RNA–Protein interactions for RNA: ENST00000530143.1

FAM220A-203, Transcript of family with sequence similarity 220 member A, humanhuman

TSL 4

Gene FAM220A, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM220A-203ENST00000530143 NISCHQ9Y2I1 1504 aa36.9■■■■□ 3.5
FAM220A-203ENST00000530143 ABCC9O60706 1549 aa32.95■■■□□ 2.87
FAM220A-203ENST00000530143 CCDC180Q9P1Z9 1646 aa32.88■■■□□ 2.85
FAM220A-203ENST00000530143 RB1CC1Q8TDY2 1594 aa31.32■■■□□ 2.6
FAM220A-203ENST00000530143 DCAF8L2P0C7V8 631 aa31.28■■■□□ 2.6
FAM220A-203ENST00000530143 NACADO15069 1562 aa31.17■■■□□ 2.58
FAM220A-203ENST00000530143 DNAJC5BQ9UF47 199 aa30.9■■■□□ 2.54
FAM220A-203ENST00000530143 PABPN1Q86U42 306 aaKnown RBP eCLIP30.82■■■□□ 2.52
FAM220A-203ENST00000530143 MYO15BQ96JP2 1530 aa30.78■■■□□ 2.52
FAM220A-203ENST00000530143 ZCCHC6Q5VYS8 1495 aaKnown RBP30.58■■■□□ 2.49
FAM220A-203ENST00000530143 UNC13AQ9UPW8 1703 aa30.47■■■□□ 2.47
FAM220A-203ENST00000530143 DCAF1Q9Y4B6 1507 aa30.45■■■□□ 2.47
FAM220A-203ENST00000530143 BICRAQ9NZM4 1560 aa30.43■■■□□ 2.46
FAM220A-203ENST00000530143 SCRIBQ14160 1630 aa30.07■■■□□ 2.4
FAM220A-203ENST00000530143 SHROOM4Q9ULL8 1493 aa29.99■■■□□ 2.39
FAM220A-203ENST00000530143 CC2D2AQ9P2K1 1620 aa29.69■■■□□ 2.34
FAM220A-203ENST00000530143 EIF4G1Q04637 1599 aaKnown RBP29.68■■■□□ 2.34
FAM220A-203ENST00000530143 CECR2Q9BXF3 1484 aa29.66■■■□□ 2.34
FAM220A-203ENST00000530143 NCAPD3P42695 1498 aa28.85■■■□□ 2.21
FAM220A-203ENST00000530143 ATAD2BQ9ULI0 1458 aa28.78■■■□□ 2.2
FAM220A-203ENST00000530143 SMARCA4P51532 1647 aa28.69■■■□□ 2.18
FAM220A-203ENST00000530143 SMARCA2P51531 1590 aa28.62■■■□□ 2.17
FAM220A-203ENST00000530143 BAZ1AQ9NRL2 1556 aaPredicted RBP28.6■■■□□ 2.17
FAM220A-203ENST00000530143 HMGXB3Q12766 1538 aa28.54■■■□□ 2.16
FAM220A-203ENST00000530143 BAZ1BQ9UIG0 1483 aaKnown RBP28.48■■■□□ 2.15
FAM220A-203ENST00000530143 MROH2BQ7Z745 1585 aa28.45■■■□□ 2.15
FAM220A-203ENST00000530143 PEG3Q9GZU2 1588 aa28.41■■■□□ 2.14
FAM220A-203ENST00000530143 ERCC6Q03468 1493 aa28.41■■■□□ 2.14
FAM220A-203ENST00000530143 NESP48681 1621 aa28.34■■■□□ 2.13
FAM220A-203ENST00000530143 CUX2O14529 1486 aa28.27■■■□□ 2.12
FAM220A-203ENST00000530143 DNAJC5Q9H3Z4 198 aa28.24■■■□□ 2.11
FAM220A-203ENST00000530143 LAMC3Q9Y6N6 1575 aa28.07■■■□□ 2.08
FAM220A-203ENST00000530143 WIZO95785 1651 aa28.06■■■□□ 2.08
FAM220A-203ENST00000530143 PDS5BQ9NTI5 1447 aa28.01■■■□□ 2.08
FAM220A-203ENST00000530143 CADPSQ9ULU8 1353 aa28.01■■■□□ 2.07
FAM220A-203ENST00000530143 RSF1Q96T23 1441 aaPredicted RBP27.98■■■□□ 2.07
FAM220A-203ENST00000530143 THOC2Q8NI27 1593 aaKnown RBP27.9■■■□□ 2.06
FAM220A-203ENST00000530143 KIF21AQ7Z4S6 1674 aa27.82■■■□□ 2.04
FAM220A-203ENST00000530143 MRC2Q9UBG0 1479 aa27.72■■■□□ 2.03
FAM220A-203ENST00000530143 TOP2AP11388 1531 aaKnown RBP27.72■■■□□ 2.03
FAM220A-203ENST00000530143 CFTRP13569 1480 aa27.69■■■□□ 2.02
FAM220A-203ENST00000530143 FANCD2Q9BXW9 1451 aa27.65■■■□□ 2.02
FAM220A-203ENST00000530143 CEP164Q9UPV0 1460 aa27.64■■■□□ 2.01
FAM220A-203ENST00000530143 WDR62O43379 1518 aa27.61■■■□□ 2.01
FAM220A-203ENST00000530143 CCDC88BA6NC98 1476 aa27.5■■□□□ 1.99
FAM220A-203ENST00000530143 URB2Q14146 1524 aaKnown RBP27.4■■□□□ 1.98
FAM220A-203ENST00000530143 OSCARQ8IYS5 282 aa27.16■■□□□ 1.94
FAM220A-203ENST00000530143 PRDM2Q13029 1718 aa27.14■■□□□ 1.94
FAM220A-203ENST00000530143 TOPBP1Q92547 1522 aa27.12■■□□□ 1.93
FAM220A-203ENST00000530143 IFT140Q96RY7 1462 aa27.09■■□□□ 1.93
FAM220A-203ENST00000530143 TRIM41Q8WV44 630 aa27.08■■□□□ 1.93
FAM220A-203ENST00000530143 ZNF608Q9ULD9 1512 aaPredicted RBP27.07■■□□□ 1.92
FAM220A-203ENST00000530143 ABCC8Q09428 1581 aa27.06■■□□□ 1.92
FAM220A-203ENST00000530143 DNMBPQ6XZF7 1577 aa26.98■■□□□ 1.91
FAM220A-203ENST00000530143 SUPT5HO00267 1087 aaKnown RBP26.94■■□□□ 1.9
FAM220A-203ENST00000530143 AQRO60306 1485 aaKnown RBP eCLIP26.87■■□□□ 1.89
FAM220A-203ENST00000530143 POLA1P09884 1462 aaPredicted RBP26.86■■□□□ 1.89
FAM220A-203ENST00000530143 TARBP1Q13395 1621 aaKnown RBP26.82■■□□□ 1.88
FAM220A-203ENST00000530143 SOGA1O94964 1423 aa26.81■■□□□ 1.88
FAM220A-203ENST00000530143 RAD54L2Q9Y4B4 1467 aa26.81■■□□□ 1.88
FAM220A-203ENST00000530143 EIF4G3O43432 1585 aaKnown RBP26.8■■□□□ 1.88
FAM220A-203ENST00000530143 TDRD9Q8NDG6 1382 aaKnown RBP26.77■■□□□ 1.88
FAM220A-203ENST00000530143 FBLN2P98095 1184 aa26.73■■□□□ 1.87
FAM220A-203ENST00000530143 FGD5Q6ZNL6 1462 aa26.72■■□□□ 1.87
FAM220A-203ENST00000530143 CUX1P39880 1505 aa26.71■■□□□ 1.87
FAM220A-203ENST00000530143 RIMBP3CA6NJZ7 1639 aa26.6■■□□□ 1.85
FAM220A-203ENST00000530143 RIMBP3BA6NNM3 1639 aa26.6■■□□□ 1.85
FAM220A-203ENST00000530143 RIMBP3Q9UFD9 1639 aa26.6■■□□□ 1.85
FAM220A-203ENST00000530143 ARHGEF11O15085 1522 aa26.59■■□□□ 1.85
FAM220A-203ENST00000530143 CHMP7Q8WUX9 453 aaPredicted RBP26.54■■□□□ 1.84
FAM220A-203ENST00000530143 SNAPC4Q5SXM2 1469 aa26.54■■□□□ 1.84
FAM220A-203ENST00000530143 CYB5RLQ6IPT4 315 aa26.53■■□□□ 1.84
FAM220A-203ENST00000530143 CHD1O14646 1710 aa26.51■■□□□ 1.83
FAM220A-203ENST00000530143 GRIN2BQ13224 1484 aa26.5■■□□□ 1.83
FAM220A-203ENST00000530143 WDR97A6NE52 1622 aa26.49■■□□□ 1.83
FAM220A-203ENST00000530143 MAGI1Q96QZ7 1491 aaPredicted RBP26.45■■□□□ 1.82
FAM220A-203ENST00000530143 GAPVD1Q14C86 1478 aa26.44■■□□□ 1.82
FAM220A-203ENST00000530143 ABCA10Q8WWZ4 1543 aa26.41■■□□□ 1.82
FAM220A-203ENST00000530143 WRNQ14191 1432 aaPredicted RBP eCLIP26.39■■□□□ 1.82
FAM220A-203ENST00000530143 SYNJ2O15056 1496 aa26.39■■□□□ 1.82
FAM220A-203ENST00000530143 ARAP1Q96P48 1450 aa26.35■■□□□ 1.81
FAM220A-203ENST00000530143 CLASP1Q7Z460 1538 aa26.31■■□□□ 1.8
FAM220A-203ENST00000530143 SYNJ1O43426 1573 aa26.29■■□□□ 1.8
FAM220A-203ENST00000530143 ABCA5Q8WWZ7 1642 aa26.28■■□□□ 1.8
FAM220A-203ENST00000530143 TOP2BQ02880 1626 aa26.27■■□□□ 1.8
FAM220A-203ENST00000530143 PBRM1Q86U86 1689 aa26.23■■□□□ 1.79
FAM220A-203ENST00000530143 BIVM-ERCC5R4GMW8 1640 aa26.21■■□□□ 1.79
FAM220A-203ENST00000530143 TRHP20396 242 aaPredicted RBP26.18■■□□□ 1.78
FAM220A-203ENST00000530143 GRIN2AQ12879 1464 aa26.15■■□□□ 1.78
FAM220A-203ENST00000530143 FHAD1B1AJZ9 1412 aa26.12■■□□□ 1.77
FAM220A-203ENST00000530143 ADAMTS12P58397 1594 aa26.07■■□□□ 1.76
FAM220A-203ENST00000530143 NUP160Q12769 1436 aa26.07■■□□□ 1.76
FAM220A-203ENST00000530143 ERICH3Q5RHP9 1530 aa26.05■■□□□ 1.76
FAM220A-203ENST00000530143 CEP170Q5SW79 1584 aa26.01■■□□□ 1.75
FAM220A-203ENST00000530143 ERCC6L2Q5T890 1561 aa25.96■■□□□ 1.75
FAM220A-203ENST00000530143 JPH4Q96JJ6 628 aa25.91■■□□□ 1.74
FAM220A-203ENST00000530143 IGF1RP08069 1367 aa25.9■■□□□ 1.74
FAM220A-203ENST00000530143 KIF27Q86VH2 1401 aa25.86■■□□□ 1.73
FAM220A-203ENST00000530143 PRG4Q92954 1404 aaPredicted RBP25.85■■□□□ 1.73
FAM220A-203ENST00000530143 SHROOM2Q13796 1616 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms