RNA–Protein interactions for RNA: ENST00000530216.5

SHARPIN-204, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-204ENST00000530216 NISCHQ9Y2I1 1504 aa38.43■■■■□ 3.74
SHARPIN-204ENST00000530216 CCDC180Q9P1Z9 1646 aa34.26■■■■□ 3.07
SHARPIN-204ENST00000530216 ABCC9O60706 1549 aa33.82■■■■□ 3
SHARPIN-204ENST00000530216 DCAF8L2P0C7V8 631 aa32.45■■■□□ 2.79
SHARPIN-204ENST00000530216 RB1CC1Q8TDY2 1594 aa32.42■■■□□ 2.78
SHARPIN-204ENST00000530216 NACADO15069 1562 aa32.29■■■□□ 2.76
SHARPIN-204ENST00000530216 MYO15BQ96JP2 1530 aa31.96■■■□□ 2.71
SHARPIN-204ENST00000530216 ZCCHC6Q5VYS8 1495 aaKnown RBP31.91■■■□□ 2.7
SHARPIN-204ENST00000530216 DCAF1Q9Y4B6 1507 aa31.74■■■□□ 2.67
SHARPIN-204ENST00000530216 UNC13AQ9UPW8 1703 aa31.62■■■□□ 2.65
SHARPIN-204ENST00000530216 PABPN1Q86U42 306 aaKnown RBP eCLIP31.6■■■□□ 2.65
SHARPIN-204ENST00000530216 BICRAQ9NZM4 1560 aa31.34■■■□□ 2.61
SHARPIN-204ENST00000530216 SCRIBQ14160 1630 aa31.29■■■□□ 2.6
SHARPIN-204ENST00000530216 DNAJC5BQ9UF47 199 aa31.21■■■□□ 2.59
SHARPIN-204ENST00000530216 SHROOM4Q9ULL8 1493 aa31.02■■■□□ 2.56
SHARPIN-204ENST00000530216 EIF4G1Q04637 1599 aaKnown RBP30.6■■■□□ 2.49
SHARPIN-204ENST00000530216 CC2D2AQ9P2K1 1620 aa30.55■■■□□ 2.48
SHARPIN-204ENST00000530216 CECR2Q9BXF3 1484 aa30.41■■■□□ 2.46
SHARPIN-204ENST00000530216 SMARCA4P51532 1647 aa29.86■■■□□ 2.37
SHARPIN-204ENST00000530216 BAZ1AQ9NRL2 1556 aaPredicted RBP29.83■■■□□ 2.37
SHARPIN-204ENST00000530216 NCAPD3P42695 1498 aa29.78■■■□□ 2.36
SHARPIN-204ENST00000530216 ATAD2BQ9ULI0 1458 aa29.76■■■□□ 2.35
SHARPIN-204ENST00000530216 SMARCA2P51531 1590 aa29.76■■■□□ 2.35
SHARPIN-204ENST00000530216 HMGXB3Q12766 1538 aa29.6■■■□□ 2.33
SHARPIN-204ENST00000530216 MROH2BQ7Z745 1585 aa29.6■■■□□ 2.33
SHARPIN-204ENST00000530216 BAZ1BQ9UIG0 1483 aaKnown RBP29.56■■■□□ 2.32
SHARPIN-204ENST00000530216 PEG3Q9GZU2 1588 aa29.52■■■□□ 2.32
SHARPIN-204ENST00000530216 WIZO95785 1651 aa29.29■■■□□ 2.28
SHARPIN-204ENST00000530216 ERCC6Q03468 1493 aa29.24■■■□□ 2.27
SHARPIN-204ENST00000530216 RSF1Q96T23 1441 aaPredicted RBP29.18■■■□□ 2.26
SHARPIN-204ENST00000530216 NESP48681 1621 aa29.15■■■□□ 2.26
SHARPIN-204ENST00000530216 LAMC3Q9Y6N6 1575 aa29.07■■■□□ 2.24
SHARPIN-204ENST00000530216 TOP2AP11388 1531 aaKnown RBP28.95■■■□□ 2.23
SHARPIN-204ENST00000530216 CADPSQ9ULU8 1353 aa28.94■■■□□ 2.22
SHARPIN-204ENST00000530216 PDS5BQ9NTI5 1447 aa28.94■■■□□ 2.22
SHARPIN-204ENST00000530216 CUX2O14529 1486 aa28.92■■■□□ 2.22
SHARPIN-204ENST00000530216 KIF21AQ7Z4S6 1674 aa28.8■■■□□ 2.2
SHARPIN-204ENST00000530216 THOC2Q8NI27 1593 aaKnown RBP28.71■■■□□ 2.19
SHARPIN-204ENST00000530216 CFTRP13569 1480 aa28.67■■■□□ 2.18
SHARPIN-204ENST00000530216 CCDC88BA6NC98 1476 aa28.64■■■□□ 2.17
SHARPIN-204ENST00000530216 CEP164Q9UPV0 1460 aa28.62■■■□□ 2.17
SHARPIN-204ENST00000530216 FANCD2Q9BXW9 1451 aa28.61■■■□□ 2.17
SHARPIN-204ENST00000530216 MRC2Q9UBG0 1479 aa28.59■■■□□ 2.17
SHARPIN-204ENST00000530216 WDR62O43379 1518 aa28.46■■■□□ 2.15
SHARPIN-204ENST00000530216 PRDM2Q13029 1718 aa28.46■■■□□ 2.15
SHARPIN-204ENST00000530216 SUPT5HO00267 1087 aaKnown RBP28.44■■■□□ 2.14
SHARPIN-204ENST00000530216 DNAJC5Q9H3Z4 198 aa28.37■■■□□ 2.13
SHARPIN-204ENST00000530216 URB2Q14146 1524 aaKnown RBP28.29■■■□□ 2.12
SHARPIN-204ENST00000530216 ABCC8Q09428 1581 aa28.16■■■□□ 2.1
SHARPIN-204ENST00000530216 TOPBP1Q92547 1522 aa28.1■■■□□ 2.09
SHARPIN-204ENST00000530216 DNMBPQ6XZF7 1577 aa28.06■■■□□ 2.08
SHARPIN-204ENST00000530216 IFT140Q96RY7 1462 aa28.02■■■□□ 2.08
SHARPIN-204ENST00000530216 ZNF608Q9ULD9 1512 aaPredicted RBP27.87■■■□□ 2.05
SHARPIN-204ENST00000530216 POLA1P09884 1462 aaPredicted RBP27.83■■■□□ 2.05
SHARPIN-204ENST00000530216 SOGA1O94964 1423 aa27.8■■■□□ 2.04
SHARPIN-204ENST00000530216 OSCARQ8IYS5 282 aa27.79■■■□□ 2.04
SHARPIN-204ENST00000530216 CUX1P39880 1505 aa27.78■■■□□ 2.04
SHARPIN-204ENST00000530216 TARBP1Q13395 1621 aaKnown RBP27.78■■■□□ 2.04
SHARPIN-204ENST00000530216 EIF4G3O43432 1585 aaKnown RBP27.76■■■□□ 2.03
SHARPIN-204ENST00000530216 FGD5Q6ZNL6 1462 aa27.76■■■□□ 2.03
SHARPIN-204ENST00000530216 RAD54L2Q9Y4B4 1467 aa27.75■■■□□ 2.03
SHARPIN-204ENST00000530216 AQRO60306 1485 aaKnown RBP eCLIP27.73■■■□□ 2.031e-8■□□□□ 10.7
SHARPIN-204ENST00000530216 TDRD9Q8NDG6 1382 aaKnown RBP27.66■■■□□ 2.02
SHARPIN-204ENST00000530216 FBLN2P98095 1184 aa27.59■■■□□ 2.01
SHARPIN-204ENST00000530216 WRNQ14191 1432 aaPredicted RBP eCLIP27.58■■■□□ 2
SHARPIN-204ENST00000530216 WDR97A6NE52 1622 aa27.57■■■□□ 2
SHARPIN-204ENST00000530216 TOP2BQ02880 1626 aa27.49■■□□□ 1.99
SHARPIN-204ENST00000530216 BIVM-ERCC5R4GMW8 1640 aa27.48■■□□□ 1.99
SHARPIN-204ENST00000530216 CHD1O14646 1710 aa27.47■■□□□ 1.99
SHARPIN-204ENST00000530216 GRIN2BQ13224 1484 aa27.47■■□□□ 1.99
SHARPIN-204ENST00000530216 SYNJ1O43426 1573 aa27.46■■□□□ 1.99
SHARPIN-204ENST00000530216 ABCA10Q8WWZ4 1543 aa27.46■■□□□ 1.99
SHARPIN-204ENST00000530216 SNAPC4Q5SXM2 1469 aa27.45■■□□□ 1.99
SHARPIN-204ENST00000530216 GAPVD1Q14C86 1478 aa27.44■■□□□ 1.98
SHARPIN-204ENST00000530216 CHMP7Q8WUX9 453 aaPredicted RBP27.44■■□□□ 1.98
SHARPIN-204ENST00000530216 TRIM41Q8WV44 630 aa27.44■■□□□ 1.98
SHARPIN-204ENST00000530216 MAGI1Q96QZ7 1491 aaPredicted RBP27.41■■□□□ 1.98
SHARPIN-204ENST00000530216 PBRM1Q86U86 1689 aa27.38■■□□□ 1.97
SHARPIN-204ENST00000530216 ABCA5Q8WWZ7 1642 aa27.34■■□□□ 1.97
SHARPIN-204ENST00000530216 SYNJ2O15056 1496 aa27.32■■□□□ 1.96
SHARPIN-204ENST00000530216 RIMBP3CA6NJZ7 1639 aa27.27■■□□□ 1.96
SHARPIN-204ENST00000530216 RIMBP3BA6NNM3 1639 aa27.27■■□□□ 1.96
SHARPIN-204ENST00000530216 RIMBP3Q9UFD9 1639 aa27.27■■□□□ 1.96
SHARPIN-204ENST00000530216 ARHGEF11O15085 1522 aa27.23■■□□□ 1.95
SHARPIN-204ENST00000530216 ERICH3Q5RHP9 1530 aa27.14■■□□□ 1.94
SHARPIN-204ENST00000530216 CYB5RLQ6IPT4 315 aa27.12■■□□□ 1.93
SHARPIN-204ENST00000530216 CLASP1Q7Z460 1538 aa27.11■■□□□ 1.93
SHARPIN-204ENST00000530216 ADAMTS12P58397 1594 aa27.11■■□□□ 1.93
SHARPIN-204ENST00000530216 FHAD1B1AJZ9 1412 aa27.11■■□□□ 1.93
SHARPIN-204ENST00000530216 GRIN2AQ12879 1464 aa27.1■■□□□ 1.93
SHARPIN-204ENST00000530216 KIF27Q86VH2 1401 aa27.05■■□□□ 1.92
SHARPIN-204ENST00000530216 ARAP1Q96P48 1450 aa26.97■■□□□ 1.91
SHARPIN-204ENST00000530216 CEP170Q5SW79 1584 aa26.94■■□□□ 1.9
SHARPIN-204ENST00000530216 NUP160Q12769 1436 aa26.94■■□□□ 1.9
SHARPIN-204ENST00000530216 IGF1RP08069 1367 aa26.92■■□□□ 1.9
SHARPIN-204ENST00000530216 CUL7Q14999 1698 aa26.87■■□□□ 1.89
SHARPIN-204ENST00000530216 JPH4Q96JJ6 628 aa26.79■■□□□ 1.88
SHARPIN-204ENST00000530216 CARMIL1Q5VZK9 1371 aa26.79■■□□□ 1.88
SHARPIN-204ENST00000530216 SHROOM2Q13796 1616 aa26.76■■□□□ 1.87
SHARPIN-204ENST00000530216 ERCC6L2Q5T890 1561 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms