RNA–Protein interactions for RNA: ENST00000530006.5

MCAM-213, Transcript of melanoma cell adhesion molecule, humanhuman

TSL 2

Gene MCAM, Length 562 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCAM-213ENST00000530006 NISCHQ9Y2I1 1504 aa35.99■■■■□ 3.35
MCAM-213ENST00000530006 ABCC9O60706 1549 aa32.51■■■□□ 2.8
MCAM-213ENST00000530006 CCDC180Q9P1Z9 1646 aa32.34■■■□□ 2.77
MCAM-213ENST00000530006 RB1CC1Q8TDY2 1594 aa30.88■■■□□ 2.53
MCAM-213ENST00000530006 DNAJC5BQ9UF47 199 aa30.63■■■□□ 2.49
MCAM-213ENST00000530006 NACADO15069 1562 aa30.62■■■□□ 2.49
MCAM-213ENST00000530006 DCAF8L2P0C7V8 631 aa30.55■■■□□ 2.48
MCAM-213ENST00000530006 PABPN1Q86U42 306 aaKnown RBP eCLIP30.28■■■□□ 2.44
MCAM-213ENST00000530006 UNC13AQ9UPW8 1703 aa30.16■■■□□ 2.42
MCAM-213ENST00000530006 MYO15BQ96JP2 1530 aa30.13■■■□□ 2.41
MCAM-213ENST00000530006 BICRAQ9NZM4 1560 aa29.95■■■□□ 2.39
MCAM-213ENST00000530006 ZCCHC6Q5VYS8 1495 aaKnown RBP29.78■■■□□ 2.36
MCAM-213ENST00000530006 DCAF1Q9Y4B6 1507 aa29.7■■■□□ 2.34
MCAM-213ENST00000530006 SHROOM4Q9ULL8 1493 aa29.53■■■□□ 2.32
MCAM-213ENST00000530006 SCRIBQ14160 1630 aa29.48■■■□□ 2.31
MCAM-213ENST00000530006 CC2D2AQ9P2K1 1620 aa29.35■■■□□ 2.29
MCAM-213ENST00000530006 CECR2Q9BXF3 1484 aa29.3■■■□□ 2.28
MCAM-213ENST00000530006 EIF4G1Q04637 1599 aaKnown RBP29.25■■■□□ 2.27
MCAM-213ENST00000530006 NCAPD3P42695 1498 aa28.27■■■□□ 2.12
MCAM-213ENST00000530006 DNAJC5Q9H3Z4 198 aa28.24■■■□□ 2.11
MCAM-213ENST00000530006 ATAD2BQ9ULI0 1458 aa28.17■■■□□ 2.1
MCAM-213ENST00000530006 SMARCA4P51532 1647 aa28.1■■■□□ 2.09
MCAM-213ENST00000530006 ERCC6Q03468 1493 aa28.1■■■□□ 2.09
MCAM-213ENST00000530006 SMARCA2P51531 1590 aa28.09■■■□□ 2.09
MCAM-213ENST00000530006 CUX2O14529 1486 aa28.06■■■□□ 2.08
MCAM-213ENST00000530006 HMGXB3Q12766 1538 aa28.03■■■□□ 2.08
MCAM-213ENST00000530006 BAZ1AQ9NRL2 1556 aaPredicted RBP27.95■■■□□ 2.07
MCAM-213ENST00000530006 BAZ1BQ9UIG0 1483 aaKnown RBP27.9■■■□□ 2.06
MCAM-213ENST00000530006 NESP48681 1621 aa27.89■■■□□ 2.05
MCAM-213ENST00000530006 PEG3Q9GZU2 1588 aa27.82■■■□□ 2.04
MCAM-213ENST00000530006 MROH2BQ7Z745 1585 aa27.73■■■□□ 2.03
MCAM-213ENST00000530006 LAMC3Q9Y6N6 1575 aa27.66■■■□□ 2.02
MCAM-213ENST00000530006 THOC2Q8NI27 1593 aaKnown RBP27.6■■■□□ 2.01
MCAM-213ENST00000530006 PDS5BQ9NTI5 1447 aa27.53■■■□□ 2
MCAM-213ENST00000530006 KIF21AQ7Z4S6 1674 aa27.52■■■□□ 2
MCAM-213ENST00000530006 CADPSQ9ULU8 1353 aa27.43■■□□□ 1.98
MCAM-213ENST00000530006 WIZO95785 1651 aa27.41■■□□□ 1.98
MCAM-213ENST00000530006 MRC2Q9UBG0 1479 aa27.28■■□□□ 1.96
MCAM-213ENST00000530006 WDR62O43379 1518 aa27.2■■□□□ 1.94
MCAM-213ENST00000530006 CEP164Q9UPV0 1460 aa27.15■■□□□ 1.94
MCAM-213ENST00000530006 RSF1Q96T23 1441 aaPredicted RBP27.11■■□□□ 1.93
MCAM-213ENST00000530006 FANCD2Q9BXW9 1451 aa27.11■■□□□ 1.93
MCAM-213ENST00000530006 CFTRP13569 1480 aa27.07■■□□□ 1.92
MCAM-213ENST00000530006 TOP2AP11388 1531 aaKnown RBP27.03■■□□□ 1.92
MCAM-213ENST00000530006 TRIM41Q8WV44 630 aa26.98■■□□□ 1.91
MCAM-213ENST00000530006 URB2Q14146 1524 aaKnown RBP26.88■■□□□ 1.89
MCAM-213ENST00000530006 OSCARQ8IYS5 282 aa26.82■■□□□ 1.88
MCAM-213ENST00000530006 PRDM2Q13029 1718 aa26.78■■□□□ 1.88
MCAM-213ENST00000530006 CCDC88BA6NC98 1476 aa26.75■■□□□ 1.87
MCAM-213ENST00000530006 IFT140Q96RY7 1462 aa26.62■■□□□ 1.85
MCAM-213ENST00000530006 ZNF608Q9ULD9 1512 aaPredicted RBP26.59■■□□□ 1.85
MCAM-213ENST00000530006 TOPBP1Q92547 1522 aa26.58■■□□□ 1.85
MCAM-213ENST00000530006 ABCC8Q09428 1581 aa26.53■■□□□ 1.84
MCAM-213ENST00000530006 SUPT5HO00267 1087 aaKnown RBP26.5■■□□□ 1.83
MCAM-213ENST00000530006 DNMBPQ6XZF7 1577 aa26.46■■□□□ 1.83
MCAM-213ENST00000530006 RIMBP3CA6NJZ7 1639 aa26.43■■□□□ 1.82
MCAM-213ENST00000530006 RIMBP3BA6NNM3 1639 aa26.43■■□□□ 1.82
MCAM-213ENST00000530006 RIMBP3Q9UFD9 1639 aa26.43■■□□□ 1.82
MCAM-213ENST00000530006 EIF4G3O43432 1585 aaKnown RBP26.41■■□□□ 1.82
MCAM-213ENST00000530006 AQRO60306 1485 aaKnown RBP eCLIP26.35■■□□□ 1.815e-6■■■■■ 28
MCAM-213ENST00000530006 TARBP1Q13395 1621 aaKnown RBP26.34■■□□□ 1.81
MCAM-213ENST00000530006 ARHGEF11O15085 1522 aa26.34■■□□□ 1.81
MCAM-213ENST00000530006 POLA1P09884 1462 aaPredicted RBP26.3■■□□□ 1.8
MCAM-213ENST00000530006 CHD1O14646 1710 aa26.26■■□□□ 1.79
MCAM-213ENST00000530006 FBLN2P98095 1184 aa26.26■■□□□ 1.79
MCAM-213ENST00000530006 RAD54L2Q9Y4B4 1467 aa26.22■■□□□ 1.79
MCAM-213ENST00000530006 CYB5RLQ6IPT4 315 aa26.21■■□□□ 1.79
MCAM-213ENST00000530006 SOGA1O94964 1423 aa26.21■■□□□ 1.79
MCAM-213ENST00000530006 TDRD9Q8NDG6 1382 aaKnown RBP26.18■■□□□ 1.78
MCAM-213ENST00000530006 FGD5Q6ZNL6 1462 aa26.11■■□□□ 1.77
MCAM-213ENST00000530006 SNAPC4Q5SXM2 1469 aa26.05■■□□□ 1.76
MCAM-213ENST00000530006 ARAP1Q96P48 1450 aa26.05■■□□□ 1.76
MCAM-213ENST00000530006 CUX1P39880 1505 aa26.05■■□□□ 1.76
MCAM-213ENST00000530006 WDR97A6NE52 1622 aa26.05■■□□□ 1.76
MCAM-213ENST00000530006 CHMP7Q8WUX9 453 aaPredicted RBP26.03■■□□□ 1.76
MCAM-213ENST00000530006 TRHP20396 242 aaPredicted RBP25.98■■□□□ 1.75
MCAM-213ENST00000530006 GRIN2BQ13224 1484 aa25.98■■□□□ 1.75
MCAM-213ENST00000530006 MAGI1Q96QZ7 1491 aaPredicted RBP25.98■■□□□ 1.75
MCAM-213ENST00000530006 SYNJ1O43426 1573 aa25.94■■□□□ 1.74
MCAM-213ENST00000530006 CLASP1Q7Z460 1538 aa25.93■■□□□ 1.74
MCAM-213ENST00000530006 SYNJ2O15056 1496 aa25.9■■□□□ 1.74
MCAM-213ENST00000530006 GAPVD1Q14C86 1478 aa25.87■■□□□ 1.73
MCAM-213ENST00000530006 PBRM1Q86U86 1689 aa25.85■■□□□ 1.73
MCAM-213ENST00000530006 ABCA10Q8WWZ4 1543 aa25.8■■□□□ 1.72
MCAM-213ENST00000530006 ABCA5Q8WWZ7 1642 aa25.77■■□□□ 1.72
MCAM-213ENST00000530006 WRNQ14191 1432 aaPredicted RBP eCLIP25.7■■□□□ 1.7
MCAM-213ENST00000530006 GRIN2AQ12879 1464 aa25.63■■□□□ 1.69
MCAM-213ENST00000530006 TOP2BQ02880 1626 aa25.61■■□□□ 1.69
MCAM-213ENST00000530006 BIVM-ERCC5R4GMW8 1640 aa25.61■■□□□ 1.69
MCAM-213ENST00000530006 ADAMTS12P58397 1594 aa25.57■■□□□ 1.68
MCAM-213ENST00000530006 NUP160Q12769 1436 aa25.54■■□□□ 1.68
MCAM-213ENST00000530006 CEP170Q5SW79 1584 aa25.53■■□□□ 1.68
MCAM-213ENST00000530006 ERCC6L2Q5T890 1561 aa25.53■■□□□ 1.68
MCAM-213ENST00000530006 FHAD1B1AJZ9 1412 aa25.53■■□□□ 1.68
MCAM-213ENST00000530006 ERICH3Q5RHP9 1530 aa25.48■■□□□ 1.67
MCAM-213ENST00000530006 SHROOM2Q13796 1616 aa25.44■■□□□ 1.66
MCAM-213ENST00000530006 AEBP2Q6ZN18 517 aaPredicted RBP25.34■■□□□ 1.65
MCAM-213ENST00000530006 JPH4Q96JJ6 628 aa25.34■■□□□ 1.65
MCAM-213ENST00000530006 PRG4Q92954 1404 aaPredicted RBP25.34■■□□□ 1.65
MCAM-213ENST00000530006 RUSC2Q8N2Y8 1516 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 207.9 ms