RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 NISCHQ9Y2I1 1504 aa27.48■■□□□ 1.99
TM9SF1-210ENST00000530563 ABCC9O60706 1549 aa25.17■■□□□ 1.62
TM9SF1-210ENST00000530563 CCDC180Q9P1Z9 1646 aa24.75■■□□□ 1.55
TM9SF1-210ENST00000530563 DNAJC5BQ9UF47 199 aa24.08■■□□□ 1.45
TM9SF1-210ENST00000530563 RB1CC1Q8TDY2 1594 aa23.75■■□□□ 1.39
TM9SF1-210ENST00000530563 NACADO15069 1562 aa23.52■■□□□ 1.36
TM9SF1-210ENST00000530563 PABPN1Q86U42 306 aaKnown RBP eCLIP23.4■■□□□ 1.34
TM9SF1-210ENST00000530563 DCAF8L2P0C7V8 631 aa23.28■■□□□ 1.32
TM9SF1-210ENST00000530563 UNC13AQ9UPW8 1703 aa23.22■■□□□ 1.31
TM9SF1-210ENST00000530563 BICRAQ9NZM4 1560 aa23.17■■□□□ 1.3
TM9SF1-210ENST00000530563 MYO15BQ96JP2 1530 aa23.12■■□□□ 1.29
TM9SF1-210ENST00000530563 SHROOM4Q9ULL8 1493 aa22.75■■□□□ 1.23
TM9SF1-210ENST00000530563 CECR2Q9BXF3 1484 aa22.71■■□□□ 1.23
TM9SF1-210ENST00000530563 CC2D2AQ9P2K1 1620 aa22.71■■□□□ 1.23
TM9SF1-210ENST00000530563 ZCCHC6Q5VYS8 1495 aaKnown RBP22.69■■□□□ 1.22
TM9SF1-210ENST00000530563 DCAF1Q9Y4B6 1507 aa22.68■■□□□ 1.22
TM9SF1-210ENST00000530563 EIF4G1Q04637 1599 aaKnown RBP22.58■■□□□ 1.2
TM9SF1-210ENST00000530563 SCRIBQ14160 1630 aa22.53■■□□□ 1.2
TM9SF1-210ENST00000530563 DNAJC5Q9H3Z4 198 aa22.33■■□□□ 1.17
TM9SF1-210ENST00000530563 CUX2O14529 1486 aa21.83■■□□□ 1.09
TM9SF1-210ENST00000530563 NCAPD3P42695 1498 aa21.78■■□□□ 1.08
TM9SF1-210ENST00000530563 ERCC6Q03468 1493 aa21.69■■□□□ 1.06
TM9SF1-210ENST00000530563 ATAD2BQ9ULI0 1458 aa21.64■■□□□ 1.06
TM9SF1-210ENST00000530563 NESP48681 1621 aa21.55■■□□□ 1.04
TM9SF1-210ENST00000530563 HMGXB3Q12766 1538 aa21.53■■□□□ 1.04
TM9SF1-210ENST00000530563 SMARCA2P51531 1590 aa21.49■■□□□ 1.03
TM9SF1-210ENST00000530563 SMARCA4P51532 1647 aa21.48■■□□□ 1.03
TM9SF1-210ENST00000530563 THOC2Q8NI27 1593 aaKnown RBP21.37■■□□□ 1.01
TM9SF1-210ENST00000530563 BAZ1BQ9UIG0 1483 aaKnown RBP21.35■■□□□ 1.01
TM9SF1-210ENST00000530563 PEG3Q9GZU2 1588 aa21.32■■□□□ 1
TM9SF1-210ENST00000530563 BAZ1AQ9NRL2 1556 aaPredicted RBP21.31■■□□□ 1
TM9SF1-210ENST00000530563 LAMC3Q9Y6N6 1575 aa21.27■■□□□ 1
TM9SF1-210ENST00000530563 MROH2BQ7Z745 1585 aa21.19■□□□□ 0.98
TM9SF1-210ENST00000530563 KIF21AQ7Z4S6 1674 aa21.18■□□□□ 0.98
TM9SF1-210ENST00000530563 PDS5BQ9NTI5 1447 aa21.17■□□□□ 0.98
TM9SF1-210ENST00000530563 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
TM9SF1-210ENST00000530563 CADPSQ9ULU8 1353 aa21.08■□□□□ 0.96
TM9SF1-210ENST00000530563 MRC2Q9UBG0 1479 aa21.01■□□□□ 0.95
TM9SF1-210ENST00000530563 WDR62O43379 1518 aa20.99■□□□□ 0.95
TM9SF1-210ENST00000530563 WIZO95785 1651 aa20.86■□□□□ 0.93
TM9SF1-210ENST00000530563 CEP164Q9UPV0 1460 aa20.83■□□□□ 0.93
TM9SF1-210ENST00000530563 FANCD2Q9BXW9 1451 aa20.81■□□□□ 0.92
TM9SF1-210ENST00000530563 OSCARQ8IYS5 282 aa20.79■□□□□ 0.92
TM9SF1-210ENST00000530563 CFTRP13569 1480 aa20.77■□□□□ 0.92
TM9SF1-210ENST00000530563 URB2Q14146 1524 aaKnown RBP20.7■□□□□ 0.9
TM9SF1-210ENST00000530563 RSF1Q96T23 1441 aaPredicted RBP20.62■□□□□ 0.89
TM9SF1-210ENST00000530563 TOP2AP11388 1531 aaKnown RBP20.57■□□□□ 0.88
TM9SF1-210ENST00000530563 RIMBP3CA6NJZ7 1639 aa20.54■□□□□ 0.88
TM9SF1-210ENST00000530563 RIMBP3BA6NNM3 1639 aa20.54■□□□□ 0.88
TM9SF1-210ENST00000530563 RIMBP3Q9UFD9 1639 aa20.54■□□□□ 0.88
TM9SF1-210ENST00000530563 ZNF608Q9ULD9 1512 aaPredicted RBP20.51■□□□□ 0.87
TM9SF1-210ENST00000530563 IFT140Q96RY7 1462 aa20.46■□□□□ 0.87
TM9SF1-210ENST00000530563 ARHGEF11O15085 1522 aa20.45■□□□□ 0.86
TM9SF1-210ENST00000530563 PRDM2Q13029 1718 aa20.4■□□□□ 0.86
TM9SF1-210ENST00000530563 CCDC88BA6NC98 1476 aa20.39■□□□□ 0.85
TM9SF1-210ENST00000530563 TOPBP1Q92547 1522 aa20.38■□□□□ 0.85
TM9SF1-210ENST00000530563 CYB5RLQ6IPT4 315 aa20.33■□□□□ 0.85
TM9SF1-210ENST00000530563 EIF4G3O43432 1585 aaKnown RBP20.31■□□□□ 0.84
TM9SF1-210ENST00000530563 ABCC8Q09428 1581 aa20.28■□□□□ 0.84
TM9SF1-210ENST00000530563 AQRO60306 1485 aaKnown RBP eCLIP20.27■□□□□ 0.84
TM9SF1-210ENST00000530563 TARBP1Q13395 1621 aaKnown RBP20.25■□□□□ 0.83
TM9SF1-210ENST00000530563 DNMBPQ6XZF7 1577 aa20.25■□□□□ 0.83
TM9SF1-210ENST00000530563 ARAP1Q96P48 1450 aa20.24■□□□□ 0.83
TM9SF1-210ENST00000530563 CHD1O14646 1710 aa20.21■□□□□ 0.83
TM9SF1-210ENST00000530563 TRHP20396 242 aaPredicted RBP20.16■□□□□ 0.82
TM9SF1-210ENST00000530563 POLA1P09884 1462 aaPredicted RBP20.16■□□□□ 0.82
TM9SF1-210ENST00000530563 FBLN2P98095 1184 aa20.13■□□□□ 0.81
TM9SF1-210ENST00000530563 RAD54L2Q9Y4B4 1467 aa20.11■□□□□ 0.81
TM9SF1-210ENST00000530563 TDRD9Q8NDG6 1382 aaKnown RBP20.08■□□□□ 0.81
TM9SF1-210ENST00000530563 SOGA1O94964 1423 aa20.05■□□□□ 0.8
TM9SF1-210ENST00000530563 CLASP1Q7Z460 1538 aa20.04■□□□□ 0.8
TM9SF1-210ENST00000530563 SNAPC4Q5SXM2 1469 aa20■□□□□ 0.79
TM9SF1-210ENST00000530563 FGD5Q6ZNL6 1462 aa19.96■□□□□ 0.79
TM9SF1-210ENST00000530563 WDR97A6NE52 1622 aa19.95■□□□□ 0.78
TM9SF1-210ENST00000530563 CHMP7Q8WUX9 453 aaPredicted RBP19.95■□□□□ 0.78
TM9SF1-210ENST00000530563 MAGI1Q96QZ7 1491 aaPredicted RBP19.93■□□□□ 0.78
TM9SF1-210ENST00000530563 CUX1P39880 1505 aa19.92■□□□□ 0.78
TM9SF1-210ENST00000530563 SYNJ1O43426 1573 aa19.91■□□□□ 0.78
TM9SF1-210ENST00000530563 GRIN2BQ13224 1484 aa19.91■□□□□ 0.78
TM9SF1-210ENST00000530563 SYNJ2O15056 1496 aa19.89■□□□□ 0.77
TM9SF1-210ENST00000530563 GAPVD1Q14C86 1478 aa19.83■□□□□ 0.76
TM9SF1-210ENST00000530563 AEBP2Q6ZN18 517 aaPredicted RBP19.81■□□□□ 0.76
TM9SF1-210ENST00000530563 PBRM1Q86U86 1689 aa19.74■□□□□ 0.75
TM9SF1-210ENST00000530563 ABCA10Q8WWZ4 1543 aa19.73■□□□□ 0.75
TM9SF1-210ENST00000530563 ERCC6L2Q5T890 1561 aa19.72■□□□□ 0.75
TM9SF1-210ENST00000530563 ABCA5Q8WWZ7 1642 aa19.72■□□□□ 0.75
TM9SF1-210ENST00000530563 GRIN2AQ12879 1464 aa19.66■□□□□ 0.74
TM9SF1-210ENST00000530563 NUP160Q12769 1436 aa19.64■□□□□ 0.73
TM9SF1-210ENST00000530563 CEP170Q5SW79 1584 aa19.61■□□□□ 0.73
TM9SF1-210ENST00000530563 ADAMTS12P58397 1594 aa19.57■□□□□ 0.72
TM9SF1-210ENST00000530563 SHROOM2Q13796 1616 aa19.57■□□□□ 0.72
TM9SF1-210ENST00000530563 WRNQ14191 1432 aaPredicted RBP eCLIP19.55■□□□□ 0.72
TM9SF1-210ENST00000530563 FHAD1B1AJZ9 1412 aa19.53■□□□□ 0.72
TM9SF1-210ENST00000530563 KIF13AQ9H1H9 1805 aa19.49■□□□□ 0.71
TM9SF1-210ENST00000530563 TOP2BQ02880 1626 aa19.46■□□□□ 0.71
TM9SF1-210ENST00000530563 ERICH3Q5RHP9 1530 aa19.46■□□□□ 0.71
TM9SF1-210ENST00000530563 PRG4Q92954 1404 aaPredicted RBP19.45■□□□□ 0.7
TM9SF1-210ENST00000530563 BIVM-ERCC5R4GMW8 1640 aa19.45■□□□□ 0.7
TM9SF1-210ENST00000530563 JPH4Q96JJ6 628 aa19.43■□□□□ 0.7
TM9SF1-210ENST00000530563 ABCC10Q5T3U5 1492 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms