RNA–Protein interactions for RNA: ENST00000530127.1

KNDC1-205, Transcript of kinase non-catalytic C-lobe domain containing 1, humanhuman

TSL 3

Gene KNDC1, Length 643 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNDC1-205ENST00000530127 NISCHQ9Y2I1 1504 aa42.58■■■■■ 4.41
KNDC1-205ENST00000530127 CCDC180Q9P1Z9 1646 aa37.98■■■■□ 3.67
KNDC1-205ENST00000530127 ABCC9O60706 1549 aa37.61■■■■□ 3.61
KNDC1-205ENST00000530127 RB1CC1Q8TDY2 1594 aa35.95■■■■□ 3.35
KNDC1-205ENST00000530127 DCAF8L2P0C7V8 631 aa35.87■■■■□ 3.33
KNDC1-205ENST00000530127 NACADO15069 1562 aa35.8■■■■□ 3.32
KNDC1-205ENST00000530127 MYO15BQ96JP2 1530 aa35.4■■■■□ 3.26
KNDC1-205ENST00000530127 ZCCHC6Q5VYS8 1495 aaKnown RBP35.38■■■■□ 3.25
KNDC1-205ENST00000530127 UNC13AQ9UPW8 1703 aa35.18■■■■□ 3.22
KNDC1-205ENST00000530127 DCAF1Q9Y4B6 1507 aa35.14■■■■□ 3.22
KNDC1-205ENST00000530127 PABPN1Q86U42 306 aaKnown RBP eCLIP35.12■■■■□ 3.21
KNDC1-205ENST00000530127 BICRAQ9NZM4 1560 aa34.88■■■■□ 3.17
KNDC1-205ENST00000530127 DNAJC5BQ9UF47 199 aa34.83■■■■□ 3.17
KNDC1-205ENST00000530127 SCRIBQ14160 1630 aa34.73■■■■□ 3.15
KNDC1-205ENST00000530127 SHROOM4Q9ULL8 1493 aa34.39■■■■□ 3.1
KNDC1-205ENST00000530127 EIF4G1Q04637 1599 aaKnown RBP34■■■■□ 3.03
KNDC1-205ENST00000530127 CC2D2AQ9P2K1 1620 aa33.97■■■■□ 3.03
KNDC1-205ENST00000530127 CECR2Q9BXF3 1484 aa33.8■■■■□ 3
KNDC1-205ENST00000530127 SMARCA4P51532 1647 aa33.13■■■□□ 2.89
KNDC1-205ENST00000530127 NCAPD3P42695 1498 aa33.03■■■□□ 2.88
KNDC1-205ENST00000530127 ATAD2BQ9ULI0 1458 aa33.03■■■□□ 2.88
KNDC1-205ENST00000530127 BAZ1AQ9NRL2 1556 aaPredicted RBP33.02■■■□□ 2.88
KNDC1-205ENST00000530127 SMARCA2P51531 1590 aa32.96■■■□□ 2.87
KNDC1-205ENST00000530127 MROH2BQ7Z745 1585 aa32.84■■■□□ 2.85
KNDC1-205ENST00000530127 HMGXB3Q12766 1538 aa32.83■■■□□ 2.85
KNDC1-205ENST00000530127 BAZ1BQ9UIG0 1483 aaKnown RBP32.76■■■□□ 2.84
KNDC1-205ENST00000530127 PEG3Q9GZU2 1588 aa32.75■■■□□ 2.83
KNDC1-205ENST00000530127 WIZO95785 1651 aa32.5■■■□□ 2.79
KNDC1-205ENST00000530127 ERCC6Q03468 1493 aa32.44■■■□□ 2.78
KNDC1-205ENST00000530127 NESP48681 1621 aa32.44■■■□□ 2.78
KNDC1-205ENST00000530127 RSF1Q96T23 1441 aaPredicted RBP32.32■■■□□ 2.76
KNDC1-205ENST00000530127 LAMC3Q9Y6N6 1575 aa32.24■■■□□ 2.75
KNDC1-205ENST00000530127 CUX2O14529 1486 aa32.15■■■□□ 2.74
KNDC1-205ENST00000530127 TOP2AP11388 1531 aaKnown RBP32.08■■■□□ 2.73
KNDC1-205ENST00000530127 CADPSQ9ULU8 1353 aa32.07■■■□□ 2.73
KNDC1-205ENST00000530127 PDS5BQ9NTI5 1447 aa32.04■■■□□ 2.72
KNDC1-205ENST00000530127 KIF21AQ7Z4S6 1674 aa32.04■■■□□ 2.72
KNDC1-205ENST00000530127 THOC2Q8NI27 1593 aaKnown RBP31.98■■■□□ 2.71
KNDC1-205ENST00000530127 CFTRP13569 1480 aa31.8■■■□□ 2.68
KNDC1-205ENST00000530127 MRC2Q9UBG0 1479 aa31.75■■■□□ 2.67
KNDC1-205ENST00000530127 FANCD2Q9BXW9 1451 aa31.74■■■□□ 2.67
KNDC1-205ENST00000530127 CCDC88BA6NC98 1476 aa31.73■■■□□ 2.67
KNDC1-205ENST00000530127 CEP164Q9UPV0 1460 aa31.73■■■□□ 2.67
KNDC1-205ENST00000530127 WDR62O43379 1518 aa31.64■■■□□ 2.66
KNDC1-205ENST00000530127 DNAJC5Q9H3Z4 198 aa31.6■■■□□ 2.65
KNDC1-205ENST00000530127 PRDM2Q13029 1718 aa31.56■■■□□ 2.64
KNDC1-205ENST00000530127 URB2Q14146 1524 aaKnown RBP31.44■■■□□ 2.62
KNDC1-205ENST00000530127 SUPT5HO00267 1087 aaKnown RBP31.36■■■□□ 2.61
KNDC1-205ENST00000530127 TOPBP1Q92547 1522 aa31.19■■■□□ 2.58
KNDC1-205ENST00000530127 ABCC8Q09428 1581 aa31.11■■■□□ 2.57
KNDC1-205ENST00000530127 DNMBPQ6XZF7 1577 aa31.11■■■□□ 2.57
KNDC1-205ENST00000530127 IFT140Q96RY7 1462 aa31.06■■■□□ 2.56
KNDC1-205ENST00000530127 ZNF608Q9ULD9 1512 aaPredicted RBP30.99■■■□□ 2.55
KNDC1-205ENST00000530127 POLA1P09884 1462 aaPredicted RBP30.89■■■□□ 2.54
KNDC1-205ENST00000530127 TARBP1Q13395 1621 aaKnown RBP30.86■■■□□ 2.53
KNDC1-205ENST00000530127 EIF4G3O43432 1585 aaKnown RBP30.84■■■□□ 2.53
KNDC1-205ENST00000530127 CUX1P39880 1505 aa30.83■■■□□ 2.53
KNDC1-205ENST00000530127 RAD54L2Q9Y4B4 1467 aa30.81■■■□□ 2.52
KNDC1-205ENST00000530127 OSCARQ8IYS5 282 aa30.8■■■□□ 2.52
KNDC1-205ENST00000530127 AQRO60306 1485 aaKnown RBP eCLIP30.78■■■□□ 2.52
KNDC1-205ENST00000530127 FGD5Q6ZNL6 1462 aa30.78■■■□□ 2.52
KNDC1-205ENST00000530127 SOGA1O94964 1423 aa30.78■■■□□ 2.52
KNDC1-205ENST00000530127 TDRD9Q8NDG6 1382 aaKnown RBP30.67■■■□□ 2.5
KNDC1-205ENST00000530127 CHD1O14646 1710 aa30.55■■■□□ 2.48
KNDC1-205ENST00000530127 FBLN2P98095 1184 aa30.54■■■□□ 2.48
KNDC1-205ENST00000530127 WDR97A6NE52 1622 aa30.54■■■□□ 2.48
KNDC1-205ENST00000530127 TRIM41Q8WV44 630 aa30.53■■■□□ 2.48
KNDC1-205ENST00000530127 WRNQ14191 1432 aaPredicted RBP eCLIP30.49■■■□□ 2.47
KNDC1-205ENST00000530127 SNAPC4Q5SXM2 1469 aa30.48■■■□□ 2.47
KNDC1-205ENST00000530127 SYNJ1O43426 1573 aa30.45■■■□□ 2.47
KNDC1-205ENST00000530127 TOP2BQ02880 1626 aa30.45■■■□□ 2.47
KNDC1-205ENST00000530127 BIVM-ERCC5R4GMW8 1640 aa30.45■■■□□ 2.47
KNDC1-205ENST00000530127 GRIN2BQ13224 1484 aa30.44■■■□□ 2.46
KNDC1-205ENST00000530127 ABCA10Q8WWZ4 1543 aa30.43■■■□□ 2.46
KNDC1-205ENST00000530127 GAPVD1Q14C86 1478 aa30.41■■■□□ 2.46
KNDC1-205ENST00000530127 PBRM1Q86U86 1689 aa30.39■■■□□ 2.46
KNDC1-205ENST00000530127 MAGI1Q96QZ7 1491 aaPredicted RBP30.38■■■□□ 2.45
KNDC1-205ENST00000530127 RIMBP3CA6NJZ7 1639 aa30.36■■■□□ 2.45
KNDC1-205ENST00000530127 RIMBP3BA6NNM3 1639 aa30.36■■■□□ 2.45
KNDC1-205ENST00000530127 RIMBP3Q9UFD9 1639 aa30.36■■■□□ 2.45
KNDC1-205ENST00000530127 CHMP7Q8WUX9 453 aaPredicted RBP30.35■■■□□ 2.45
KNDC1-205ENST00000530127 ABCA5Q8WWZ7 1642 aa30.35■■■□□ 2.45
KNDC1-205ENST00000530127 ARHGEF11O15085 1522 aa30.3■■■□□ 2.44
KNDC1-205ENST00000530127 SYNJ2O15056 1496 aa30.28■■■□□ 2.44
KNDC1-205ENST00000530127 CLASP1Q7Z460 1538 aa30.15■■■□□ 2.42
KNDC1-205ENST00000530127 ADAMTS12P58397 1594 aa30.1■■■□□ 2.41
KNDC1-205ENST00000530127 CYB5RLQ6IPT4 315 aa30.09■■■□□ 2.41
KNDC1-205ENST00000530127 ERICH3Q5RHP9 1530 aa30.06■■■□□ 2.4
KNDC1-205ENST00000530127 GRIN2AQ12879 1464 aa30.06■■■□□ 2.4
KNDC1-205ENST00000530127 ARAP1Q96P48 1450 aa30.04■■■□□ 2.4
KNDC1-205ENST00000530127 FHAD1B1AJZ9 1412 aa30.03■■■□□ 2.4
KNDC1-205ENST00000530127 CEP170Q5SW79 1584 aa29.94■■■□□ 2.38
KNDC1-205ENST00000530127 NUP160Q12769 1436 aa29.9■■■□□ 2.38
KNDC1-205ENST00000530127 KIF27Q86VH2 1401 aa29.88■■■□□ 2.37
KNDC1-205ENST00000530127 IGF1RP08069 1367 aa29.8■■■□□ 2.36
KNDC1-205ENST00000530127 ERCC6L2Q5T890 1561 aa29.77■■■□□ 2.36
KNDC1-205ENST00000530127 CUL7Q14999 1698 aa29.73■■■□□ 2.35
KNDC1-205ENST00000530127 SHROOM2Q13796 1616 aa29.72■■■□□ 2.35
KNDC1-205ENST00000530127 RUSC2Q8N2Y8 1516 aa29.66■■■□□ 2.34
KNDC1-205ENST00000530127 TRHP20396 242 aaPredicted RBP29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms