93■□□□□ 0.46
TTC9C-203ENST00000530625 SHROOM2Q13796 1616 aa17.92■□□□□ 0.46
TTC9C-203ENST00000530625 ADGRL1O94910 1474 aa17.91■□□□□ 0.46
TTC9C-203ENST00000530625 GRIN2AQ12879 1464 aa17.9■□□□□ 0.46
TTC9C-203ENST00000530625 NUP160Q12769 1436 aa17.89■□□□□ 0.45
TTC9C-203ENST00000530625 NPM1P06748 294 aaKnown RBP eCLIP17.86■□□□□ 0.45
TTC9C-203ENST00000530625 LMTK3Q96Q04 1460 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms