RNA–Protein interactions for RNA: ENST00000530375.5

AP3M2-217, Transcript of adaptor related protein complex 3 subunit mu 2, humanhuman

TSL 1 (best)

Gene AP3M2, Length 1,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3M2-217ENST00000530375 NISCHQ9Y2I1 1504 aa30.57■■■□□ 2.49
AP3M2-217ENST00000530375 AEBP2Q6ZN18 517 aaPredicted RBP29.19■■■□□ 2.26
AP3M2-217ENST00000530375 CHIC1Q5VXU3 224 aa28.44■■■□□ 2.14
AP3M2-217ENST00000530375 CCDC180Q9P1Z9 1646 aa27.2■■□□□ 1.95
AP3M2-217ENST00000530375 ABCC9O60706 1549 aa26.76■■□□□ 1.87
AP3M2-217ENST00000530375 RB1CC1Q8TDY2 1594 aa25.69■■□□□ 1.7
AP3M2-217ENST00000530375 NACADO15069 1562 aa25.65■■□□□ 1.7
AP3M2-217ENST00000530375 DCAF8L2P0C7V8 631 aa25.58■■□□□ 1.69
AP3M2-217ENST00000530375 MYO15BQ96JP2 1530 aa25.49■■□□□ 1.67
AP3M2-217ENST00000530375 ZCCHC6Q5VYS8 1495 aaKnown RBP25.44■■□□□ 1.66
AP3M2-217ENST00000530375 DCAF1Q9Y4B6 1507 aa25.32■■□□□ 1.64
AP3M2-217ENST00000530375 UNC13AQ9UPW8 1703 aa25.04■■□□□ 1.6
AP3M2-217ENST00000530375 PABPN1Q86U42 306 aaKnown RBP eCLIP25.02■■□□□ 1.6
AP3M2-217ENST00000530375 PHF23Q9BUL5 403 aaPredicted RBP24.93■■□□□ 1.58
AP3M2-217ENST00000530375 SENP3Q9H4L4 574 aaPredicted RBP24.93■■□□□ 1.58
AP3M2-217ENST00000530375 BICRAQ9NZM4 1560 aa24.93■■□□□ 1.58
AP3M2-217ENST00000530375 SCRIBQ14160 1630 aa24.79■■□□□ 1.56
AP3M2-217ENST00000530375 DNAJC5BQ9UF47 199 aa24.75■■□□□ 1.55
AP3M2-217ENST00000530375 SHROOM4Q9ULL8 1493 aa24.7■■□□□ 1.54
AP3M2-217ENST00000530375 EIF4G1Q04637 1599 aaKnown RBP24.27■■□□□ 1.48
AP3M2-217ENST00000530375 CC2D2AQ9P2K1 1620 aa24.2■■□□□ 1.46
AP3M2-217ENST00000530375 CECR2Q9BXF3 1484 aa24.08■■□□□ 1.45
AP3M2-217ENST00000530375 SMARCA4P51532 1647 aa23.73■■□□□ 1.39
AP3M2-217ENST00000530375 BAZ1AQ9NRL2 1556 aaPredicted RBP23.7■■□□□ 1.38
AP3M2-217ENST00000530375 NCAPD3P42695 1498 aa23.7■■□□□ 1.38
AP3M2-217ENST00000530375 ATAD2BQ9ULI0 1458 aa23.68■■□□□ 1.38
AP3M2-217ENST00000530375 SMARCA2P51531 1590 aa23.62■■□□□ 1.37
AP3M2-217ENST00000530375 MROH2BQ7Z745 1585 aa23.55■■□□□ 1.36
AP3M2-217ENST00000530375 HMGXB3Q12766 1538 aa23.54■■□□□ 1.36
AP3M2-217ENST00000530375 PEG3Q9GZU2 1588 aa23.53■■□□□ 1.36
AP3M2-217ENST00000530375 BAZ1BQ9UIG0 1483 aaKnown RBP23.44■■□□□ 1.34
AP3M2-217ENST00000530375 WIZO95785 1651 aa23.25■■□□□ 1.31
AP3M2-217ENST00000530375 RSF1Q96T23 1441 aaPredicted RBP23.25■■□□□ 1.31
AP3M2-217ENST00000530375 NESP48681 1621 aa23.12■■□□□ 1.29
AP3M2-217ENST00000530375 PLPPR3Q6T4P5 718 aa23.1■■□□□ 1.29
AP3M2-217ENST00000530375 FOXD1Q16676 465 aa23.08■■□□□ 1.29
AP3M2-217ENST00000530375 ERCC6Q03468 1493 aa23.08■■□□□ 1.29
AP3M2-217ENST00000530375 LAMC3Q9Y6N6 1575 aa23.06■■□□□ 1.28
AP3M2-217ENST00000530375 TOP2AP11388 1531 aaKnown RBP23.03■■□□□ 1.28
AP3M2-217ENST00000530375 CADPSQ9ULU8 1353 aa23■■□□□ 1.27
AP3M2-217ENST00000530375 PDS5BQ9NTI5 1447 aa22.93■■□□□ 1.26
AP3M2-217ENST00000530375 CUX2O14529 1486 aa22.92■■□□□ 1.26
AP3M2-217ENST00000530375 CFTRP13569 1480 aa22.83■■□□□ 1.25
AP3M2-217ENST00000530375 KIF21AQ7Z4S6 1674 aa22.79■■□□□ 1.24
AP3M2-217ENST00000530375 THOC2Q8NI27 1593 aaKnown RBP22.78■■□□□ 1.24
AP3M2-217ENST00000530375 CCDC88BA6NC98 1476 aa22.78■■□□□ 1.24
AP3M2-217ENST00000530375 FANCD2Q9BXW9 1451 aa22.71■■□□□ 1.23
AP3M2-217ENST00000530375 MRC2Q9UBG0 1479 aa22.69■■□□□ 1.22
AP3M2-217ENST00000530375 CEP164Q9UPV0 1460 aa22.68■■□□□ 1.22
AP3M2-217ENST00000530375 WDR62O43379 1518 aa22.62■■□□□ 1.21
AP3M2-217ENST00000530375 PRDM2Q13029 1718 aa22.54■■□□□ 1.2
AP3M2-217ENST00000530375 SUPT5HO00267 1087 aaKnown RBP22.53■■□□□ 1.2
AP3M2-217ENST00000530375 URB2Q14146 1524 aaKnown RBP22.48■■□□□ 1.19
AP3M2-217ENST00000530375 DNAJC5Q9H3Z4 198 aa22.42■■□□□ 1.18
AP3M2-217ENST00000530375 ABCC8Q09428 1581 aa22.34■■□□□ 1.17
AP3M2-217ENST00000530375 TOPBP1Q92547 1522 aa22.32■■□□□ 1.16
AP3M2-217ENST00000530375 DNMBPQ6XZF7 1577 aa22.27■■□□□ 1.16
AP3M2-217ENST00000530375 IFT140Q96RY7 1462 aa22.24■■□□□ 1.15
AP3M2-217ENST00000530375 ZNF608Q9ULD9 1512 aaPredicted RBP22.12■■□□□ 1.13
AP3M2-217ENST00000530375 POLA1P09884 1462 aaPredicted RBP22.12■■□□□ 1.13
AP3M2-217ENST00000530375 CUX1P39880 1505 aa22.1■■□□□ 1.13
AP3M2-217ENST00000530375 TARBP1Q13395 1621 aaKnown RBP22.07■■□□□ 1.12
AP3M2-217ENST00000530375 ADRA2BP18089 450 aa22.07■■□□□ 1.12
AP3M2-217ENST00000530375 PPP6R1Q9UPN7 881 aa22.06■■□□□ 1.12
AP3M2-217ENST00000530375 SOGA1O94964 1423 aa22.06■■□□□ 1.12
AP3M2-217ENST00000530375 FGD5Q6ZNL6 1462 aa22.04■■□□□ 1.12
AP3M2-217ENST00000530375 RAD54L2Q9Y4B4 1467 aa22.03■■□□□ 1.12
AP3M2-217ENST00000530375 EIF4G3O43432 1585 aaKnown RBP21.99■■□□□ 1.11
AP3M2-217ENST00000530375 AQRO60306 1485 aaKnown RBP eCLIP21.99■■□□□ 1.11
AP3M2-217ENST00000530375 OSCARQ8IYS5 282 aa21.98■■□□□ 1.11
AP3M2-217ENST00000530375 TDRD9Q8NDG6 1382 aaKnown RBP21.93■■□□□ 1.1
AP3M2-217ENST00000530375 WRNQ14191 1432 aaPredicted RBP eCLIP21.92■■□□□ 1.1
AP3M2-217ENST00000530375 WDR97A6NE52 1622 aa21.91■■□□□ 1.1
AP3M2-217ENST00000530375 TOP2BQ02880 1626 aa21.87■■□□□ 1.09
AP3M2-217ENST00000530375 ABCA10Q8WWZ4 1543 aa21.85■■□□□ 1.09
AP3M2-217ENST00000530375 BIVM-ERCC5R4GMW8 1640 aa21.84■■□□□ 1.09
AP3M2-217ENST00000530375 SYNJ1O43426 1573 aa21.83■■□□□ 1.09
AP3M2-217ENST00000530375 GRIN2BQ13224 1484 aa21.81■■□□□ 1.08
AP3M2-217ENST00000530375 PIAS4Q8N2W9 510 aaPredicted RBP21.79■■□□□ 1.08
AP3M2-217ENST00000530375 GAPVD1Q14C86 1478 aa21.78■■□□□ 1.08
AP3M2-217ENST00000530375 SNAPC4Q5SXM2 1469 aa21.77■■□□□ 1.08
AP3M2-217ENST00000530375 MAGI1Q96QZ7 1491 aaPredicted RBP21.76■■□□□ 1.07
AP3M2-217ENST00000530375 FBLN2P98095 1184 aa21.74■■□□□ 1.07
AP3M2-217ENST00000530375 ABCA5Q8WWZ7 1642 aa21.73■■□□□ 1.07
AP3M2-217ENST00000530375 CHD1O14646 1710 aa21.72■■□□□ 1.07
AP3M2-217ENST00000530375 CHMP7Q8WUX9 453 aaPredicted RBP21.69■■□□□ 1.06
AP3M2-217ENST00000530375 SYNJ2O15056 1496 aa21.68■■□□□ 1.06
AP3M2-217ENST00000530375 PBRM1Q86U86 1689 aa21.67■■□□□ 1.06
AP3M2-217ENST00000530375 ARHGEF11O15085 1522 aa21.57■■□□□ 1.04
AP3M2-217ENST00000530375 ERICH3Q5RHP9 1530 aa21.57■■□□□ 1.04
AP3M2-217ENST00000530375 RIMBP3CA6NJZ7 1639 aa21.56■■□□□ 1.04
AP3M2-217ENST00000530375 RIMBP3BA6NNM3 1639 aa21.56■■□□□ 1.04
AP3M2-217ENST00000530375 RIMBP3Q9UFD9 1639 aa21.56■■□□□ 1.04
AP3M2-217ENST00000530375 TRIM41Q8WV44 630 aa21.55■■□□□ 1.04
AP3M2-217ENST00000530375 CLASP1Q7Z460 1538 aa21.55■■□□□ 1.04
AP3M2-217ENST00000530375 FHAD1B1AJZ9 1412 aa21.55■■□□□ 1.04
AP3M2-217ENST00000530375 ADAMTS12P58397 1594 aa21.53■■□□□ 1.04
AP3M2-217ENST00000530375 GRIN2AQ12879 1464 aa21.52■■□□□ 1.03
AP3M2-217ENST00000530375 KIF27Q86VH2 1401 aa21.48■■□□□ 1.03
AP3M2-217ENST00000530375 NUP160Q12769 1436 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms