RNA–Protein interactions for RNA: ENST00000530568.5

FGFR1-234, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 3

Gene FGFR1, Length 467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-234ENST00000530568 NISCHQ9Y2I1 1504 aa24.69■■□□□ 1.54
FGFR1-234ENST00000530568 CCDC180Q9P1Z9 1646 aa22.24■■□□□ 1.15
FGFR1-234ENST00000530568 ABCC9O60706 1549 aa21.77■■□□□ 1.08
FGFR1-234ENST00000530568 RB1CC1Q8TDY2 1594 aa21■□□□□ 0.95
FGFR1-234ENST00000530568 NACADO15069 1562 aa20.9■□□□□ 0.94
FGFR1-234ENST00000530568 MYO15BQ96JP2 1530 aa20.72■□□□□ 0.91
FGFR1-234ENST00000530568 DCAF8L2P0C7V8 631 aa20.59■□□□□ 0.89
FGFR1-234ENST00000530568 ZCCHC6Q5VYS8 1495 aaKnown RBP20.55■□□□□ 0.88
FGFR1-234ENST00000530568 UNC13AQ9UPW8 1703 aa20.52■□□□□ 0.88
FGFR1-234ENST00000530568 DCAF1Q9Y4B6 1507 aa20.51■□□□□ 0.87
FGFR1-234ENST00000530568 BICRAQ9NZM4 1560 aa20.24■□□□□ 0.83
FGFR1-234ENST00000530568 SHROOM4Q9ULL8 1493 aa20.22■□□□□ 0.83
FGFR1-234ENST00000530568 PABPN1Q86U42 306 aaKnown RBP eCLIP20.19■□□□□ 0.82
FGFR1-234ENST00000530568 SCRIBQ14160 1630 aa20.13■□□□□ 0.81
FGFR1-234ENST00000530568 DNAJC5BQ9UF47 199 aa20.01■□□□□ 0.79
FGFR1-234ENST00000530568 EIF4G1Q04637 1599 aaKnown RBP19.78■□□□□ 0.76
FGFR1-234ENST00000530568 CC2D2AQ9P2K1 1620 aa19.76■□□□□ 0.75
FGFR1-234ENST00000530568 CECR2Q9BXF3 1484 aa19.64■□□□□ 0.73
FGFR1-234ENST00000530568 SMARCA4P51532 1647 aa19.27■□□□□ 0.68
FGFR1-234ENST00000530568 SMARCA2P51531 1590 aa19.24■□□□□ 0.67
FGFR1-234ENST00000530568 BAZ1AQ9NRL2 1556 aaPredicted RBP19.23■□□□□ 0.67
FGFR1-234ENST00000530568 NCAPD3P42695 1498 aa19.2■□□□□ 0.66
FGFR1-234ENST00000530568 HMGXB3Q12766 1538 aa19.18■□□□□ 0.66
FGFR1-234ENST00000530568 ATAD2BQ9ULI0 1458 aa19.15■□□□□ 0.66
FGFR1-234ENST00000530568 PEG3Q9GZU2 1588 aa19.1■□□□□ 0.65
FGFR1-234ENST00000530568 BAZ1BQ9UIG0 1483 aaKnown RBP19.05■□□□□ 0.64
FGFR1-234ENST00000530568 MROH2BQ7Z745 1585 aa18.96■□□□□ 0.63
FGFR1-234ENST00000530568 ERCC6Q03468 1493 aa18.9■□□□□ 0.62
FGFR1-234ENST00000530568 LAMC3Q9Y6N6 1575 aa18.83■□□□□ 0.6
FGFR1-234ENST00000530568 CUX2O14529 1486 aa18.82■□□□□ 0.6
FGFR1-234ENST00000530568 WIZO95785 1651 aa18.79■□□□□ 0.6
FGFR1-234ENST00000530568 NESP48681 1621 aa18.72■□□□□ 0.59
FGFR1-234ENST00000530568 PDS5BQ9NTI5 1447 aa18.67■□□□□ 0.58
FGFR1-234ENST00000530568 KIF21AQ7Z4S6 1674 aa18.66■□□□□ 0.58
FGFR1-234ENST00000530568 RSF1Q96T23 1441 aaPredicted RBP18.65■□□□□ 0.58
FGFR1-234ENST00000530568 TOP2AP11388 1531 aaKnown RBP18.64■□□□□ 0.58
FGFR1-234ENST00000530568 THOC2Q8NI27 1593 aaKnown RBP18.64■□□□□ 0.57
FGFR1-234ENST00000530568 CADPSQ9ULU8 1353 aa18.61■□□□□ 0.57
FGFR1-234ENST00000530568 PRDM2Q13029 1718 aa18.54■□□□□ 0.56
FGFR1-234ENST00000530568 MRC2Q9UBG0 1479 aa18.48■□□□□ 0.55
FGFR1-234ENST00000530568 CEP164Q9UPV0 1460 aa18.47■□□□□ 0.55
FGFR1-234ENST00000530568 CFTRP13569 1480 aa18.46■□□□□ 0.55
FGFR1-234ENST00000530568 WDR62O43379 1518 aa18.45■□□□□ 0.54
FGFR1-234ENST00000530568 FANCD2Q9BXW9 1451 aa18.42■□□□□ 0.54
FGFR1-234ENST00000530568 DNAJC5Q9H3Z4 198 aa18.36■□□□□ 0.53
FGFR1-234ENST00000530568 CCDC88BA6NC98 1476 aa18.32■□□□□ 0.52
FGFR1-234ENST00000530568 URB2Q14146 1524 aaKnown RBP18.21■□□□□ 0.51
FGFR1-234ENST00000530568 ABCC8Q09428 1581 aa18.19■□□□□ 0.5
FGFR1-234ENST00000530568 DNMBPQ6XZF7 1577 aa18.13■□□□□ 0.49
FGFR1-234ENST00000530568 TOPBP1Q92547 1522 aa18.09■□□□□ 0.49
FGFR1-234ENST00000530568 IFT140Q96RY7 1462 aa18.09■□□□□ 0.49
FGFR1-234ENST00000530568 EIF4G3O43432 1585 aaKnown RBP17.97■□□□□ 0.47
FGFR1-234ENST00000530568 WDR97A6NE52 1622 aa17.94■□□□□ 0.46
FGFR1-234ENST00000530568 TARBP1Q13395 1621 aaKnown RBP17.94■□□□□ 0.46
FGFR1-234ENST00000530568 SUPT5HO00267 1087 aaKnown RBP17.92■□□□□ 0.46
FGFR1-234ENST00000530568 POLA1P09884 1462 aaPredicted RBP17.92■□□□□ 0.46
FGFR1-234ENST00000530568 ZNF608Q9ULD9 1512 aaPredicted RBP17.91■□□□□ 0.46
FGFR1-234ENST00000530568 OSCARQ8IYS5 282 aa17.87■□□□□ 0.45
FGFR1-234ENST00000530568 FGD5Q6ZNL6 1462 aa17.84■□□□□ 0.45
FGFR1-234ENST00000530568 CUX1P39880 1505 aa17.83■□□□□ 0.45
FGFR1-234ENST00000530568 SOGA1O94964 1423 aa17.81■□□□□ 0.44
FGFR1-234ENST00000530568 CHD1O14646 1710 aa17.81■□□□□ 0.44
FGFR1-234ENST00000530568 AQRO60306 1485 aaKnown RBP eCLIP17.76■□□□□ 0.43
FGFR1-234ENST00000530568 RAD54L2Q9Y4B4 1467 aa17.76■□□□□ 0.43
FGFR1-234ENST00000530568 PBRM1Q86U86 1689 aa17.74■□□□□ 0.43
FGFR1-234ENST00000530568 MAGI1Q96QZ7 1491 aaPredicted RBP17.73■□□□□ 0.43
FGFR1-234ENST00000530568 BIVM-ERCC5R4GMW8 1640 aa17.72■□□□□ 0.43
FGFR1-234ENST00000530568 GRIN2BQ13224 1484 aa17.7■□□□□ 0.42
FGFR1-234ENST00000530568 TOP2BQ02880 1626 aa17.7■□□□□ 0.42
FGFR1-234ENST00000530568 ABCA10Q8WWZ4 1543 aa17.69■□□□□ 0.42
FGFR1-234ENST00000530568 TDRD9Q8NDG6 1382 aaKnown RBP17.68■□□□□ 0.42
FGFR1-234ENST00000530568 RIMBP3CA6NJZ7 1639 aa17.68■□□□□ 0.42
FGFR1-234ENST00000530568 RIMBP3BA6NNM3 1639 aa17.68■□□□□ 0.42
FGFR1-234ENST00000530568 RIMBP3Q9UFD9 1639 aa17.68■□□□□ 0.42
FGFR1-234ENST00000530568 SNAPC4Q5SXM2 1469 aa17.68■□□□□ 0.42
FGFR1-234ENST00000530568 ABCA5Q8WWZ7 1642 aa17.67■□□□□ 0.42
FGFR1-234ENST00000530568 WRNQ14191 1432 aaPredicted RBP eCLIP17.66■□□□□ 0.42
FGFR1-234ENST00000530568 SYNJ1O43426 1573 aa17.66■□□□□ 0.42
FGFR1-234ENST00000530568 GAPVD1Q14C86 1478 aa17.65■□□□□ 0.42
FGFR1-234ENST00000530568 ARHGEF11O15085 1522 aa17.64■□□□□ 0.41
FGFR1-234ENST00000530568 TRIM41Q8WV44 630 aa17.63■□□□□ 0.41
FGFR1-234ENST00000530568 SYNJ2O15056 1496 aa17.63■□□□□ 0.41
FGFR1-234ENST00000530568 FBLN2P98095 1184 aa17.62■□□□□ 0.41
FGFR1-234ENST00000530568 CHMP7Q8WUX9 453 aaPredicted RBP17.57■□□□□ 0.4
FGFR1-234ENST00000530568 CLASP1Q7Z460 1538 aa17.56■□□□□ 0.4
FGFR1-234ENST00000530568 ADAMTS12P58397 1594 aa17.53■□□□□ 0.4
FGFR1-234ENST00000530568 ERICH3Q5RHP9 1530 aa17.52■□□□□ 0.39
FGFR1-234ENST00000530568 GRIN2AQ12879 1464 aa17.46■□□□□ 0.39
FGFR1-234ENST00000530568 FHAD1B1AJZ9 1412 aa17.45■□□□□ 0.38
FGFR1-234ENST00000530568 ARAP1Q96P48 1450 aa17.44■□□□□ 0.38
FGFR1-234ENST00000530568 CUL7Q14999 1698 aa17.38■□□□□ 0.37
FGFR1-234ENST00000530568 NUP160Q12769 1436 aa17.38■□□□□ 0.37
FGFR1-234ENST00000530568 CYB5RLQ6IPT4 315 aa17.37■□□□□ 0.37
FGFR1-234ENST00000530568 CEP170Q5SW79 1584 aa17.36■□□□□ 0.37
FGFR1-234ENST00000530568 KIF27Q86VH2 1401 aa17.34■□□□□ 0.37
FGFR1-234ENST00000530568 SHROOM2Q13796 1616 aa17.33■□□□□ 0.37
FGFR1-234ENST00000530568 RUSC2Q8N2Y8 1516 aa17.27■□□□□ 0.36
FGFR1-234ENST00000530568 ERCC6L2Q5T890 1561 aa17.18■□□□□ 0.34
FGFR1-234ENST00000530568 IGF1RP08069 1367 aa17.17■□□□□ 0.34
FGFR1-234ENST00000530568 KIAA0586Q9BVV6 1533 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms