RNA–Protein interactions for RNA: ENST00000530302.1

CLINT1-209, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-209ENST00000530302 AEBP2Q6ZN18 517 aaPredicted RBP18.32■□□□□ 0.52
CLINT1-209ENST00000530302 NISCHQ9Y2I1 1504 aa18■□□□□ 0.47
CLINT1-209ENST00000530302 CHIC1Q5VXU3 224 aa17.02■□□□□ 0.32
CLINT1-209ENST00000530302 CCDC180Q9P1Z9 1646 aa16.02■□□□□ 0.16
CLINT1-209ENST00000530302 ABCC9O60706 1549 aa15.72■□□□□ 0.11
CLINT1-209ENST00000530302 SENP3Q9H4L4 574 aaPredicted RBP15.71■□□□□ 0.11
CLINT1-209ENST00000530302 POTEDQ86YR6 584 aa15.47■□□□□ 0.07
CLINT1-209ENST00000530302 PHF23Q9BUL5 403 aaPredicted RBP15.4■□□□□ 0.06
CLINT1-209ENST00000530302 RB1CC1Q8TDY2 1594 aa15.06■□□□□ 0
CLINT1-209ENST00000530302 NACADO15069 1562 aa15.03■□□□□ -0
CLINT1-209ENST00000530302 ZCCHC6Q5VYS8 1495 aaKnown RBP15.01□□□□□ -0.01
CLINT1-209ENST00000530302 DCAF8L2P0C7V8 631 aa14.98□□□□□ -0.01
CLINT1-209ENST00000530302 MYO15BQ96JP2 1530 aa14.92□□□□□ -0.02
CLINT1-209ENST00000530302 DCAF1Q9Y4B6 1507 aa14.87□□□□□ -0.03
CLINT1-209ENST00000530302 UNC13AQ9UPW8 1703 aa14.83□□□□□ -0.03
CLINT1-209ENST00000530302 FOXD1Q16676 465 aa14.8□□□□□ -0.04
CLINT1-209ENST00000530302 BICRAQ9NZM4 1560 aa14.69□□□□□ -0.06
CLINT1-209ENST00000530302 PABPN1Q86U42 306 aaKnown RBP eCLIP14.67□□□□□ -0.06
CLINT1-209ENST00000530302 SCRIBQ14160 1630 aa14.66□□□□□ -0.06
CLINT1-209ENST00000530302 DNAJC5BQ9UF47 199 aa14.47□□□□□ -0.09
CLINT1-209ENST00000530302 SHROOM4Q9ULL8 1493 aa14.42□□□□□ -0.1
CLINT1-209ENST00000530302 EIF4G1Q04637 1599 aaKnown RBP14.27□□□□□ -0.12
CLINT1-209ENST00000530302 CC2D2AQ9P2K1 1620 aa14.23□□□□□ -0.13
CLINT1-209ENST00000530302 MSH5O43196 834 aa14.16□□□□□ -0.14
CLINT1-209ENST00000530302 CECR2Q9BXF3 1484 aa14.1□□□□□ -0.15
CLINT1-209ENST00000530302 SMARCA4P51532 1647 aa14□□□□□ -0.17
CLINT1-209ENST00000530302 BAZ1AQ9NRL2 1556 aaPredicted RBP13.93□□□□□ -0.18
CLINT1-209ENST00000530302 MROH2BQ7Z745 1585 aa13.92□□□□□ -0.18
CLINT1-209ENST00000530302 ATAD2BQ9ULI0 1458 aa13.91□□□□□ -0.18
CLINT1-209ENST00000530302 NCAPD3P42695 1498 aa13.87□□□□□ -0.19
CLINT1-209ENST00000530302 SMARCA2P51531 1590 aa13.85□□□□□ -0.19
CLINT1-209ENST00000530302 PEG3Q9GZU2 1588 aa13.84□□□□□ -0.19
CLINT1-209ENST00000530302 HMGXB3Q12766 1538 aa13.83□□□□□ -0.2
CLINT1-209ENST00000530302 BAZ1BQ9UIG0 1483 aaKnown RBP13.78□□□□□ -0.2
CLINT1-209ENST00000530302 WIZO95785 1651 aa13.78□□□□□ -0.2
CLINT1-209ENST00000530302 RSF1Q96T23 1441 aaPredicted RBP13.72□□□□□ -0.21
CLINT1-209ENST00000530302 NESP48681 1621 aa13.63□□□□□ -0.23
CLINT1-209ENST00000530302 TOP2AP11388 1531 aaKnown RBP13.59□□□□□ -0.23
CLINT1-209ENST00000530302 PIAS4Q8N2W9 510 aaPredicted RBP13.55□□□□□ -0.24
CLINT1-209ENST00000530302 LAMC3Q9Y6N6 1575 aa13.52□□□□□ -0.25
CLINT1-209ENST00000530302 ERCC6Q03468 1493 aa13.5□□□□□ -0.25
CLINT1-209ENST00000530302 KIF21AQ7Z4S6 1674 aa13.47□□□□□ -0.25
CLINT1-209ENST00000530302 CADPSQ9ULU8 1353 aa13.45□□□□□ -0.26
CLINT1-209ENST00000530302 THOC2Q8NI27 1593 aaKnown RBP13.43□□□□□ -0.26
CLINT1-209ENST00000530302 CCDC88BA6NC98 1476 aa13.42□□□□□ -0.26
CLINT1-209ENST00000530302 CFTRP13569 1480 aa13.4□□□□□ -0.26
CLINT1-209ENST00000530302 PDS5BQ9NTI5 1447 aa13.39□□□□□ -0.27
CLINT1-209ENST00000530302 CUX2O14529 1486 aa13.36□□□□□ -0.27
CLINT1-209ENST00000530302 PRDM2Q13029 1718 aa13.34□□□□□ -0.27
CLINT1-209ENST00000530302 FANCD2Q9BXW9 1451 aa13.34□□□□□ -0.27
CLINT1-209ENST00000530302 MRC2Q9UBG0 1479 aa13.3□□□□□ -0.28
CLINT1-209ENST00000530302 CEP164Q9UPV0 1460 aa13.3□□□□□ -0.28
CLINT1-209ENST00000530302 SUPT5HO00267 1087 aaKnown RBP13.3□□□□□ -0.28
CLINT1-209ENST00000530302 WDR62O43379 1518 aa13.29□□□□□ -0.28
CLINT1-209ENST00000530302 URB2Q14146 1524 aaKnown RBP13.24□□□□□ -0.29
CLINT1-209ENST00000530302 PPP6R1Q9UPN7 881 aa13.14□□□□□ -0.31
CLINT1-209ENST00000530302 TOPBP1Q92547 1522 aa13.13□□□□□ -0.31
CLINT1-209ENST00000530302 DNMBPQ6XZF7 1577 aa13.11□□□□□ -0.31
CLINT1-209ENST00000530302 CUX1P39880 1505 aa13.06□□□□□ -0.32
CLINT1-209ENST00000530302 ZNF608Q9ULD9 1512 aaPredicted RBP13.03□□□□□ -0.32
CLINT1-209ENST00000530302 ABCC8Q09428 1581 aa13.03□□□□□ -0.32
CLINT1-209ENST00000530302 POLA1P09884 1462 aaPredicted RBP13.03□□□□□ -0.32
CLINT1-209ENST00000530302 ADRA2BP18089 450 aa13.02□□□□□ -0.33
CLINT1-209ENST00000530302 IFT140Q96RY7 1462 aa13.02□□□□□ -0.33
CLINT1-209ENST00000530302 TARBP1Q13395 1621 aaKnown RBP13.02□□□□□ -0.33
CLINT1-209ENST00000530302 FGD5Q6ZNL6 1462 aa12.99□□□□□ -0.33
CLINT1-209ENST00000530302 RAD54L2Q9Y4B4 1467 aa12.98□□□□□ -0.33
CLINT1-209ENST00000530302 EIF4G3O43432 1585 aaKnown RBP12.98□□□□□ -0.33
CLINT1-209ENST00000530302 DNAJC5Q9H3Z4 198 aa12.97□□□□□ -0.33
CLINT1-209ENST00000530302 SYNJ1O43426 1573 aa12.95□□□□□ -0.34
CLINT1-209ENST00000530302 WDR97A6NE52 1622 aa12.93□□□□□ -0.34
CLINT1-209ENST00000530302 AQRO60306 1485 aaKnown RBP eCLIP12.92□□□□□ -0.342e-8■■□□□ 13.4
CLINT1-209ENST00000530302 SOGA1O94964 1423 aa12.92□□□□□ -0.34
CLINT1-209ENST00000530302 BIVM-ERCC5R4GMW8 1640 aa12.91□□□□□ -0.34
CLINT1-209ENST00000530302 TOP2BQ02880 1626 aa12.91□□□□□ -0.34
CLINT1-209ENST00000530302 WRNQ14191 1432 aaPredicted RBP eCLIP12.9□□□□□ -0.34
CLINT1-209ENST00000530302 TDRD9Q8NDG6 1382 aaKnown RBP12.89□□□□□ -0.35
CLINT1-209ENST00000530302 ABCA10Q8WWZ4 1543 aa12.84□□□□□ -0.35
CLINT1-209ENST00000530302 CHD1O14646 1710 aa12.84□□□□□ -0.35
CLINT1-209ENST00000530302 ABCA5Q8WWZ7 1642 aa12.84□□□□□ -0.35
CLINT1-209ENST00000530302 PBRM1Q86U86 1689 aa12.82□□□□□ -0.36
CLINT1-209ENST00000530302 SNAPC4Q5SXM2 1469 aa12.81□□□□□ -0.36
CLINT1-209ENST00000530302 GAPVD1Q14C86 1478 aa12.78□□□□□ -0.36
CLINT1-209ENST00000530302 GRIN2BQ13224 1484 aa12.78□□□□□ -0.36
CLINT1-209ENST00000530302 OSCARQ8IYS5 282 aa12.75□□□□□ -0.37
CLINT1-209ENST00000530302 MAGI1Q96QZ7 1491 aaPredicted RBP12.75□□□□□ -0.37
CLINT1-209ENST00000530302 CACNB1Q02641 598 aaPredicted RBP12.72□□□□□ -0.37
CLINT1-209ENST00000530302 ADAMTS12P58397 1594 aa12.72□□□□□ -0.37
CLINT1-209ENST00000530302 FBLN2P98095 1184 aa12.71□□□□□ -0.37
CLINT1-209ENST00000530302 SYNJ2O15056 1496 aa12.71□□□□□ -0.38
CLINT1-209ENST00000530302 PLPPR3Q6T4P5 718 aa12.68□□□□□ -0.38
CLINT1-209ENST00000530302 ERICH3Q5RHP9 1530 aa12.67□□□□□ -0.38
CLINT1-209ENST00000530302 CLASP1Q7Z460 1538 aa12.67□□□□□ -0.38
CLINT1-209ENST00000530302 RIMBP3CA6NJZ7 1639 aa12.67□□□□□ -0.38
CLINT1-209ENST00000530302 RIMBP3BA6NNM3 1639 aa12.67□□□□□ -0.38
CLINT1-209ENST00000530302 RIMBP3Q9UFD9 1639 aa12.67□□□□□ -0.38
CLINT1-209ENST00000530302 CHMP7Q8WUX9 453 aaPredicted RBP12.65□□□□□ -0.38
CLINT1-209ENST00000530302 ARHGEF11O15085 1522 aa12.65□□□□□ -0.38
CLINT1-209ENST00000530302 GRIN2AQ12879 1464 aa12.64□□□□□ -0.39
CLINT1-209ENST00000530302 FHAD1B1AJZ9 1412 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms