RNA–Protein interactions for RNA: ENST00000529998.5

UBASH3B-205, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 4

Gene UBASH3B, Length 698 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-205ENST00000529998 NISCHQ9Y2I1 1504 aa21.01■□□□□ 0.95
UBASH3B-205ENST00000529998 CCDC180Q9P1Z9 1646 aa18.65■□□□□ 0.58
UBASH3B-205ENST00000529998 ABCC9O60706 1549 aa18.2■□□□□ 0.5
UBASH3B-205ENST00000529998 DCAF8L2P0C7V8 631 aa17.55■□□□□ 0.4
UBASH3B-205ENST00000529998 RB1CC1Q8TDY2 1594 aa17.51■□□□□ 0.39
UBASH3B-205ENST00000529998 ZCCHC6Q5VYS8 1495 aaKnown RBP17.5■□□□□ 0.39
UBASH3B-205ENST00000529998 NACADO15069 1562 aa17.5■□□□□ 0.39
UBASH3B-205ENST00000529998 AEBP2Q6ZN18 517 aaPredicted RBP17.5■□□□□ 0.39
UBASH3B-205ENST00000529998 MYO15BQ96JP2 1530 aa17.4■□□□□ 0.38
UBASH3B-205ENST00000529998 DCAF1Q9Y4B6 1507 aa17.37■□□□□ 0.37
UBASH3B-205ENST00000529998 UNC13AQ9UPW8 1703 aa17.2■□□□□ 0.34
UBASH3B-205ENST00000529998 SCRIBQ14160 1630 aa17.04■□□□□ 0.32
UBASH3B-205ENST00000529998 PABPN1Q86U42 306 aaKnown RBP eCLIP17.03■□□□□ 0.32
UBASH3B-205ENST00000529998 BICRAQ9NZM4 1560 aa17.02■□□□□ 0.32
UBASH3B-205ENST00000529998 SHROOM4Q9ULL8 1493 aa16.75■□□□□ 0.27
UBASH3B-205ENST00000529998 DNAJC5BQ9UF47 199 aa16.69■□□□□ 0.26
UBASH3B-205ENST00000529998 EIF4G1Q04637 1599 aaKnown RBP16.54■□□□□ 0.24
UBASH3B-205ENST00000529998 CC2D2AQ9P2K1 1620 aa16.48■□□□□ 0.23
UBASH3B-205ENST00000529998 CECR2Q9BXF3 1484 aa16.39■□□□□ 0.21
UBASH3B-205ENST00000529998 CHIC1Q5VXU3 224 aa16.33■□□□□ 0.2
UBASH3B-205ENST00000529998 SMARCA4P51532 1647 aa16.3■□□□□ 0.2
UBASH3B-205ENST00000529998 BAZ1AQ9NRL2 1556 aaPredicted RBP16.26■□□□□ 0.19
UBASH3B-205ENST00000529998 MROH2BQ7Z745 1585 aa16.21■□□□□ 0.19
UBASH3B-205ENST00000529998 ATAD2BQ9ULI0 1458 aa16.18■□□□□ 0.18
UBASH3B-205ENST00000529998 NCAPD3P42695 1498 aa16.16■□□□□ 0.18
UBASH3B-205ENST00000529998 SMARCA2P51531 1590 aa16.15■□□□□ 0.18
UBASH3B-205ENST00000529998 PEG3Q9GZU2 1588 aa16.13■□□□□ 0.17
UBASH3B-205ENST00000529998 HMGXB3Q12766 1538 aa16.07■□□□□ 0.16
UBASH3B-205ENST00000529998 WIZO95785 1651 aa16.07■□□□□ 0.16
UBASH3B-205ENST00000529998 BAZ1BQ9UIG0 1483 aaKnown RBP16.04■□□□□ 0.16
UBASH3B-205ENST00000529998 RSF1Q96T23 1441 aaPredicted RBP16.04■□□□□ 0.16
UBASH3B-205ENST00000529998 TOP2AP11388 1531 aaKnown RBP15.85■□□□□ 0.13
UBASH3B-205ENST00000529998 NESP48681 1621 aa15.79■□□□□ 0.12
UBASH3B-205ENST00000529998 LAMC3Q9Y6N6 1575 aa15.72■□□□□ 0.11
UBASH3B-205ENST00000529998 SUPT5HO00267 1087 aaKnown RBP15.7■□□□□ 0.1
UBASH3B-205ENST00000529998 CADPSQ9ULU8 1353 aa15.69■□□□□ 0.1
UBASH3B-205ENST00000529998 CCDC88BA6NC98 1476 aa15.69■□□□□ 0.1
UBASH3B-205ENST00000529998 ERCC6Q03468 1493 aa15.65■□□□□ 0.1
UBASH3B-205ENST00000529998 KIF21AQ7Z4S6 1674 aa15.62■□□□□ 0.09
UBASH3B-205ENST00000529998 CFTRP13569 1480 aa15.61■□□□□ 0.09
UBASH3B-205ENST00000529998 PDS5BQ9NTI5 1447 aa15.6■□□□□ 0.09
UBASH3B-205ENST00000529998 PRDM2Q13029 1718 aa15.54■□□□□ 0.08
UBASH3B-205ENST00000529998 THOC2Q8NI27 1593 aaKnown RBP15.52■□□□□ 0.07
UBASH3B-205ENST00000529998 FANCD2Q9BXW9 1451 aa15.51■□□□□ 0.07
UBASH3B-205ENST00000529998 CEP164Q9UPV0 1460 aa15.47■□□□□ 0.07
UBASH3B-205ENST00000529998 CUX2O14529 1486 aa15.45■□□□□ 0.06
UBASH3B-205ENST00000529998 MRC2Q9UBG0 1479 aa15.44■□□□□ 0.06
UBASH3B-205ENST00000529998 WDR62O43379 1518 aa15.39■□□□□ 0.05
UBASH3B-205ENST00000529998 URB2Q14146 1524 aaKnown RBP15.38■□□□□ 0.05
UBASH3B-205ENST00000529998 TOPBP1Q92547 1522 aa15.28■□□□□ 0.04
UBASH3B-205ENST00000529998 DNMBPQ6XZF7 1577 aa15.26■□□□□ 0.03
UBASH3B-205ENST00000529998 ABCC8Q09428 1581 aa15.25■□□□□ 0.03
UBASH3B-205ENST00000529998 CUX1P39880 1505 aa15.2■□□□□ 0.02
UBASH3B-205ENST00000529998 POLA1P09884 1462 aaPredicted RBP15.15■□□□□ 0.02
UBASH3B-205ENST00000529998 IFT140Q96RY7 1462 aa15.14■□□□□ 0.01
UBASH3B-205ENST00000529998 TARBP1Q13395 1621 aaKnown RBP15.13■□□□□ 0.01
UBASH3B-205ENST00000529998 FGD5Q6ZNL6 1462 aa15.13■□□□□ 0.01
UBASH3B-205ENST00000529998 RAD54L2Q9Y4B4 1467 aa15.11■□□□□ 0.01
UBASH3B-205ENST00000529998 ZNF608Q9ULD9 1512 aaPredicted RBP15.11■□□□□ 0.01
UBASH3B-205ENST00000529998 WRNQ14191 1432 aaPredicted RBP eCLIP15.1■□□□□ 0.01
UBASH3B-205ENST00000529998 SYNJ1O43426 1573 aa15.1■□□□□ 0.01
UBASH3B-205ENST00000529998 SOGA1O94964 1423 aa15.09■□□□□ 0.01
UBASH3B-205ENST00000529998 BIVM-ERCC5R4GMW8 1640 aa15.09■□□□□ 0.01
UBASH3B-205ENST00000529998 TOP2BQ02880 1626 aa15.08■□□□□ 0
UBASH3B-205ENST00000529998 EIF4G3O43432 1585 aaKnown RBP15.04■□□□□ -0
UBASH3B-205ENST00000529998 SENP3Q9H4L4 574 aaPredicted RBP15.04■□□□□ -0
UBASH3B-205ENST00000529998 AQRO60306 1485 aaKnown RBP eCLIP15.03■□□□□ -0
UBASH3B-205ENST00000529998 WDR97A6NE52 1622 aa15.03■□□□□ -0
UBASH3B-205ENST00000529998 TDRD9Q8NDG6 1382 aaKnown RBP15.01□□□□□ -0.01
UBASH3B-205ENST00000529998 ABCA10Q8WWZ4 1543 aa14.97□□□□□ -0.01
UBASH3B-205ENST00000529998 DNAJC5Q9H3Z4 198 aa14.94□□□□□ -0.02
UBASH3B-205ENST00000529998 ABCA5Q8WWZ7 1642 aa14.92□□□□□ -0.02
UBASH3B-205ENST00000529998 GAPVD1Q14C86 1478 aa14.92□□□□□ -0.02
UBASH3B-205ENST00000529998 PBRM1Q86U86 1689 aa14.91□□□□□ -0.02
UBASH3B-205ENST00000529998 GRIN2BQ13224 1484 aa14.89□□□□□ -0.03
UBASH3B-205ENST00000529998 SNAPC4Q5SXM2 1469 aa14.88□□□□□ -0.03
UBASH3B-205ENST00000529998 CHD1O14646 1710 aa14.87□□□□□ -0.03
UBASH3B-205ENST00000529998 OSCARQ8IYS5 282 aa14.85□□□□□ -0.03
UBASH3B-205ENST00000529998 MAGI1Q96QZ7 1491 aaPredicted RBP14.83□□□□□ -0.03
UBASH3B-205ENST00000529998 FBLN2P98095 1184 aa14.83□□□□□ -0.04
UBASH3B-205ENST00000529998 TRIM41Q8WV44 630 aa14.81□□□□□ -0.04
UBASH3B-205ENST00000529998 SYNJ2O15056 1496 aa14.79□□□□□ -0.04
UBASH3B-205ENST00000529998 ERICH3Q5RHP9 1530 aa14.79□□□□□ -0.04
UBASH3B-205ENST00000529998 CHMP7Q8WUX9 453 aaPredicted RBP14.78□□□□□ -0.04
UBASH3B-205ENST00000529998 KIF27Q86VH2 1401 aa14.77□□□□□ -0.04
UBASH3B-205ENST00000529998 ADAMTS12P58397 1594 aa14.77□□□□□ -0.05
UBASH3B-205ENST00000529998 PHF23Q9BUL5 403 aaPredicted RBP14.75□□□□□ -0.05
UBASH3B-205ENST00000529998 IGF1RP08069 1367 aa14.73□□□□□ -0.05
UBASH3B-205ENST00000529998 RUSC2Q8N2Y8 1516 aa14.73□□□□□ -0.05
UBASH3B-205ENST00000529998 FHAD1B1AJZ9 1412 aa14.73□□□□□ -0.05
UBASH3B-205ENST00000529998 GRIN2AQ12879 1464 aa14.71□□□□□ -0.05
UBASH3B-205ENST00000529998 CUL7Q14999 1698 aa14.68□□□□□ -0.06
UBASH3B-205ENST00000529998 CLASP1Q7Z460 1538 aa14.67□□□□□ -0.06
UBASH3B-205ENST00000529998 CEP170Q5SW79 1584 aa14.66□□□□□ -0.06
UBASH3B-205ENST00000529998 CARMIL1Q5VZK9 1371 aa14.64□□□□□ -0.07
UBASH3B-205ENST00000529998 NUP160Q12769 1436 aa14.64□□□□□ -0.07
UBASH3B-205ENST00000529998 RIMBP3CA6NJZ7 1639 aa14.63□□□□□ -0.07
UBASH3B-205ENST00000529998 RIMBP3BA6NNM3 1639 aa14.63□□□□□ -0.07
UBASH3B-205ENST00000529998 RIMBP3Q9UFD9 1639 aa14.63□□□□□ -0.07
UBASH3B-205ENST00000529998 ARHGEF11O15085 1522 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms