RNA–Protein interactions for RNA: ENST00000530185.1

IFT46-206, Transcript of intraflagellar transport 46, humanhuman

TSL 3

Gene IFT46, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46-206ENST00000530185 NISCHQ9Y2I1 1504 aa26.97■■□□□ 1.91
IFT46-206ENST00000530185 ABCC9O60706 1549 aa24.91■■□□□ 1.58
IFT46-206ENST00000530185 CCDC180Q9P1Z9 1646 aa24.46■■□□□ 1.51
IFT46-206ENST00000530185 DNAJC5BQ9UF47 199 aa23.78■■□□□ 1.4
IFT46-206ENST00000530185 RB1CC1Q8TDY2 1594 aa23.52■■□□□ 1.36
IFT46-206ENST00000530185 NACADO15069 1562 aa23.22■■□□□ 1.31
IFT46-206ENST00000530185 PABPN1Q86U42 306 aaKnown RBP eCLIP23.13■■□□□ 1.29
IFT46-206ENST00000530185 DCAF8L2P0C7V8 631 aa23.09■■□□□ 1.29
IFT46-206ENST00000530185 UNC13AQ9UPW8 1703 aa23.07■■□□□ 1.28
IFT46-206ENST00000530185 BICRAQ9NZM4 1560 aa22.81■■□□□ 1.24
IFT46-206ENST00000530185 MYO15BQ96JP2 1530 aa22.68■■□□□ 1.22
IFT46-206ENST00000530185 CC2D2AQ9P2K1 1620 aa22.49■■□□□ 1.19
IFT46-206ENST00000530185 CECR2Q9BXF3 1484 aa22.48■■□□□ 1.19
IFT46-206ENST00000530185 SHROOM4Q9ULL8 1493 aa22.41■■□□□ 1.18
IFT46-206ENST00000530185 EIF4G1Q04637 1599 aaKnown RBP22.31■■□□□ 1.16
IFT46-206ENST00000530185 SCRIBQ14160 1630 aa22.25■■□□□ 1.15
IFT46-206ENST00000530185 ZCCHC6Q5VYS8 1495 aaKnown RBP22.22■■□□□ 1.15
IFT46-206ENST00000530185 DCAF1Q9Y4B6 1507 aa22.22■■□□□ 1.15
IFT46-206ENST00000530185 DNAJC5Q9H3Z4 198 aa22.21■■□□□ 1.15
IFT46-206ENST00000530185 CUX2O14529 1486 aa21.64■■□□□ 1.06
IFT46-206ENST00000530185 ERCC6Q03468 1493 aa21.57■■□□□ 1.04
IFT46-206ENST00000530185 NCAPD3P42695 1498 aa21.41■■□□□ 1.02
IFT46-206ENST00000530185 ATAD2BQ9ULI0 1458 aa21.27■■□□□ 1
IFT46-206ENST00000530185 NESP48681 1621 aa21.26■□□□□ 0.99
IFT46-206ENST00000530185 SMARCA2P51531 1590 aa21.23■□□□□ 0.99
IFT46-206ENST00000530185 HMGXB3Q12766 1538 aa21.21■□□□□ 0.99
IFT46-206ENST00000530185 SMARCA4P51532 1647 aa21.17■□□□□ 0.98
IFT46-206ENST00000530185 THOC2Q8NI27 1593 aaKnown RBP21.13■□□□□ 0.97
IFT46-206ENST00000530185 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
IFT46-206ENST00000530185 BAZ1BQ9UIG0 1483 aaKnown RBP21.07■□□□□ 0.96
IFT46-206ENST00000530185 LAMC3Q9Y6N6 1575 aa21.05■□□□□ 0.96
IFT46-206ENST00000530185 KIF21AQ7Z4S6 1674 aa21.03■□□□□ 0.96
IFT46-206ENST00000530185 BAZ1AQ9NRL2 1556 aaPredicted RBP20.98■□□□□ 0.95
IFT46-206ENST00000530185 PDS5BQ9NTI5 1447 aa20.94■□□□□ 0.94
IFT46-206ENST00000530185 PEG3Q9GZU2 1588 aa20.93■□□□□ 0.94
IFT46-206ENST00000530185 MROH2BQ7Z745 1585 aa20.78■□□□□ 0.92
IFT46-206ENST00000530185 MRC2Q9UBG0 1479 aa20.76■□□□□ 0.91
IFT46-206ENST00000530185 CADPSQ9ULU8 1353 aa20.74■□□□□ 0.91
IFT46-206ENST00000530185 WDR62O43379 1518 aa20.73■□□□□ 0.91
IFT46-206ENST00000530185 OSCARQ8IYS5 282 aa20.63■□□□□ 0.89
IFT46-206ENST00000530185 CEP164Q9UPV0 1460 aa20.6■□□□□ 0.89
IFT46-206ENST00000530185 WIZO95785 1651 aa20.57■□□□□ 0.88
IFT46-206ENST00000530185 FANCD2Q9BXW9 1451 aa20.52■□□□□ 0.88
IFT46-206ENST00000530185 RIMBP3CA6NJZ7 1639 aa20.41■□□□□ 0.86
IFT46-206ENST00000530185 RIMBP3BA6NNM3 1639 aa20.41■□□□□ 0.86
IFT46-206ENST00000530185 RIMBP3Q9UFD9 1639 aa20.41■□□□□ 0.86
IFT46-206ENST00000530185 CFTRP13569 1480 aa20.4■□□□□ 0.86
IFT46-206ENST00000530185 URB2Q14146 1524 aaKnown RBP20.37■□□□□ 0.85
IFT46-206ENST00000530185 PRDM2Q13029 1718 aa20.28■□□□□ 0.84
IFT46-206ENST00000530185 ARHGEF11O15085 1522 aa20.26■□□□□ 0.83
IFT46-206ENST00000530185 TOP2AP11388 1531 aaKnown RBP20.22■□□□□ 0.83
IFT46-206ENST00000530185 ZNF608Q9ULD9 1512 aaPredicted RBP20.2■□□□□ 0.82
IFT46-206ENST00000530185 CYB5RLQ6IPT4 315 aa20.19■□□□□ 0.82
IFT46-206ENST00000530185 IFT140Q96RY7 1462 aa20.18■□□□□ 0.82
IFT46-206ENST00000530185 TRHP20396 242 aaPredicted RBP20.16■□□□□ 0.82
IFT46-206ENST00000530185 RSF1Q96T23 1441 aaPredicted RBP20.16■□□□□ 0.82
IFT46-206ENST00000530185 CHD1O14646 1710 aa20.1■□□□□ 0.81
IFT46-206ENST00000530185 EIF4G3O43432 1585 aaKnown RBP20.09■□□□□ 0.81
IFT46-206ENST00000530185 TOPBP1Q92547 1522 aa20.08■□□□□ 0.81
IFT46-206ENST00000530185 ABCC8Q09428 1581 aa20.04■□□□□ 0.8
IFT46-206ENST00000530185 FBLN2P98095 1184 aa20.01■□□□□ 0.79
IFT46-206ENST00000530185 CCDC88BA6NC98 1476 aa20■□□□□ 0.79
IFT46-206ENST00000530185 ARAP1Q96P48 1450 aa20■□□□□ 0.79
IFT46-206ENST00000530185 AQRO60306 1485 aaKnown RBP eCLIP19.99■□□□□ 0.79
IFT46-206ENST00000530185 DNMBPQ6XZF7 1577 aa19.97■□□□□ 0.79
IFT46-206ENST00000530185 TARBP1Q13395 1621 aaKnown RBP19.95■□□□□ 0.78
IFT46-206ENST00000530185 AEBP2Q6ZN18 517 aaPredicted RBP19.94■□□□□ 0.78
IFT46-206ENST00000530185 POLA1P09884 1462 aaPredicted RBP19.83■□□□□ 0.76
IFT46-206ENST00000530185 RAD54L2Q9Y4B4 1467 aa19.79■□□□□ 0.76
IFT46-206ENST00000530185 TDRD9Q8NDG6 1382 aaKnown RBP19.78■□□□□ 0.76
IFT46-206ENST00000530185 SOGA1O94964 1423 aa19.76■□□□□ 0.75
IFT46-206ENST00000530185 CLASP1Q7Z460 1538 aa19.76■□□□□ 0.75
IFT46-206ENST00000530185 CHMP7Q8WUX9 453 aaPredicted RBP19.76■□□□□ 0.75
IFT46-206ENST00000530185 SYNJ1O43426 1573 aa19.75■□□□□ 0.75
IFT46-206ENST00000530185 SNAPC4Q5SXM2 1469 aa19.75■□□□□ 0.75
IFT46-206ENST00000530185 WDR97A6NE52 1622 aa19.71■□□□□ 0.75
IFT46-206ENST00000530185 MAGI1Q96QZ7 1491 aaPredicted RBP19.68■□□□□ 0.74
IFT46-206ENST00000530185 FGD5Q6ZNL6 1462 aa19.66■□□□□ 0.74
IFT46-206ENST00000530185 GRIN2BQ13224 1484 aa19.63■□□□□ 0.73
IFT46-206ENST00000530185 SYNJ2O15056 1496 aa19.62■□□□□ 0.73
IFT46-206ENST00000530185 GAPVD1Q14C86 1478 aa19.61■□□□□ 0.73
IFT46-206ENST00000530185 PBRM1Q86U86 1689 aa19.59■□□□□ 0.73
IFT46-206ENST00000530185 CUX1P39880 1505 aa19.55■□□□□ 0.72
IFT46-206ENST00000530185 ERCC6L2Q5T890 1561 aa19.44■□□□□ 0.7
IFT46-206ENST00000530185 ABCA5Q8WWZ7 1642 aa19.42■□□□□ 0.7
IFT46-206ENST00000530185 KIF13AQ9H1H9 1805 aa19.4■□□□□ 0.7
IFT46-206ENST00000530185 GRIN2AQ12879 1464 aa19.38■□□□□ 0.69
IFT46-206ENST00000530185 ABCA10Q8WWZ4 1543 aa19.38■□□□□ 0.69
IFT46-206ENST00000530185 CEP170Q5SW79 1584 aa19.37■□□□□ 0.69
IFT46-206ENST00000530185 SHROOM2Q13796 1616 aa19.32■□□□□ 0.68
IFT46-206ENST00000530185 ADAMTS12P58397 1594 aa19.31■□□□□ 0.68
IFT46-206ENST00000530185 NUP160Q12769 1436 aa19.3■□□□□ 0.68
IFT46-206ENST00000530185 WRNQ14191 1432 aaPredicted RBP eCLIP19.24■□□□□ 0.67
IFT46-206ENST00000530185 FHAD1B1AJZ9 1412 aa19.22■□□□□ 0.67
IFT46-206ENST00000530185 FAM69CQ0P6D2 419 aa19.2■□□□□ 0.66
IFT46-206ENST00000530185 PRG4Q92954 1404 aaPredicted RBP19.19■□□□□ 0.66
IFT46-206ENST00000530185 NPM1P06748 294 aaKnown RBP eCLIP19.19■□□□□ 0.66
IFT46-206ENST00000530185 JPH4Q96JJ6 628 aa19.16■□□□□ 0.66
IFT46-206ENST00000530185 ABCC10Q5T3U5 1492 aa19.15■□□□□ 0.66
IFT46-206ENST00000530185 ERICH3Q5RHP9 1530 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms