RNA–Protein interactions for RNA: ENST00000530180.1

SAAL1-205, Transcript of serum amyloid A like 1, humanhuman

TSL 5

Gene SAAL1, Length 657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAAL1-205ENST00000530180 NISCHQ9Y2I1 1504 aa33.73■■■□□ 2.99
SAAL1-205ENST00000530180 CCDC180Q9P1Z9 1646 aa30.28■■■□□ 2.44
SAAL1-205ENST00000530180 ABCC9O60706 1549 aa30.16■■■□□ 2.42
SAAL1-205ENST00000530180 RB1CC1Q8TDY2 1594 aa28.73■■■□□ 2.19
SAAL1-205ENST00000530180 NACADO15069 1562 aa28.55■■■□□ 2.16
SAAL1-205ENST00000530180 DNAJC5BQ9UF47 199 aa28.27■■■□□ 2.12
SAAL1-205ENST00000530180 DCAF8L2P0C7V8 631 aa28.24■■■□□ 2.11
SAAL1-205ENST00000530180 UNC13AQ9UPW8 1703 aa28.22■■■□□ 2.11
SAAL1-205ENST00000530180 MYO15BQ96JP2 1530 aa28.2■■■□□ 2.1
SAAL1-205ENST00000530180 PABPN1Q86U42 306 aaKnown RBP eCLIP28.03■■■□□ 2.08
SAAL1-205ENST00000530180 BICRAQ9NZM4 1560 aa27.99■■■□□ 2.07
SAAL1-205ENST00000530180 ZCCHC6Q5VYS8 1495 aaKnown RBP27.99■■■□□ 2.07
SAAL1-205ENST00000530180 DCAF1Q9Y4B6 1507 aa27.87■■■□□ 2.05
SAAL1-205ENST00000530180 SCRIBQ14160 1630 aa27.57■■■□□ 2
SAAL1-205ENST00000530180 SHROOM4Q9ULL8 1493 aa27.53■■■□□ 2
SAAL1-205ENST00000530180 CC2D2AQ9P2K1 1620 aa27.29■■□□□ 1.96
SAAL1-205ENST00000530180 EIF4G1Q04637 1599 aaKnown RBP27.24■■□□□ 1.95
SAAL1-205ENST00000530180 CECR2Q9BXF3 1484 aa27.14■■□□□ 1.94
SAAL1-205ENST00000530180 NCAPD3P42695 1498 aa26.36■■□□□ 1.81
SAAL1-205ENST00000530180 SMARCA4P51532 1647 aa26.32■■□□□ 1.8
SAAL1-205ENST00000530180 ATAD2BQ9ULI0 1458 aa26.3■■□□□ 1.8
SAAL1-205ENST00000530180 SMARCA2P51531 1590 aa26.2■■□□□ 1.79
SAAL1-205ENST00000530180 HMGXB3Q12766 1538 aa26.2■■□□□ 1.79
SAAL1-205ENST00000530180 BAZ1AQ9NRL2 1556 aaPredicted RBP26.15■■□□□ 1.78
SAAL1-205ENST00000530180 PEG3Q9GZU2 1588 aa26.08■■□□□ 1.77
SAAL1-205ENST00000530180 MROH2BQ7Z745 1585 aa26.01■■□□□ 1.75
SAAL1-205ENST00000530180 BAZ1BQ9UIG0 1483 aaKnown RBP26.01■■□□□ 1.75
SAAL1-205ENST00000530180 NESP48681 1621 aa25.96■■□□□ 1.75
SAAL1-205ENST00000530180 ERCC6Q03468 1493 aa25.96■■□□□ 1.75
SAAL1-205ENST00000530180 CUX2O14529 1486 aa25.95■■□□□ 1.74
SAAL1-205ENST00000530180 DNAJC5Q9H3Z4 198 aa25.84■■□□□ 1.73
SAAL1-205ENST00000530180 LAMC3Q9Y6N6 1575 aa25.76■■□□□ 1.71
SAAL1-205ENST00000530180 THOC2Q8NI27 1593 aaKnown RBP25.73■■□□□ 1.71
SAAL1-205ENST00000530180 WIZO95785 1651 aa25.71■■□□□ 1.71
SAAL1-205ENST00000530180 KIF21AQ7Z4S6 1674 aa25.67■■□□□ 1.7
SAAL1-205ENST00000530180 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
SAAL1-205ENST00000530180 CADPSQ9ULU8 1353 aa25.52■■□□□ 1.68
SAAL1-205ENST00000530180 RSF1Q96T23 1441 aaPredicted RBP25.46■■□□□ 1.67
SAAL1-205ENST00000530180 MRC2Q9UBG0 1479 aa25.37■■□□□ 1.65
SAAL1-205ENST00000530180 TOP2AP11388 1531 aaKnown RBP25.37■■□□□ 1.65
SAAL1-205ENST00000530180 WDR62O43379 1518 aa25.36■■□□□ 1.65
SAAL1-205ENST00000530180 CFTRP13569 1480 aa25.28■■□□□ 1.64
SAAL1-205ENST00000530180 CEP164Q9UPV0 1460 aa25.27■■□□□ 1.64
SAAL1-205ENST00000530180 FANCD2Q9BXW9 1451 aa25.26■■□□□ 1.63
SAAL1-205ENST00000530180 PRDM2Q13029 1718 aa25.12■■□□□ 1.61
SAAL1-205ENST00000530180 URB2Q14146 1524 aaKnown RBP25.1■■□□□ 1.61
SAAL1-205ENST00000530180 CCDC88BA6NC98 1476 aa25.06■■□□□ 1.6
SAAL1-205ENST00000530180 TOPBP1Q92547 1522 aa24.81■■□□□ 1.56
SAAL1-205ENST00000530180 ZNF608Q9ULD9 1512 aaPredicted RBP24.77■■□□□ 1.56
SAAL1-205ENST00000530180 IFT140Q96RY7 1462 aa24.76■■□□□ 1.55
SAAL1-205ENST00000530180 DNMBPQ6XZF7 1577 aa24.73■■□□□ 1.55
SAAL1-205ENST00000530180 ABCC8Q09428 1581 aa24.68■■□□□ 1.54
SAAL1-205ENST00000530180 OSCARQ8IYS5 282 aa24.68■■□□□ 1.54
SAAL1-205ENST00000530180 TRIM41Q8WV44 630 aa24.67■■□□□ 1.54
SAAL1-205ENST00000530180 EIF4G3O43432 1585 aaKnown RBP24.66■■□□□ 1.54
SAAL1-205ENST00000530180 TARBP1Q13395 1621 aaKnown RBP24.64■■□□□ 1.54
SAAL1-205ENST00000530180 POLA1P09884 1462 aaPredicted RBP24.57■■□□□ 1.52
SAAL1-205ENST00000530180 AQRO60306 1485 aaKnown RBP eCLIP24.51■■□□□ 1.514e-8■■□□□ 13.7
SAAL1-205ENST00000530180 RIMBP3CA6NJZ7 1639 aa24.51■■□□□ 1.51
SAAL1-205ENST00000530180 RIMBP3BA6NNM3 1639 aa24.51■■□□□ 1.51
SAAL1-205ENST00000530180 RIMBP3Q9UFD9 1639 aa24.51■■□□□ 1.51
SAAL1-205ENST00000530180 CHD1O14646 1710 aa24.48■■□□□ 1.51
SAAL1-205ENST00000530180 RAD54L2Q9Y4B4 1467 aa24.46■■□□□ 1.51
SAAL1-205ENST00000530180 CUX1P39880 1505 aa24.44■■□□□ 1.5
SAAL1-205ENST00000530180 ARHGEF11O15085 1522 aa24.41■■□□□ 1.5
SAAL1-205ENST00000530180 FGD5Q6ZNL6 1462 aa24.41■■□□□ 1.5
SAAL1-205ENST00000530180 SOGA1O94964 1423 aa24.39■■□□□ 1.5
SAAL1-205ENST00000530180 TDRD9Q8NDG6 1382 aaKnown RBP24.34■■□□□ 1.49
SAAL1-205ENST00000530180 WDR97A6NE52 1622 aa24.34■■□□□ 1.49
SAAL1-205ENST00000530180 SNAPC4Q5SXM2 1469 aa24.27■■□□□ 1.48
SAAL1-205ENST00000530180 SUPT5HO00267 1087 aaKnown RBP24.24■■□□□ 1.47
SAAL1-205ENST00000530180 FBLN2P98095 1184 aa24.21■■□□□ 1.47
SAAL1-205ENST00000530180 MAGI1Q96QZ7 1491 aaPredicted RBP24.2■■□□□ 1.47
SAAL1-205ENST00000530180 CLASP1Q7Z460 1538 aa24.2■■□□□ 1.46
SAAL1-205ENST00000530180 ARAP1Q96P48 1450 aa24.19■■□□□ 1.46
SAAL1-205ENST00000530180 PBRM1Q86U86 1689 aa24.19■■□□□ 1.46
SAAL1-205ENST00000530180 GRIN2BQ13224 1484 aa24.19■■□□□ 1.46
SAAL1-205ENST00000530180 ABCA5Q8WWZ7 1642 aa24.16■■□□□ 1.46
SAAL1-205ENST00000530180 ABCA10Q8WWZ4 1543 aa24.15■■□□□ 1.46
SAAL1-205ENST00000530180 SYNJ2O15056 1496 aa24.12■■□□□ 1.45
SAAL1-205ENST00000530180 GAPVD1Q14C86 1478 aa24.12■■□□□ 1.45
SAAL1-205ENST00000530180 CYB5RLQ6IPT4 315 aa24.11■■□□□ 1.45
SAAL1-205ENST00000530180 SYNJ1O43426 1573 aa24.11■■□□□ 1.45
SAAL1-205ENST00000530180 BIVM-ERCC5R4GMW8 1640 aa24.08■■□□□ 1.45
SAAL1-205ENST00000530180 CHMP7Q8WUX9 453 aaPredicted RBP24.05■■□□□ 1.44
SAAL1-205ENST00000530180 TOP2BQ02880 1626 aa24.05■■□□□ 1.44
SAAL1-205ENST00000530180 WRNQ14191 1432 aaPredicted RBP eCLIP23.99■■□□□ 1.43
SAAL1-205ENST00000530180 ADAMTS12P58397 1594 aa23.95■■□□□ 1.43
SAAL1-205ENST00000530180 GRIN2AQ12879 1464 aa23.91■■□□□ 1.42
SAAL1-205ENST00000530180 CEP170Q5SW79 1584 aa23.87■■□□□ 1.41
SAAL1-205ENST00000530180 NUP160Q12769 1436 aa23.84■■□□□ 1.41
SAAL1-205ENST00000530180 ERCC6L2Q5T890 1561 aa23.84■■□□□ 1.41
SAAL1-205ENST00000530180 ERICH3Q5RHP9 1530 aa23.83■■□□□ 1.41
SAAL1-205ENST00000530180 FHAD1B1AJZ9 1412 aa23.8■■□□□ 1.4
SAAL1-205ENST00000530180 SHROOM2Q13796 1616 aa23.78■■□□□ 1.4
SAAL1-205ENST00000530180 TRHP20396 242 aaPredicted RBP23.77■■□□□ 1.4
SAAL1-205ENST00000530180 RUSC2Q8N2Y8 1516 aa23.63■■□□□ 1.37
SAAL1-205ENST00000530180 PRG4Q92954 1404 aaPredicted RBP23.55■■□□□ 1.36
SAAL1-205ENST00000530180 IGF1RP08069 1367 aa23.51■■□□□ 1.35
SAAL1-205ENST00000530180 CUL7Q14999 1698 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms