RNA–Protein interactions for RNA: ENST00000529975.5

CSRP1-212, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 4

Gene CSRP1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-212ENST00000529975 NISCHQ9Y2I1 1504 aa35.55■■■■□ 3.28
CSRP1-212ENST00000529975 CCDC180Q9P1Z9 1646 aa31.8■■■□□ 2.68
CSRP1-212ENST00000529975 ABCC9O60706 1549 aa31.44■■■□□ 2.62
CSRP1-212ENST00000529975 RB1CC1Q8TDY2 1594 aa30.13■■■□□ 2.41
CSRP1-212ENST00000529975 NACADO15069 1562 aa30■■■□□ 2.39
CSRP1-212ENST00000529975 DCAF8L2P0C7V8 631 aa29.78■■■□□ 2.36
CSRP1-212ENST00000529975 MYO15BQ96JP2 1530 aa29.74■■■□□ 2.35
CSRP1-212ENST00000529975 ZCCHC6Q5VYS8 1495 aaKnown RBP29.55■■■□□ 2.32
CSRP1-212ENST00000529975 DCAF1Q9Y4B6 1507 aa29.45■■■□□ 2.3
CSRP1-212ENST00000529975 UNC13AQ9UPW8 1703 aa29.36■■■□□ 2.29
CSRP1-212ENST00000529975 PABPN1Q86U42 306 aaKnown RBP eCLIP29.28■■■□□ 2.28
CSRP1-212ENST00000529975 BICRAQ9NZM4 1560 aa29.19■■■□□ 2.26
CSRP1-212ENST00000529975 DNAJC5BQ9UF47 199 aa29.18■■■□□ 2.26
CSRP1-212ENST00000529975 SHROOM4Q9ULL8 1493 aa28.96■■■□□ 2.23
CSRP1-212ENST00000529975 SCRIBQ14160 1630 aa28.93■■■□□ 2.22
CSRP1-212ENST00000529975 EIF4G1Q04637 1599 aaKnown RBP28.48■■■□□ 2.15
CSRP1-212ENST00000529975 CC2D2AQ9P2K1 1620 aa28.43■■■□□ 2.14
CSRP1-212ENST00000529975 CECR2Q9BXF3 1484 aa28.33■■■□□ 2.13
CSRP1-212ENST00000529975 NCAPD3P42695 1498 aa27.69■■■□□ 2.02
CSRP1-212ENST00000529975 SMARCA4P51532 1647 aa27.67■■■□□ 2.02
CSRP1-212ENST00000529975 ATAD2BQ9ULI0 1458 aa27.62■■■□□ 2.01
CSRP1-212ENST00000529975 BAZ1AQ9NRL2 1556 aaPredicted RBP27.6■■■□□ 2.01
CSRP1-212ENST00000529975 SMARCA2P51531 1590 aa27.59■■■□□ 2.01
CSRP1-212ENST00000529975 HMGXB3Q12766 1538 aa27.52■■■□□ 2
CSRP1-212ENST00000529975 PEG3Q9GZU2 1588 aa27.44■■□□□ 1.98
CSRP1-212ENST00000529975 BAZ1BQ9UIG0 1483 aaKnown RBP27.38■■□□□ 1.97
CSRP1-212ENST00000529975 MROH2BQ7Z745 1585 aa27.35■■□□□ 1.97
CSRP1-212ENST00000529975 ERCC6Q03468 1493 aa27.16■■□□□ 1.94
CSRP1-212ENST00000529975 NESP48681 1621 aa27.08■■□□□ 1.93
CSRP1-212ENST00000529975 CUX2O14529 1486 aa27.06■■□□□ 1.92
CSRP1-212ENST00000529975 WIZO95785 1651 aa27.02■■□□□ 1.92
CSRP1-212ENST00000529975 LAMC3Q9Y6N6 1575 aa27.02■■□□□ 1.92
CSRP1-212ENST00000529975 RSF1Q96T23 1441 aaPredicted RBP26.91■■□□□ 1.9
CSRP1-212ENST00000529975 PDS5BQ9NTI5 1447 aa26.86■■□□□ 1.89
CSRP1-212ENST00000529975 CADPSQ9ULU8 1353 aa26.84■■□□□ 1.89
CSRP1-212ENST00000529975 THOC2Q8NI27 1593 aaKnown RBP26.8■■□□□ 1.88
CSRP1-212ENST00000529975 TOP2AP11388 1531 aaKnown RBP26.77■■□□□ 1.88
CSRP1-212ENST00000529975 KIF21AQ7Z4S6 1674 aa26.75■■□□□ 1.87
CSRP1-212ENST00000529975 DNAJC5Q9H3Z4 198 aa26.64■■□□□ 1.86
CSRP1-212ENST00000529975 CFTRP13569 1480 aa26.61■■□□□ 1.85
CSRP1-212ENST00000529975 MRC2Q9UBG0 1479 aa26.59■■□□□ 1.85
CSRP1-212ENST00000529975 CEP164Q9UPV0 1460 aa26.55■■□□□ 1.84
CSRP1-212ENST00000529975 FANCD2Q9BXW9 1451 aa26.53■■□□□ 1.84
CSRP1-212ENST00000529975 WDR62O43379 1518 aa26.53■■□□□ 1.84
CSRP1-212ENST00000529975 CCDC88BA6NC98 1476 aa26.42■■□□□ 1.82
CSRP1-212ENST00000529975 PRDM2Q13029 1718 aa26.34■■□□□ 1.81
CSRP1-212ENST00000529975 URB2Q14146 1524 aaKnown RBP26.28■■□□□ 1.8
CSRP1-212ENST00000529975 ABCC8Q09428 1581 aa26.07■■□□□ 1.76
CSRP1-212ENST00000529975 TOPBP1Q92547 1522 aa26.05■■□□□ 1.76
CSRP1-212ENST00000529975 IFT140Q96RY7 1462 aa26.02■■□□□ 1.76
CSRP1-212ENST00000529975 DNMBPQ6XZF7 1577 aa26■■□□□ 1.75
CSRP1-212ENST00000529975 ZNF608Q9ULD9 1512 aaPredicted RBP25.88■■□□□ 1.73
CSRP1-212ENST00000529975 SUPT5HO00267 1087 aaKnown RBP25.87■■□□□ 1.73
CSRP1-212ENST00000529975 OSCARQ8IYS5 282 aa25.82■■□□□ 1.72
CSRP1-212ENST00000529975 POLA1P09884 1462 aaPredicted RBP25.81■■□□□ 1.72
CSRP1-212ENST00000529975 TARBP1Q13395 1621 aaKnown RBP25.8■■□□□ 1.72
CSRP1-212ENST00000529975 EIF4G3O43432 1585 aaKnown RBP25.79■■□□□ 1.72
CSRP1-212ENST00000529975 CUX1P39880 1505 aa25.69■■□□□ 1.7
CSRP1-212ENST00000529975 SOGA1O94964 1423 aa25.69■■□□□ 1.7
CSRP1-212ENST00000529975 AQRO60306 1485 aaKnown RBP eCLIP25.68■■□□□ 1.7
CSRP1-212ENST00000529975 FGD5Q6ZNL6 1462 aa25.68■■□□□ 1.7
CSRP1-212ENST00000529975 RAD54L2Q9Y4B4 1467 aa25.67■■□□□ 1.7
CSRP1-212ENST00000529975 WDR97A6NE52 1622 aa25.65■■□□□ 1.7
CSRP1-212ENST00000529975 TDRD9Q8NDG6 1382 aaKnown RBP25.56■■□□□ 1.68
CSRP1-212ENST00000529975 TRIM41Q8WV44 630 aa25.55■■□□□ 1.68
CSRP1-212ENST00000529975 CHD1O14646 1710 aa25.5■■□□□ 1.67
CSRP1-212ENST00000529975 GRIN2BQ13224 1484 aa25.46■■□□□ 1.67
CSRP1-212ENST00000529975 SNAPC4Q5SXM2 1469 aa25.46■■□□□ 1.67
CSRP1-212ENST00000529975 MAGI1Q96QZ7 1491 aaPredicted RBP25.45■■□□□ 1.66
CSRP1-212ENST00000529975 FBLN2P98095 1184 aa25.44■■□□□ 1.66
CSRP1-212ENST00000529975 RIMBP3CA6NJZ7 1639 aa25.44■■□□□ 1.66
CSRP1-212ENST00000529975 RIMBP3BA6NNM3 1639 aa25.44■■□□□ 1.66
CSRP1-212ENST00000529975 RIMBP3Q9UFD9 1639 aa25.44■■□□□ 1.66
CSRP1-212ENST00000529975 ABCA10Q8WWZ4 1543 aa25.43■■□□□ 1.66
CSRP1-212ENST00000529975 ARHGEF11O15085 1522 aa25.42■■□□□ 1.66
CSRP1-212ENST00000529975 WRNQ14191 1432 aaPredicted RBP eCLIP25.4■■□□□ 1.66
CSRP1-212ENST00000529975 GAPVD1Q14C86 1478 aa25.4■■□□□ 1.66
CSRP1-212ENST00000529975 TOP2BQ02880 1626 aa25.39■■□□□ 1.66
CSRP1-212ENST00000529975 BIVM-ERCC5R4GMW8 1640 aa25.39■■□□□ 1.66
CSRP1-212ENST00000529975 ABCA5Q8WWZ7 1642 aa25.36■■□□□ 1.65
CSRP1-212ENST00000529975 PBRM1Q86U86 1689 aa25.35■■□□□ 1.65
CSRP1-212ENST00000529975 SYNJ2O15056 1496 aa25.34■■□□□ 1.65
CSRP1-212ENST00000529975 CHMP7Q8WUX9 453 aaPredicted RBP25.34■■□□□ 1.65
CSRP1-212ENST00000529975 SYNJ1O43426 1573 aa25.34■■□□□ 1.65
CSRP1-212ENST00000529975 CLASP1Q7Z460 1538 aa25.27■■□□□ 1.64
CSRP1-212ENST00000529975 ARAP1Q96P48 1450 aa25.16■■□□□ 1.62
CSRP1-212ENST00000529975 CYB5RLQ6IPT4 315 aa25.16■■□□□ 1.62
CSRP1-212ENST00000529975 ADAMTS12P58397 1594 aa25.15■■□□□ 1.62
CSRP1-212ENST00000529975 ERICH3Q5RHP9 1530 aa25.14■■□□□ 1.62
CSRP1-212ENST00000529975 GRIN2AQ12879 1464 aa25.13■■□□□ 1.61
CSRP1-212ENST00000529975 FHAD1B1AJZ9 1412 aa25.1■■□□□ 1.61
CSRP1-212ENST00000529975 NUP160Q12769 1436 aa25.04■■□□□ 1.6
CSRP1-212ENST00000529975 CEP170Q5SW79 1584 aa25■■□□□ 1.59
CSRP1-212ENST00000529975 KIF27Q86VH2 1401 aa24.92■■□□□ 1.58
CSRP1-212ENST00000529975 SHROOM2Q13796 1616 aa24.89■■□□□ 1.57
CSRP1-212ENST00000529975 IGF1RP08069 1367 aa24.83■■□□□ 1.57
CSRP1-212ENST00000529975 ERCC6L2Q5T890 1561 aa24.83■■□□□ 1.57
CSRP1-212ENST00000529975 CUL7Q14999 1698 aa24.82■■□□□ 1.56
CSRP1-212ENST00000529975 TRHP20396 242 aaPredicted RBP24.79■■□□□ 1.56
CSRP1-212ENST00000529975 RUSC2Q8N2Y8 1516 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms