RNA–Protein interactions for RNA: ENST00000530498.1

STX3-205, Transcript of syntaxin 3, humanhuman

TSL 2

Gene STX3, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX3-205ENST00000530498 NISCHQ9Y2I1 1504 aa39.83■■■■□ 3.97
STX3-205ENST00000530498 CCDC180Q9P1Z9 1646 aa35.57■■■■□ 3.29
STX3-205ENST00000530498 ABCC9O60706 1549 aa34.87■■■■□ 3.17
STX3-205ENST00000530498 RB1CC1Q8TDY2 1594 aa33.55■■■□□ 2.96
STX3-205ENST00000530498 NACADO15069 1562 aa33.47■■■□□ 2.95
STX3-205ENST00000530498 DCAF8L2P0C7V8 631 aa33.28■■■□□ 2.92
STX3-205ENST00000530498 MYO15BQ96JP2 1530 aa33.22■■■□□ 2.91
STX3-205ENST00000530498 ZCCHC6Q5VYS8 1495 aaKnown RBP33.14■■■□□ 2.9
STX3-205ENST00000530498 DCAF1Q9Y4B6 1507 aa32.99■■■□□ 2.87
STX3-205ENST00000530498 UNC13AQ9UPW8 1703 aa32.79■■■□□ 2.84
STX3-205ENST00000530498 PABPN1Q86U42 306 aaKnown RBP eCLIP32.51■■■□□ 2.79
STX3-205ENST00000530498 BICRAQ9NZM4 1560 aa32.49■■■□□ 2.79
STX3-205ENST00000530498 SCRIBQ14160 1630 aa32.36■■■□□ 2.77
STX3-205ENST00000530498 SHROOM4Q9ULL8 1493 aa32.22■■■□□ 2.75
STX3-205ENST00000530498 DNAJC5BQ9UF47 199 aa32.12■■■□□ 2.73
STX3-205ENST00000530498 EIF4G1Q04637 1599 aaKnown RBP31.66■■■□□ 2.66
STX3-205ENST00000530498 CC2D2AQ9P2K1 1620 aa31.58■■■□□ 2.65
STX3-205ENST00000530498 CECR2Q9BXF3 1484 aa31.38■■■□□ 2.61
STX3-205ENST00000530498 SMARCA4P51532 1647 aa30.96■■■□□ 2.55
STX3-205ENST00000530498 BAZ1AQ9NRL2 1556 aaPredicted RBP30.92■■■□□ 2.54
STX3-205ENST00000530498 NCAPD3P42695 1498 aa30.84■■■□□ 2.53
STX3-205ENST00000530498 SMARCA2P51531 1590 aa30.82■■■□□ 2.52
STX3-205ENST00000530498 ATAD2BQ9ULI0 1458 aa30.82■■■□□ 2.52
STX3-205ENST00000530498 HMGXB3Q12766 1538 aa30.7■■■□□ 2.51
STX3-205ENST00000530498 PEG3Q9GZU2 1588 aa30.69■■■□□ 2.5
STX3-205ENST00000530498 MROH2BQ7Z745 1585 aa30.66■■■□□ 2.5
STX3-205ENST00000530498 BAZ1BQ9UIG0 1483 aaKnown RBP30.57■■■□□ 2.48
STX3-205ENST00000530498 WIZO95785 1651 aa30.35■■■□□ 2.45
STX3-205ENST00000530498 RSF1Q96T23 1441 aaPredicted RBP30.23■■■□□ 2.43
STX3-205ENST00000530498 ERCC6Q03468 1493 aa30.11■■■□□ 2.41
STX3-205ENST00000530498 NESP48681 1621 aa30.11■■■□□ 2.41
STX3-205ENST00000530498 LAMC3Q9Y6N6 1575 aa30.1■■■□□ 2.41
STX3-205ENST00000530498 TOP2AP11388 1531 aaKnown RBP30.04■■■□□ 2.4
STX3-205ENST00000530498 CADPSQ9ULU8 1353 aa29.92■■■□□ 2.38
STX3-205ENST00000530498 CUX2O14529 1486 aa29.89■■■□□ 2.38
STX3-205ENST00000530498 PDS5BQ9NTI5 1447 aa29.88■■■□□ 2.37
STX3-205ENST00000530498 KIF21AQ7Z4S6 1674 aa29.82■■■□□ 2.36
STX3-205ENST00000530498 THOC2Q8NI27 1593 aaKnown RBP29.76■■■□□ 2.35
STX3-205ENST00000530498 CFTRP13569 1480 aa29.71■■■□□ 2.35
STX3-205ENST00000530498 CCDC88BA6NC98 1476 aa29.64■■■□□ 2.34
STX3-205ENST00000530498 FANCD2Q9BXW9 1451 aa29.58■■■□□ 2.33
STX3-205ENST00000530498 CEP164Q9UPV0 1460 aa29.58■■■□□ 2.33
STX3-205ENST00000530498 PRDM2Q13029 1718 aa29.57■■■□□ 2.32
STX3-205ENST00000530498 MRC2Q9UBG0 1479 aa29.57■■■□□ 2.32
STX3-205ENST00000530498 WDR62O43379 1518 aa29.5■■■□□ 2.31
STX3-205ENST00000530498 SUPT5HO00267 1087 aaKnown RBP29.29■■■□□ 2.28
STX3-205ENST00000530498 URB2Q14146 1524 aaKnown RBP29.28■■■□□ 2.28
STX3-205ENST00000530498 DNAJC5Q9H3Z4 198 aa29.14■■■□□ 2.26
STX3-205ENST00000530498 ABCC8Q09428 1581 aa29.13■■■□□ 2.25
STX3-205ENST00000530498 TOPBP1Q92547 1522 aa29.09■■■□□ 2.25
STX3-205ENST00000530498 DNMBPQ6XZF7 1577 aa29.06■■■□□ 2.24
STX3-205ENST00000530498 IFT140Q96RY7 1462 aa28.97■■■□□ 2.23
STX3-205ENST00000530498 POLA1P09884 1462 aaPredicted RBP28.82■■■□□ 2.2
STX3-205ENST00000530498 TARBP1Q13395 1621 aaKnown RBP28.8■■■□□ 2.2
STX3-205ENST00000530498 ZNF608Q9ULD9 1512 aaPredicted RBP28.8■■■□□ 2.2
STX3-205ENST00000530498 CUX1P39880 1505 aa28.78■■■□□ 2.2
STX3-205ENST00000530498 EIF4G3O43432 1585 aaKnown RBP28.74■■■□□ 2.19
STX3-205ENST00000530498 FGD5Q6ZNL6 1462 aa28.72■■■□□ 2.19
STX3-205ENST00000530498 SOGA1O94964 1423 aa28.7■■■□□ 2.19
STX3-205ENST00000530498 RAD54L2Q9Y4B4 1467 aa28.66■■■□□ 2.18
STX3-205ENST00000530498 WDR97A6NE52 1622 aa28.64■■■□□ 2.18
STX3-205ENST00000530498 AQRO60306 1485 aaKnown RBP eCLIP28.61■■■□□ 2.17
STX3-205ENST00000530498 OSCARQ8IYS5 282 aa28.58■■■□□ 2.17
STX3-205ENST00000530498 BIVM-ERCC5R4GMW8 1640 aa28.54■■■□□ 2.16
STX3-205ENST00000530498 WRNQ14191 1432 aaPredicted RBP eCLIP28.54■■■□□ 2.16
STX3-205ENST00000530498 TDRD9Q8NDG6 1382 aaKnown RBP28.53■■■□□ 2.16
STX3-205ENST00000530498 TOP2BQ02880 1626 aa28.53■■■□□ 2.16
STX3-205ENST00000530498 SYNJ1O43426 1573 aa28.48■■■□□ 2.15
STX3-205ENST00000530498 ABCA10Q8WWZ4 1543 aa28.46■■■□□ 2.15
STX3-205ENST00000530498 CHD1O14646 1710 aa28.43■■■□□ 2.14
STX3-205ENST00000530498 GRIN2BQ13224 1484 aa28.4■■■□□ 2.14
STX3-205ENST00000530498 ABCA5Q8WWZ7 1642 aa28.38■■■□□ 2.13
STX3-205ENST00000530498 GAPVD1Q14C86 1478 aa28.38■■■□□ 2.13
STX3-205ENST00000530498 PBRM1Q86U86 1689 aa28.38■■■□□ 2.13
STX3-205ENST00000530498 SNAPC4Q5SXM2 1469 aa28.37■■■□□ 2.13
STX3-205ENST00000530498 MAGI1Q96QZ7 1491 aaPredicted RBP28.37■■■□□ 2.13
STX3-205ENST00000530498 FBLN2P98095 1184 aa28.31■■■□□ 2.12
STX3-205ENST00000530498 SYNJ2O15056 1496 aa28.25■■■□□ 2.11
STX3-205ENST00000530498 CHMP7Q8WUX9 453 aaPredicted RBP28.23■■■□□ 2.11
STX3-205ENST00000530498 RIMBP3CA6NJZ7 1639 aa28.16■■■□□ 2.1
STX3-205ENST00000530498 RIMBP3BA6NNM3 1639 aa28.16■■■□□ 2.1
STX3-205ENST00000530498 RIMBP3Q9UFD9 1639 aa28.16■■■□□ 2.1
STX3-205ENST00000530498 ERICH3Q5RHP9 1530 aa28.13■■■□□ 2.09
STX3-205ENST00000530498 ARHGEF11O15085 1522 aa28.13■■■□□ 2.09
STX3-205ENST00000530498 ADAMTS12P58397 1594 aa28.11■■■□□ 2.09
STX3-205ENST00000530498 CLASP1Q7Z460 1538 aa28.1■■■□□ 2.09
STX3-205ENST00000530498 TRIM41Q8WV44 630 aa28.07■■■□□ 2.08
STX3-205ENST00000530498 FHAD1B1AJZ9 1412 aa28.05■■■□□ 2.08
STX3-205ENST00000530498 GRIN2AQ12879 1464 aa28.03■■■□□ 2.08
STX3-205ENST00000530498 KIF27Q86VH2 1401 aa27.98■■■□□ 2.07
STX3-205ENST00000530498 NUP160Q12769 1436 aa27.92■■■□□ 2.06
STX3-205ENST00000530498 CEP170Q5SW79 1584 aa27.9■■■□□ 2.06
STX3-205ENST00000530498 ARAP1Q96P48 1450 aa27.87■■■□□ 2.05
STX3-205ENST00000530498 CUL7Q14999 1698 aa27.87■■■□□ 2.05
STX3-205ENST00000530498 IGF1RP08069 1367 aa27.85■■■□□ 2.05
STX3-205ENST00000530498 CYB5RLQ6IPT4 315 aa27.83■■■□□ 2.05
STX3-205ENST00000530498 SHROOM2Q13796 1616 aa27.77■■■□□ 2.04
STX3-205ENST00000530498 RUSC2Q8N2Y8 1516 aa27.71■■■□□ 2.03
STX3-205ENST00000530498 CARMIL1Q5VZK9 1371 aa27.69■■■□□ 2.02
STX3-205ENST00000530498 ERCC6L2Q5T890 1561 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms