RNA–Protein interactions for RNA: ENST00000530258.1

GPAA1-213, Transcript of glycosylphosphatidylinositol anchor attachment 1, humanhuman

TSL 4

Gene GPAA1, Length 535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAA1-213ENST00000530258 NISCHQ9Y2I1 1504 aa49.24■■■■■ 5.47
GPAA1-213ENST00000530258 CCDC180Q9P1Z9 1646 aa43.78■■■■■ 4.6
GPAA1-213ENST00000530258 ABCC9O60706 1549 aa43.31■■■■■ 4.52
GPAA1-213ENST00000530258 RB1CC1Q8TDY2 1594 aa41.43■■■■■ 4.22
GPAA1-213ENST00000530258 NACADO15069 1562 aa41.34■■■■■ 4.21
GPAA1-213ENST00000530258 DCAF8L2P0C7V8 631 aa41.31■■■■■ 4.2
GPAA1-213ENST00000530258 MYO15BQ96JP2 1530 aa41.04■■■■■ 4.16
GPAA1-213ENST00000530258 ZCCHC6Q5VYS8 1495 aaKnown RBP40.91■■■■■ 4.14
GPAA1-213ENST00000530258 DCAF1Q9Y4B6 1507 aa40.72■■■■■ 4.11
GPAA1-213ENST00000530258 PABPN1Q86U42 306 aaKnown RBP eCLIP40.5■■■■■ 4.07
GPAA1-213ENST00000530258 UNC13AQ9UPW8 1703 aa40.41■■■■■ 4.06
GPAA1-213ENST00000530258 BICRAQ9NZM4 1560 aa40.28■■■■■ 4.04
GPAA1-213ENST00000530258 DNAJC5BQ9UF47 199 aa40.28■■■■■ 4.04
GPAA1-213ENST00000530258 SCRIBQ14160 1630 aa39.94■■■■□ 3.99
GPAA1-213ENST00000530258 SHROOM4Q9ULL8 1493 aa39.77■■■■□ 3.96
GPAA1-213ENST00000530258 EIF4G1Q04637 1599 aaKnown RBP39.2■■■■□ 3.87
GPAA1-213ENST00000530258 CC2D2AQ9P2K1 1620 aa39.11■■■■□ 3.85
GPAA1-213ENST00000530258 CECR2Q9BXF3 1484 aa38.96■■■■□ 3.83
GPAA1-213ENST00000530258 NCAPD3P42695 1498 aa38.26■■■■□ 3.72
GPAA1-213ENST00000530258 SMARCA4P51532 1647 aa38.21■■■■□ 3.71
GPAA1-213ENST00000530258 ATAD2BQ9ULI0 1458 aa38.19■■■■□ 3.7
GPAA1-213ENST00000530258 BAZ1AQ9NRL2 1556 aaPredicted RBP38.12■■■■□ 3.69
GPAA1-213ENST00000530258 SMARCA2P51531 1590 aa38.04■■■■□ 3.68
GPAA1-213ENST00000530258 MROH2BQ7Z745 1585 aa37.95■■■■□ 3.67
GPAA1-213ENST00000530258 HMGXB3Q12766 1538 aa37.92■■■■□ 3.66
GPAA1-213ENST00000530258 PEG3Q9GZU2 1588 aa37.89■■■■□ 3.66
GPAA1-213ENST00000530258 BAZ1BQ9UIG0 1483 aaKnown RBP37.77■■■■□ 3.64
GPAA1-213ENST00000530258 WIZO95785 1651 aa37.44■■■■□ 3.58
GPAA1-213ENST00000530258 RSF1Q96T23 1441 aaPredicted RBP37.43■■■■□ 3.58
GPAA1-213ENST00000530258 NESP48681 1621 aa37.39■■■■□ 3.58
GPAA1-213ENST00000530258 ERCC6Q03468 1493 aa37.29■■■■□ 3.56
GPAA1-213ENST00000530258 LAMC3Q9Y6N6 1575 aa37.18■■■■□ 3.54
GPAA1-213ENST00000530258 CADPSQ9ULU8 1353 aa37.11■■■■□ 3.53
GPAA1-213ENST00000530258 CUX2O14529 1486 aa37.08■■■■□ 3.53
GPAA1-213ENST00000530258 TOP2AP11388 1531 aaKnown RBP37.03■■■■□ 3.52
GPAA1-213ENST00000530258 PDS5BQ9NTI5 1447 aa37■■■■□ 3.51
GPAA1-213ENST00000530258 THOC2Q8NI27 1593 aaKnown RBP36.82■■■■□ 3.48
GPAA1-213ENST00000530258 CFTRP13569 1480 aa36.81■■■■□ 3.48
GPAA1-213ENST00000530258 KIF21AQ7Z4S6 1674 aa36.8■■■■□ 3.48
GPAA1-213ENST00000530258 CCDC88BA6NC98 1476 aa36.69■■■■□ 3.46
GPAA1-213ENST00000530258 FANCD2Q9BXW9 1451 aa36.62■■■■□ 3.45
GPAA1-213ENST00000530258 MRC2Q9UBG0 1479 aa36.61■■■■□ 3.45
GPAA1-213ENST00000530258 CEP164Q9UPV0 1460 aa36.56■■■■□ 3.44
GPAA1-213ENST00000530258 DNAJC5Q9H3Z4 198 aa36.51■■■■□ 3.44
GPAA1-213ENST00000530258 WDR62O43379 1518 aa36.5■■■■□ 3.43
GPAA1-213ENST00000530258 URB2Q14146 1524 aaKnown RBP36.3■■■■□ 3.4
GPAA1-213ENST00000530258 PRDM2Q13029 1718 aa36.22■■■■□ 3.39
GPAA1-213ENST00000530258 SUPT5HO00267 1087 aaKnown RBP36.18■■■■□ 3.38
GPAA1-213ENST00000530258 TOPBP1Q92547 1522 aa35.99■■■■□ 3.35
GPAA1-213ENST00000530258 ABCC8Q09428 1581 aa35.97■■■■□ 3.35
GPAA1-213ENST00000530258 DNMBPQ6XZF7 1577 aa35.87■■■■□ 3.33
GPAA1-213ENST00000530258 IFT140Q96RY7 1462 aa35.86■■■■□ 3.33
GPAA1-213ENST00000530258 ZNF608Q9ULD9 1512 aaPredicted RBP35.76■■■■□ 3.31
GPAA1-213ENST00000530258 POLA1P09884 1462 aaPredicted RBP35.67■■■■□ 3.3
GPAA1-213ENST00000530258 TARBP1Q13395 1621 aaKnown RBP35.61■■■■□ 3.29
GPAA1-213ENST00000530258 CUX1P39880 1505 aa35.6■■■■□ 3.29
GPAA1-213ENST00000530258 OSCARQ8IYS5 282 aa35.58■■■■□ 3.29
GPAA1-213ENST00000530258 SOGA1O94964 1423 aa35.56■■■■□ 3.28
GPAA1-213ENST00000530258 RAD54L2Q9Y4B4 1467 aa35.55■■■■□ 3.28
GPAA1-213ENST00000530258 AQRO60306 1485 aaKnown RBP eCLIP35.54■■■■□ 3.283e-10■■■■■ 43.6
GPAA1-213ENST00000530258 FGD5Q6ZNL6 1462 aa35.52■■■■□ 3.28
GPAA1-213ENST00000530258 EIF4G3O43432 1585 aaKnown RBP35.48■■■■□ 3.27
GPAA1-213ENST00000530258 TDRD9Q8NDG6 1382 aaKnown RBP35.42■■■■□ 3.26
GPAA1-213ENST00000530258 WDR97A6NE52 1622 aa35.25■■■■□ 3.23
GPAA1-213ENST00000530258 WRNQ14191 1432 aaPredicted RBP eCLIP35.23■■■■□ 3.23
GPAA1-213ENST00000530258 ABCA10Q8WWZ4 1543 aa35.18■■■■□ 3.22
GPAA1-213ENST00000530258 TOP2BQ02880 1626 aa35.15■■■■□ 3.22
GPAA1-213ENST00000530258 GRIN2BQ13224 1484 aa35.15■■■■□ 3.22
GPAA1-213ENST00000530258 FBLN2P98095 1184 aa35.14■■■■□ 3.22
GPAA1-213ENST00000530258 SYNJ1O43426 1573 aa35.13■■■■□ 3.21
GPAA1-213ENST00000530258 SNAPC4Q5SXM2 1469 aa35.12■■■■□ 3.21
GPAA1-213ENST00000530258 BIVM-ERCC5R4GMW8 1640 aa35.12■■■■□ 3.21
GPAA1-213ENST00000530258 GAPVD1Q14C86 1478 aa35.1■■■■□ 3.21
GPAA1-213ENST00000530258 MAGI1Q96QZ7 1491 aaPredicted RBP35.07■■■■□ 3.2
GPAA1-213ENST00000530258 CHD1O14646 1710 aa35.05■■■■□ 3.2
GPAA1-213ENST00000530258 TRIM41Q8WV44 630 aa35.04■■■■□ 3.2
GPAA1-213ENST00000530258 CHMP7Q8WUX9 453 aaPredicted RBP35.02■■■■□ 3.2
GPAA1-213ENST00000530258 ABCA5Q8WWZ7 1642 aa35■■■■□ 3.19
GPAA1-213ENST00000530258 SYNJ2O15056 1496 aa34.96■■■■□ 3.19
GPAA1-213ENST00000530258 RIMBP3CA6NJZ7 1639 aa34.91■■■■□ 3.18
GPAA1-213ENST00000530258 RIMBP3BA6NNM3 1639 aa34.91■■■■□ 3.18
GPAA1-213ENST00000530258 RIMBP3Q9UFD9 1639 aa34.91■■■■□ 3.18
GPAA1-213ENST00000530258 ARHGEF11O15085 1522 aa34.9■■■■□ 3.18
GPAA1-213ENST00000530258 PBRM1Q86U86 1689 aa34.89■■■■□ 3.18
GPAA1-213ENST00000530258 CLASP1Q7Z460 1538 aa34.79■■■■□ 3.16
GPAA1-213ENST00000530258 ERICH3Q5RHP9 1530 aa34.72■■■■□ 3.15
GPAA1-213ENST00000530258 FHAD1B1AJZ9 1412 aa34.7■■■■□ 3.15
GPAA1-213ENST00000530258 CYB5RLQ6IPT4 315 aa34.69■■■■□ 3.14
GPAA1-213ENST00000530258 GRIN2AQ12879 1464 aa34.68■■■■□ 3.14
GPAA1-213ENST00000530258 ADAMTS12P58397 1594 aa34.67■■■■□ 3.14
GPAA1-213ENST00000530258 ARAP1Q96P48 1450 aa34.62■■■■□ 3.13
GPAA1-213ENST00000530258 NUP160Q12769 1436 aa34.59■■■■□ 3.13
GPAA1-213ENST00000530258 IGF1RP08069 1367 aa34.54■■■■□ 3.12
GPAA1-213ENST00000530258 KIF27Q86VH2 1401 aa34.53■■■■□ 3.12
GPAA1-213ENST00000530258 CEP170Q5SW79 1584 aa34.51■■■■□ 3.12
GPAA1-213ENST00000530258 ERCC6L2Q5T890 1561 aa34.31■■■■□ 3.08
GPAA1-213ENST00000530258 JPH4Q96JJ6 628 aa34.3■■■■□ 3.08
GPAA1-213ENST00000530258 SHROOM2Q13796 1616 aa34.3■■■■□ 3.08
GPAA1-213ENST00000530258 CARMIL1Q5VZK9 1371 aa34.27■■■■□ 3.08
GPAA1-213ENST00000530258 CUL7Q14999 1698 aa34.24■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms