RNA–Protein interactions for RNA: ENST00000530294.5

PPFIA1-213, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 5

Gene PPFIA1, Length 977 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-213ENST00000530294 NISCHQ9Y2I1 1504 aa22.98■■□□□ 1.27
PPFIA1-213ENST00000530294 ABCC9O60706 1549 aa20.76■□□□□ 0.91
PPFIA1-213ENST00000530294 CCDC180Q9P1Z9 1646 aa20.75■□□□□ 0.91
PPFIA1-213ENST00000530294 RB1CC1Q8TDY2 1594 aa19.74■□□□□ 0.75
PPFIA1-213ENST00000530294 DNAJC5BQ9UF47 199 aa19.74■□□□□ 0.75
PPFIA1-213ENST00000530294 NACADO15069 1562 aa19.61■□□□□ 0.73
PPFIA1-213ENST00000530294 UNC13AQ9UPW8 1703 aa19.48■□□□□ 0.71
PPFIA1-213ENST00000530294 MYO15BQ96JP2 1530 aa19.37■□□□□ 0.69
PPFIA1-213ENST00000530294 BICRAQ9NZM4 1560 aa19.29■□□□□ 0.68
PPFIA1-213ENST00000530294 PABPN1Q86U42 306 aaKnown RBP eCLIP19.25■□□□□ 0.67
PPFIA1-213ENST00000530294 DCAF8L2P0C7V8 631 aa19.2■□□□□ 0.66
PPFIA1-213ENST00000530294 DCAF1Q9Y4B6 1507 aa19.04■□□□□ 0.64
PPFIA1-213ENST00000530294 ZCCHC6Q5VYS8 1495 aaKnown RBP19.01■□□□□ 0.63
PPFIA1-213ENST00000530294 SHROOM4Q9ULL8 1493 aa18.97■□□□□ 0.63
PPFIA1-213ENST00000530294 CC2D2AQ9P2K1 1620 aa18.83■□□□□ 0.61
PPFIA1-213ENST00000530294 SCRIBQ14160 1630 aa18.75■□□□□ 0.59
PPFIA1-213ENST00000530294 EIF4G1Q04637 1599 aaKnown RBP18.75■□□□□ 0.59
PPFIA1-213ENST00000530294 CECR2Q9BXF3 1484 aa18.73■□□□□ 0.59
PPFIA1-213ENST00000530294 DNAJC5Q9H3Z4 198 aa18.23■□□□□ 0.51
PPFIA1-213ENST00000530294 NCAPD3P42695 1498 aa18.13■□□□□ 0.49
PPFIA1-213ENST00000530294 CUX2O14529 1486 aa18.02■□□□□ 0.48
PPFIA1-213ENST00000530294 ATAD2BQ9ULI0 1458 aa18.01■□□□□ 0.47
PPFIA1-213ENST00000530294 SMARCA4P51532 1647 aa17.96■□□□□ 0.47
PPFIA1-213ENST00000530294 HMGXB3Q12766 1538 aa17.96■□□□□ 0.47
PPFIA1-213ENST00000530294 SMARCA2P51531 1590 aa17.93■□□□□ 0.46
PPFIA1-213ENST00000530294 PEG3Q9GZU2 1588 aa17.87■□□□□ 0.45
PPFIA1-213ENST00000530294 ERCC6Q03468 1493 aa17.86■□□□□ 0.45
PPFIA1-213ENST00000530294 NESP48681 1621 aa17.83■□□□□ 0.45
PPFIA1-213ENST00000530294 BAZ1AQ9NRL2 1556 aaPredicted RBP17.81■□□□□ 0.44
PPFIA1-213ENST00000530294 THOC2Q8NI27 1593 aaKnown RBP17.76■□□□□ 0.43
PPFIA1-213ENST00000530294 BAZ1BQ9UIG0 1483 aaKnown RBP17.75■□□□□ 0.43
PPFIA1-213ENST00000530294 LAMC3Q9Y6N6 1575 aa17.72■□□□□ 0.43
PPFIA1-213ENST00000530294 MROH2BQ7Z745 1585 aa17.69■□□□□ 0.42
PPFIA1-213ENST00000530294 KIF21AQ7Z4S6 1674 aa17.67■□□□□ 0.42
PPFIA1-213ENST00000530294 PDS5BQ9NTI5 1447 aa17.54■□□□□ 0.4
PPFIA1-213ENST00000530294 CADPSQ9ULU8 1353 aa17.5■□□□□ 0.39
PPFIA1-213ENST00000530294 WIZO95785 1651 aa17.48■□□□□ 0.39
PPFIA1-213ENST00000530294 WDR62O43379 1518 aa17.45■□□□□ 0.38
PPFIA1-213ENST00000530294 MRC2Q9UBG0 1479 aa17.42■□□□□ 0.38
PPFIA1-213ENST00000530294 CFTRP13569 1480 aa17.31■□□□□ 0.36
PPFIA1-213ENST00000530294 CEP164Q9UPV0 1460 aa17.3■□□□□ 0.36
PPFIA1-213ENST00000530294 FANCD2Q9BXW9 1451 aa17.28■□□□□ 0.36
PPFIA1-213ENST00000530294 RSF1Q96T23 1441 aaPredicted RBP17.25■□□□□ 0.35
PPFIA1-213ENST00000530294 TOP2AP11388 1531 aaKnown RBP17.21■□□□□ 0.35
PPFIA1-213ENST00000530294 PRDM2Q13029 1718 aa17.21■□□□□ 0.35
PPFIA1-213ENST00000530294 URB2Q14146 1524 aaKnown RBP17.2■□□□□ 0.34
PPFIA1-213ENST00000530294 TRIM41Q8WV44 630 aa17.15■□□□□ 0.34
PPFIA1-213ENST00000530294 OSCARQ8IYS5 282 aa17.11■□□□□ 0.33
PPFIA1-213ENST00000530294 CCDC88BA6NC98 1476 aa17.03■□□□□ 0.32
PPFIA1-213ENST00000530294 ZNF608Q9ULD9 1512 aaPredicted RBP16.99■□□□□ 0.31
PPFIA1-213ENST00000530294 RIMBP3CA6NJZ7 1639 aa16.99■□□□□ 0.31
PPFIA1-213ENST00000530294 RIMBP3BA6NNM3 1639 aa16.99■□□□□ 0.31
PPFIA1-213ENST00000530294 RIMBP3Q9UFD9 1639 aa16.99■□□□□ 0.31
PPFIA1-213ENST00000530294 IFT140Q96RY7 1462 aa16.98■□□□□ 0.31
PPFIA1-213ENST00000530294 TOPBP1Q92547 1522 aa16.97■□□□□ 0.31
PPFIA1-213ENST00000530294 ABCC8Q09428 1581 aa16.92■□□□□ 0.3
PPFIA1-213ENST00000530294 TARBP1Q13395 1621 aaKnown RBP16.91■□□□□ 0.3
PPFIA1-213ENST00000530294 EIF4G3O43432 1585 aaKnown RBP16.89■□□□□ 0.3
PPFIA1-213ENST00000530294 ARHGEF11O15085 1522 aa16.89■□□□□ 0.29
PPFIA1-213ENST00000530294 DNMBPQ6XZF7 1577 aa16.89■□□□□ 0.29
PPFIA1-213ENST00000530294 CHD1O14646 1710 aa16.85■□□□□ 0.29
PPFIA1-213ENST00000530294 AQRO60306 1485 aaKnown RBP eCLIP16.79■□□□□ 0.283e-6■■■■■ 30
PPFIA1-213ENST00000530294 POLA1P09884 1462 aaPredicted RBP16.78■□□□□ 0.28
PPFIA1-213ENST00000530294 ARAP1Q96P48 1450 aa16.72■□□□□ 0.27
PPFIA1-213ENST00000530294 WDR97A6NE52 1622 aa16.7■□□□□ 0.26
PPFIA1-213ENST00000530294 RAD54L2Q9Y4B4 1467 aa16.69■□□□□ 0.26
PPFIA1-213ENST00000530294 CYB5RLQ6IPT4 315 aa16.68■□□□□ 0.26
PPFIA1-213ENST00000530294 CLASP1Q7Z460 1538 aa16.65■□□□□ 0.26
PPFIA1-213ENST00000530294 SOGA1O94964 1423 aa16.65■□□□□ 0.26
PPFIA1-213ENST00000530294 TDRD9Q8NDG6 1382 aaKnown RBP16.63■□□□□ 0.25
PPFIA1-213ENST00000530294 FGD5Q6ZNL6 1462 aa16.62■□□□□ 0.25
PPFIA1-213ENST00000530294 CUX1P39880 1505 aa16.62■□□□□ 0.25
PPFIA1-213ENST00000530294 SNAPC4Q5SXM2 1469 aa16.59■□□□□ 0.25
PPFIA1-213ENST00000530294 MAGI1Q96QZ7 1491 aaPredicted RBP16.59■□□□□ 0.25
PPFIA1-213ENST00000530294 FBLN2P98095 1184 aa16.55■□□□□ 0.24
PPFIA1-213ENST00000530294 SYNJ1O43426 1573 aa16.55■□□□□ 0.24
PPFIA1-213ENST00000530294 PBRM1Q86U86 1689 aa16.54■□□□□ 0.24
PPFIA1-213ENST00000530294 GRIN2BQ13224 1484 aa16.54■□□□□ 0.24
PPFIA1-213ENST00000530294 SYNJ2O15056 1496 aa16.52■□□□□ 0.23
PPFIA1-213ENST00000530294 ABCA5Q8WWZ7 1642 aa16.49■□□□□ 0.23
PPFIA1-213ENST00000530294 ABCA10Q8WWZ4 1543 aa16.47■□□□□ 0.23
PPFIA1-213ENST00000530294 CHMP7Q8WUX9 453 aaPredicted RBP16.47■□□□□ 0.23
PPFIA1-213ENST00000530294 GAPVD1Q14C86 1478 aa16.46■□□□□ 0.23
PPFIA1-213ENST00000530294 TRHP20396 242 aaPredicted RBP16.45■□□□□ 0.22
PPFIA1-213ENST00000530294 BIVM-ERCC5R4GMW8 1640 aa16.37■□□□□ 0.21
PPFIA1-213ENST00000530294 ERCC6L2Q5T890 1561 aa16.36■□□□□ 0.21
PPFIA1-213ENST00000530294 SHROOM2Q13796 1616 aa16.35■□□□□ 0.21
PPFIA1-213ENST00000530294 NUP160Q12769 1436 aa16.35■□□□□ 0.21
PPFIA1-213ENST00000530294 GRIN2AQ12879 1464 aa16.35■□□□□ 0.21
PPFIA1-213ENST00000530294 ADAMTS12P58397 1594 aa16.34■□□□□ 0.21
PPFIA1-213ENST00000530294 CEP170Q5SW79 1584 aa16.34■□□□□ 0.21
PPFIA1-213ENST00000530294 TOP2BQ02880 1626 aa16.33■□□□□ 0.2
PPFIA1-213ENST00000530294 WRNQ14191 1432 aaPredicted RBP eCLIP16.29■□□□□ 0.2
PPFIA1-213ENST00000530294 ERICH3Q5RHP9 1530 aa16.26■□□□□ 0.19
PPFIA1-213ENST00000530294 KIF13AQ9H1H9 1805 aa16.26■□□□□ 0.19
PPFIA1-213ENST00000530294 FHAD1B1AJZ9 1412 aa16.25■□□□□ 0.19
PPFIA1-213ENST00000530294 SUPT5HO00267 1087 aaKnown RBP16.15■□□□□ 0.18
PPFIA1-213ENST00000530294 RUSC2Q8N2Y8 1516 aa16.12■□□□□ 0.17
PPFIA1-213ENST00000530294 PRG4Q92954 1404 aaPredicted RBP16.11■□□□□ 0.17
PPFIA1-213ENST00000530294 JPH4Q96JJ6 628 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms