RNA–Protein interactions for RNA: ENST00000530131.5

RDX-209, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 1,911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-209ENST00000530131 NISCHQ9Y2I1 1504 aa35.03■■■■□ 3.2
RDX-209ENST00000530131 CCDC180Q9P1Z9 1646 aa30.62■■■□□ 2.49
RDX-209ENST00000530131 ZCCHC6Q5VYS8 1495 aaKnown RBP29.43■■■□□ 2.3
RDX-209ENST00000530131 DCAF1Q9Y4B6 1507 aa28.99■■■□□ 2.23
RDX-209ENST00000530131 ABCC9O60706 1549 aa28.93■■■□□ 2.22
RDX-209ENST00000530131 DCAF8L2P0C7V8 631 aa28.76■■■□□ 2.19
RDX-209ENST00000530131 MYO15BQ96JP2 1530 aa28.68■■■□□ 2.18
RDX-209ENST00000530131 NACADO15069 1562 aa28.5■■■□□ 2.15
RDX-209ENST00000530131 SHROOM4Q9ULL8 1493 aa28.41■■■□□ 2.14
RDX-209ENST00000530131 RB1CC1Q8TDY2 1594 aa28.26■■■□□ 2.11
RDX-209ENST00000530131 SCRIBQ14160 1630 aa28.09■■■□□ 2.09
RDX-209ENST00000530131 UNC13AQ9UPW8 1703 aa27.77■■■□□ 2.04
RDX-209ENST00000530131 BICRAQ9NZM4 1560 aa27.47■■□□□ 1.99
RDX-209ENST00000530131 SUPT5HO00267 1087 aaKnown RBP27.26■■□□□ 1.95
RDX-209ENST00000530131 PABPN1Q86U42 306 aaKnown RBP eCLIP27.22■■□□□ 1.95
RDX-209ENST00000530131 CECR2Q9BXF3 1484 aa27.21■■□□□ 1.95
RDX-209ENST00000530131 RSF1Q96T23 1441 aaPredicted RBP27.12■■□□□ 1.93
RDX-209ENST00000530131 MROH2BQ7Z745 1585 aa27.06■■□□□ 1.92
RDX-209ENST00000530131 BAZ1AQ9NRL2 1556 aaPredicted RBP27.04■■□□□ 1.92
RDX-209ENST00000530131 SMARCA4P51532 1647 aa26.96■■□□□ 1.91
RDX-209ENST00000530131 WIZO95785 1651 aa26.83■■□□□ 1.89
RDX-209ENST00000530131 PEG3Q9GZU2 1588 aa26.66■■□□□ 1.86
RDX-209ENST00000530131 EIF4G1Q04637 1599 aaKnown RBP26.61■■□□□ 1.85
RDX-209ENST00000530131 TOP2AP11388 1531 aaKnown RBP26.56■■□□□ 1.84
RDX-209ENST00000530131 ATAD2BQ9ULI0 1458 aa26.51■■□□□ 1.83
RDX-209ENST00000530131 SMARCA2P51531 1590 aa26.49■■□□□ 1.83
RDX-209ENST00000530131 BAZ1BQ9UIG0 1483 aaKnown RBP26.33■■□□□ 1.81
RDX-209ENST00000530131 NCAPD3P42695 1498 aa26.3■■□□□ 1.8
RDX-209ENST00000530131 HMGXB3Q12766 1538 aa26.29■■□□□ 1.8
RDX-209ENST00000530131 CCDC88BA6NC98 1476 aa26.26■■□□□ 1.79
RDX-209ENST00000530131 CC2D2AQ9P2K1 1620 aa26.23■■□□□ 1.79
RDX-209ENST00000530131 CHIC1Q5VXU3 224 aa26.12■■□□□ 1.77
RDX-209ENST00000530131 CFTRP13569 1480 aa25.7■■□□□ 1.7
RDX-209ENST00000530131 ABCC8Q09428 1581 aa25.69■■□□□ 1.7
RDX-209ENST00000530131 TRIM41Q8WV44 630 aa25.64■■□□□ 1.69
RDX-209ENST00000530131 PRDM2Q13029 1718 aa25.62■■□□□ 1.69
RDX-209ENST00000530131 CADPSQ9ULU8 1353 aa25.59■■□□□ 1.69
RDX-209ENST00000530131 DNAJC5BQ9UF47 199 aa25.59■■□□□ 1.69
RDX-209ENST00000530131 WRNQ14191 1432 aaPredicted RBP eCLIP25.51■■□□□ 1.67
RDX-209ENST00000530131 SYNJ1O43426 1573 aa25.46■■□□□ 1.67
RDX-209ENST00000530131 LAMC3Q9Y6N6 1575 aa25.42■■□□□ 1.66
RDX-209ENST00000530131 NESP48681 1621 aa25.41■■□□□ 1.66
RDX-209ENST00000530131 TOP2BQ02880 1626 aa25.37■■□□□ 1.65
RDX-209ENST00000530131 BIVM-ERCC5R4GMW8 1640 aa25.36■■□□□ 1.65
RDX-209ENST00000530131 CUX1P39880 1505 aa25.31■■□□□ 1.64
RDX-209ENST00000530131 FANCD2Q9BXW9 1451 aa25.31■■□□□ 1.64
RDX-209ENST00000530131 PDS5BQ9NTI5 1447 aa25.17■■□□□ 1.62
RDX-209ENST00000530131 SOGA1O94964 1423 aa25.16■■□□□ 1.62
RDX-209ENST00000530131 CEP164Q9UPV0 1460 aa25.16■■□□□ 1.62
RDX-209ENST00000530131 KIF21AQ7Z4S6 1674 aa25.14■■□□□ 1.62
RDX-209ENST00000530131 FAM9AQ8IZU1 332 aaPredicted RBP25.14■■□□□ 1.62
RDX-209ENST00000530131 DNMBPQ6XZF7 1577 aa25.1■■□□□ 1.61
RDX-209ENST00000530131 EEA1Q15075 1411 aa25.1■■□□□ 1.61
RDX-209ENST00000530131 RUSC2Q8N2Y8 1516 aa25.09■■□□□ 1.61
RDX-209ENST00000530131 LOC105371045A0A1W2PR82 267 aa25.07■■□□□ 1.6
RDX-209ENST00000530131 TOPBP1Q92547 1522 aa25.05■■□□□ 1.6
RDX-209ENST00000530131 URB2Q14146 1524 aaKnown RBP25.04■■□□□ 1.6
RDX-209ENST00000530131 FGD5Q6ZNL6 1462 aa25.02■■□□□ 1.6
RDX-209ENST00000530131 CSRNP3Q8WYN3 585 aa24.92■■□□□ 1.58
RDX-209ENST00000530131 POLA1P09884 1462 aaPredicted RBP24.92■■□□□ 1.58
RDX-209ENST00000530131 MRC2Q9UBG0 1479 aa24.89■■□□□ 1.58
RDX-209ENST00000530131 KIF27Q86VH2 1401 aa24.85■■□□□ 1.57
RDX-209ENST00000530131 KIF21BO75037 1637 aa24.84■■□□□ 1.57
RDX-209ENST00000530131 ABCA10Q8WWZ4 1543 aa24.82■■□□□ 1.56
RDX-209ENST00000530131 CUX2O14529 1486 aa24.82■■□□□ 1.56
RDX-209ENST00000530131 RAD54L2Q9Y4B4 1467 aa24.82■■□□□ 1.56
RDX-209ENST00000530131 WDR97A6NE52 1622 aa24.8■■□□□ 1.56
RDX-209ENST00000530131 WDR62O43379 1518 aa24.8■■□□□ 1.56
RDX-209ENST00000530131 ERCC6Q03468 1493 aa24.78■■□□□ 1.56
RDX-209ENST00000530131 THOC2Q8NI27 1593 aaKnown RBP24.77■■□□□ 1.56
RDX-209ENST00000530131 EHMT2Q96KQ7 1210 aa24.76■■□□□ 1.55
RDX-209ENST00000530131 GOLGA3Q08378 1498 aa24.75■■□□□ 1.55
RDX-209ENST00000530131 PRXQ9BXM0 1461 aa24.72■■□□□ 1.55
RDX-209ENST00000530131 TARBP1Q13395 1621 aaKnown RBP24.72■■□□□ 1.55
RDX-209ENST00000530131 ERICH3Q5RHP9 1530 aa24.68■■□□□ 1.54
RDX-209ENST00000530131 RAPGEF2Q9Y4G8 1499 aa24.67■■□□□ 1.54
RDX-209ENST00000530131 IGF1RP08069 1367 aa24.66■■□□□ 1.54
RDX-209ENST00000530131 ABCA5Q8WWZ7 1642 aa24.65■■□□□ 1.54
RDX-209ENST00000530131 TNIKQ9UKE5 1360 aa24.65■■□□□ 1.54
RDX-209ENST00000530131 IFT140Q96RY7 1462 aa24.57■■□□□ 1.52
RDX-209ENST00000530131 TDRD9Q8NDG6 1382 aaKnown RBP24.55■■□□□ 1.52
RDX-209ENST00000530131 UBTFP17480 764 aaKnown RBP24.55■■□□□ 1.52
RDX-209ENST00000530131 GAPVD1Q14C86 1478 aa24.54■■□□□ 1.52
RDX-209ENST00000530131 CUL7Q14999 1698 aa24.52■■□□□ 1.52
RDX-209ENST00000530131 CEP162Q5TB80 1403 aa24.52■■□□□ 1.52
RDX-209ENST00000530131 CARMIL1Q5VZK9 1371 aa24.51■■□□□ 1.51
RDX-209ENST00000530131 PBRM1Q86U86 1689 aa24.47■■□□□ 1.51
RDX-209ENST00000530131 ZNF608Q9ULD9 1512 aaPredicted RBP24.45■■□□□ 1.5
RDX-209ENST00000530131 AQRO60306 1485 aaKnown RBP eCLIP24.43■■□□□ 1.5
RDX-209ENST00000530131 EIF4G3O43432 1585 aaKnown RBP24.39■■□□□ 1.5
RDX-209ENST00000530131 GRIN2BQ13224 1484 aa24.37■■□□□ 1.49
RDX-209ENST00000530131 CLIP1P30622 1438 aa24.34■■□□□ 1.49
RDX-209ENST00000530131 ADAMTS12P58397 1594 aa24.33■■□□□ 1.49
RDX-209ENST00000530131 FHAD1B1AJZ9 1412 aa24.27■■□□□ 1.48
RDX-209ENST00000530131 CTTNBP2Q8WZ74 1663 aa24.25■■□□□ 1.47
RDX-209ENST00000530131 SNAPC4Q5SXM2 1469 aa24.22■■□□□ 1.47
RDX-209ENST00000530131 MAGI1Q96QZ7 1491 aaPredicted RBP24.18■■□□□ 1.46
RDX-209ENST00000530131 ARAP1Q96P48 1450 aa24.16■■□□□ 1.46
RDX-209ENST00000530131 ARHGAP35Q9NRY4 1499 aa24.16■■□□□ 1.46
RDX-209ENST00000530131 RANGAP1P46060 587 aaPredicted RBP24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 177 ms