RNA–Protein interactions for RNA: ENST00000530013.5

FBXO3-207, Transcript of F-box protein 3, humanhuman

TSL 1 (best)

Gene FBXO3, Length 3,740 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO3-207ENST00000530013 NISCHQ9Y2I1 1504 aa19.54■□□□□ 0.72
FBXO3-207ENST00000530013 CCDC180Q9P1Z9 1646 aa17.35■□□□□ 0.37
FBXO3-207ENST00000530013 ZCCHC6Q5VYS8 1495 aaKnown RBP16.42■□□□□ 0.22
FBXO3-207ENST00000530013 DCAF1Q9Y4B6 1507 aa16.35■□□□□ 0.21
FBXO3-207ENST00000530013 MYO15BQ96JP2 1530 aa16.27■□□□□ 0.19
FBXO3-207ENST00000530013 ABCC9O60706 1549 aa16.14■□□□□ 0.17
FBXO3-207ENST00000530013 NACADO15069 1562 aa16.1■□□□□ 0.17
FBXO3-207ENST00000530013 RB1CC1Q8TDY2 1594 aa15.96■□□□□ 0.15
FBXO3-207ENST00000530013 DCAF8L2P0C7V8 631 aa15.68■□□□□ 0.1
FBXO3-207ENST00000530013 UNC13AQ9UPW8 1703 aa15.68■□□□□ 0.1
FBXO3-207ENST00000530013 SCRIBQ14160 1630 aa15.62■□□□□ 0.09
FBXO3-207ENST00000530013 SHROOM4Q9ULL8 1493 aa15.5■□□□□ 0.07
FBXO3-207ENST00000530013 BICRAQ9NZM4 1560 aa15.46■□□□□ 0.07
FBXO3-207ENST00000530013 BAZ1AQ9NRL2 1556 aaPredicted RBP15.14■□□□□ 0.01
FBXO3-207ENST00000530013 SMARCA4P51532 1647 aa15.1■□□□□ 0.01
FBXO3-207ENST00000530013 PEG3Q9GZU2 1588 aa15.05■□□□□ -0
FBXO3-207ENST00000530013 CECR2Q9BXF3 1484 aa15.05■□□□□ -0
FBXO3-207ENST00000530013 PABPN1Q86U42 306 aaKnown RBP eCLIP15.04■□□□□ -0
FBXO3-207ENST00000530013 MROH2BQ7Z745 1585 aa15□□□□□ -0.01
FBXO3-207ENST00000530013 RSF1Q96T23 1441 aaPredicted RBP14.99□□□□□ -0.01
FBXO3-207ENST00000530013 EIF4G1Q04637 1599 aaKnown RBP14.97□□□□□ -0.01
FBXO3-207ENST00000530013 SMARCA2P51531 1590 aa14.9□□□□□ -0.02
FBXO3-207ENST00000530013 WIZO95785 1651 aa14.89□□□□□ -0.03
FBXO3-207ENST00000530013 TOP2AP11388 1531 aaKnown RBP14.84□□□□□ -0.03
FBXO3-207ENST00000530013 HMGXB3Q12766 1538 aa14.84□□□□□ -0.03
FBXO3-207ENST00000530013 ATAD2BQ9ULI0 1458 aa14.82□□□□□ -0.04
FBXO3-207ENST00000530013 NCAPD3P42695 1498 aa14.78□□□□□ -0.04
FBXO3-207ENST00000530013 CC2D2AQ9P2K1 1620 aa14.78□□□□□ -0.04
FBXO3-207ENST00000530013 BAZ1BQ9UIG0 1483 aaKnown RBP14.7□□□□□ -0.06
FBXO3-207ENST00000530013 SUPT5HO00267 1087 aaKnown RBP14.68□□□□□ -0.06
FBXO3-207ENST00000530013 CCDC88BA6NC98 1476 aa14.55□□□□□ -0.08
FBXO3-207ENST00000530013 PRDM2Q13029 1718 aa14.53□□□□□ -0.08
FBXO3-207ENST00000530013 CFTRP13569 1480 aa14.38□□□□□ -0.11
FBXO3-207ENST00000530013 LAMC3Q9Y6N6 1575 aa14.37□□□□□ -0.11
FBXO3-207ENST00000530013 CADPSQ9ULU8 1353 aa14.3□□□□□ -0.12
FBXO3-207ENST00000530013 DNAJC5BQ9UF47 199 aa14.3□□□□□ -0.12
FBXO3-207ENST00000530013 BIVM-ERCC5R4GMW8 1640 aa14.21□□□□□ -0.13
FBXO3-207ENST00000530013 TOP2BQ02880 1626 aa14.16□□□□□ -0.14
FBXO3-207ENST00000530013 KIF21AQ7Z4S6 1674 aa14.15□□□□□ -0.14
FBXO3-207ENST00000530013 PDS5BQ9NTI5 1447 aa14.14□□□□□ -0.15
FBXO3-207ENST00000530013 FANCD2Q9BXW9 1451 aa14.14□□□□□ -0.15
FBXO3-207ENST00000530013 NESP48681 1621 aa14.13□□□□□ -0.15
FBXO3-207ENST00000530013 ABCC8Q09428 1581 aa14.12□□□□□ -0.15
FBXO3-207ENST00000530013 CHIC1Q5VXU3 224 aa14.12□□□□□ -0.15
FBXO3-207ENST00000530013 SYNJ1O43426 1573 aa14.11□□□□□ -0.15
FBXO3-207ENST00000530013 WRNQ14191 1432 aaPredicted RBP eCLIP14.11□□□□□ -0.15
FBXO3-207ENST00000530013 CEP164Q9UPV0 1460 aa14.1□□□□□ -0.15
FBXO3-207ENST00000530013 DNMBPQ6XZF7 1577 aa14.09□□□□□ -0.15
FBXO3-207ENST00000530013 CUX1P39880 1505 aa14.07□□□□□ -0.16
FBXO3-207ENST00000530013 THOC2Q8NI27 1593 aaKnown RBP14.02□□□□□ -0.17
FBXO3-207ENST00000530013 WDR62O43379 1518 aa14.02□□□□□ -0.17
FBXO3-207ENST00000530013 MRC2Q9UBG0 1479 aa14□□□□□ -0.17
FBXO3-207ENST00000530013 TOPBP1Q92547 1522 aa14□□□□□ -0.17
FBXO3-207ENST00000530013 URB2Q14146 1524 aaKnown RBP13.99□□□□□ -0.17
FBXO3-207ENST00000530013 WDR97A6NE52 1622 aa13.98□□□□□ -0.17
FBXO3-207ENST00000530013 TRIM41Q8WV44 630 aa13.95□□□□□ -0.18
FBXO3-207ENST00000530013 EEA1Q15075 1411 aa13.94□□□□□ -0.18
FBXO3-207ENST00000530013 FGD5Q6ZNL6 1462 aa13.92□□□□□ -0.18
FBXO3-207ENST00000530013 ERCC6Q03468 1493 aa13.9□□□□□ -0.18
FBXO3-207ENST00000530013 POLA1P09884 1462 aaPredicted RBP13.89□□□□□ -0.19
FBXO3-207ENST00000530013 TARBP1Q13395 1621 aaKnown RBP13.89□□□□□ -0.19
FBXO3-207ENST00000530013 ABCA10Q8WWZ4 1543 aa13.89□□□□□ -0.19
FBXO3-207ENST00000530013 ABCA5Q8WWZ7 1642 aa13.84□□□□□ -0.19
FBXO3-207ENST00000530013 IFT140Q96RY7 1462 aa13.82□□□□□ -0.2
FBXO3-207ENST00000530013 CUX2O14529 1486 aa13.81□□□□□ -0.2
FBXO3-207ENST00000530013 KIF21BO75037 1637 aa13.8□□□□□ -0.2
FBXO3-207ENST00000530013 KIF27Q86VH2 1401 aa13.79□□□□□ -0.2
FBXO3-207ENST00000530013 SOGA1O94964 1423 aa13.78□□□□□ -0.2
FBXO3-207ENST00000530013 CUL7Q14999 1698 aa13.77□□□□□ -0.2
FBXO3-207ENST00000530013 PBRM1Q86U86 1689 aa13.76□□□□□ -0.21
FBXO3-207ENST00000530013 ERICH3Q5RHP9 1530 aa13.76□□□□□ -0.21
FBXO3-207ENST00000530013 RAD54L2Q9Y4B4 1467 aa13.74□□□□□ -0.21
FBXO3-207ENST00000530013 RUSC2Q8N2Y8 1516 aa13.73□□□□□ -0.21
FBXO3-207ENST00000530013 EIF4G3O43432 1585 aaKnown RBP13.7□□□□□ -0.22
FBXO3-207ENST00000530013 PRXQ9BXM0 1461 aa13.7□□□□□ -0.22
FBXO3-207ENST00000530013 GAPVD1Q14C86 1478 aa13.68□□□□□ -0.22
FBXO3-207ENST00000530013 CSRNP3Q8WYN3 585 aa13.65□□□□□ -0.22
FBXO3-207ENST00000530013 ADAMTS12P58397 1594 aa13.65□□□□□ -0.22
FBXO3-207ENST00000530013 GOLGA3Q08378 1498 aa13.65□□□□□ -0.23
FBXO3-207ENST00000530013 IGF1RP08069 1367 aa13.64□□□□□ -0.23
FBXO3-207ENST00000530013 GRIN2BQ13224 1484 aa13.64□□□□□ -0.23
FBXO3-207ENST00000530013 ZNF608Q9ULD9 1512 aaPredicted RBP13.61□□□□□ -0.23
FBXO3-207ENST00000530013 MAGI1Q96QZ7 1491 aaPredicted RBP13.61□□□□□ -0.23
FBXO3-207ENST00000530013 RAPGEF2Q9Y4G8 1499 aa13.59□□□□□ -0.23
FBXO3-207ENST00000530013 CTTNBP2Q8WZ74 1663 aa13.59□□□□□ -0.23
FBXO3-207ENST00000530013 FHAD1B1AJZ9 1412 aa13.57□□□□□ -0.24
FBXO3-207ENST00000530013 TDRD9Q8NDG6 1382 aaKnown RBP13.56□□□□□ -0.24
FBXO3-207ENST00000530013 AQRO60306 1485 aaKnown RBP eCLIP13.55□□□□□ -0.246e-9■■■■■ 37.6
FBXO3-207ENST00000530013 CARMIL1Q5VZK9 1371 aa13.55□□□□□ -0.24
FBXO3-207ENST00000530013 TNIKQ9UKE5 1360 aa13.55□□□□□ -0.24
FBXO3-207ENST00000530013 SNAPC4Q5SXM2 1469 aa13.52□□□□□ -0.25
FBXO3-207ENST00000530013 SYNJ2O15056 1496 aa13.51□□□□□ -0.25
FBXO3-207ENST00000530013 FAM9AQ8IZU1 332 aaPredicted RBP13.49□□□□□ -0.25
FBXO3-207ENST00000530013 GRIN2AQ12879 1464 aa13.47□□□□□ -0.25
FBXO3-207ENST00000530013 CHD1O14646 1710 aa13.46□□□□□ -0.26
FBXO3-207ENST00000530013 EFCAB5A4FU69 1503 aa13.43□□□□□ -0.26
FBXO3-207ENST00000530013 NUP160Q12769 1436 aa13.42□□□□□ -0.26
FBXO3-207ENST00000530013 SAMD9Q5K651 1589 aa13.42□□□□□ -0.26
FBXO3-207ENST00000530013 LOC105371045A0A1W2PR82 267 aa13.41□□□□□ -0.26
FBXO3-207ENST00000530013 IQGAP2Q13576 1575 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms