RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 NISCHQ9Y2I1 1504 aa40.74■■■■■ 4.11
COL16A1-216ENST00000529928 ABCC9O60706 1549 aa36.97■■■■□ 3.51
COL16A1-216ENST00000529928 CCDC180Q9P1Z9 1646 aa36.72■■■■□ 3.47
COL16A1-216ENST00000529928 RB1CC1Q8TDY2 1594 aa35.1■■■■□ 3.21
COL16A1-216ENST00000529928 DNAJC5BQ9UF47 199 aa34.91■■■■□ 3.18
COL16A1-216ENST00000529928 NACADO15069 1562 aa34.79■■■■□ 3.16
COL16A1-216ENST00000529928 DCAF8L2P0C7V8 631 aa34.49■■■■□ 3.11
COL16A1-216ENST00000529928 PABPN1Q86U42 306 aaKnown RBP eCLIP34.35■■■■□ 3.09
COL16A1-216ENST00000529928 UNC13AQ9UPW8 1703 aa34.24■■■■□ 3.07
COL16A1-216ENST00000529928 MYO15BQ96JP2 1530 aa34.23■■■■□ 3.07
COL16A1-216ENST00000529928 BICRAQ9NZM4 1560 aa34.05■■■■□ 3.04
COL16A1-216ENST00000529928 ZCCHC6Q5VYS8 1495 aaKnown RBP33.7■■■□□ 2.99
COL16A1-216ENST00000529928 DCAF1Q9Y4B6 1507 aa33.67■■■□□ 2.98
COL16A1-216ENST00000529928 SHROOM4Q9ULL8 1493 aa33.64■■■□□ 2.98
COL16A1-216ENST00000529928 CC2D2AQ9P2K1 1620 aa33.39■■■□□ 2.94
COL16A1-216ENST00000529928 SCRIBQ14160 1630 aa33.39■■■□□ 2.93
COL16A1-216ENST00000529928 CECR2Q9BXF3 1484 aa33.36■■■□□ 2.93
COL16A1-216ENST00000529928 EIF4G1Q04637 1599 aaKnown RBP33.26■■■□□ 2.92
COL16A1-216ENST00000529928 DNAJC5Q9H3Z4 198 aa32.34■■■□□ 2.77
COL16A1-216ENST00000529928 NCAPD3P42695 1498 aa32.11■■■□□ 2.73
COL16A1-216ENST00000529928 CUX2O14529 1486 aa32.03■■■□□ 2.72
COL16A1-216ENST00000529928 ERCC6Q03468 1493 aa31.97■■■□□ 2.71
COL16A1-216ENST00000529928 ATAD2BQ9ULI0 1458 aa31.96■■■□□ 2.71
COL16A1-216ENST00000529928 SMARCA2P51531 1590 aa31.88■■■□□ 2.69
COL16A1-216ENST00000529928 HMGXB3Q12766 1538 aa31.85■■■□□ 2.69
COL16A1-216ENST00000529928 SMARCA4P51532 1647 aa31.84■■■□□ 2.69
COL16A1-216ENST00000529928 BAZ1AQ9NRL2 1556 aaPredicted RBP31.67■■■□□ 2.66
COL16A1-216ENST00000529928 NESP48681 1621 aa31.66■■■□□ 2.66
COL16A1-216ENST00000529928 BAZ1BQ9UIG0 1483 aaKnown RBP31.65■■■□□ 2.66
COL16A1-216ENST00000529928 PEG3Q9GZU2 1588 aa31.56■■■□□ 2.64
COL16A1-216ENST00000529928 LAMC3Q9Y6N6 1575 aa31.45■■■□□ 2.63
COL16A1-216ENST00000529928 THOC2Q8NI27 1593 aaKnown RBP31.43■■■□□ 2.62
COL16A1-216ENST00000529928 MROH2BQ7Z745 1585 aa31.37■■■□□ 2.61
COL16A1-216ENST00000529928 PDS5BQ9NTI5 1447 aa31.28■■■□□ 2.6
COL16A1-216ENST00000529928 KIF21AQ7Z4S6 1674 aa31.25■■■□□ 2.59
COL16A1-216ENST00000529928 CADPSQ9ULU8 1353 aa31.12■■■□□ 2.57
COL16A1-216ENST00000529928 MRC2Q9UBG0 1479 aa31.01■■■□□ 2.56
COL16A1-216ENST00000529928 WIZO95785 1651 aa30.97■■■□□ 2.55
COL16A1-216ENST00000529928 WDR62O43379 1518 aa30.94■■■□□ 2.54
COL16A1-216ENST00000529928 CEP164Q9UPV0 1460 aa30.84■■■□□ 2.53
COL16A1-216ENST00000529928 TRIM41Q8WV44 630 aa30.78■■■□□ 2.52
COL16A1-216ENST00000529928 FANCD2Q9BXW9 1451 aa30.76■■■□□ 2.52
COL16A1-216ENST00000529928 CFTRP13569 1480 aa30.7■■■□□ 2.51
COL16A1-216ENST00000529928 RSF1Q96T23 1441 aaPredicted RBP30.62■■■□□ 2.49
COL16A1-216ENST00000529928 TOP2AP11388 1531 aaKnown RBP30.59■■■□□ 2.49
COL16A1-216ENST00000529928 OSCARQ8IYS5 282 aa30.51■■■□□ 2.47
COL16A1-216ENST00000529928 URB2Q14146 1524 aaKnown RBP30.51■■■□□ 2.47
COL16A1-216ENST00000529928 PRDM2Q13029 1718 aa30.36■■■□□ 2.45
COL16A1-216ENST00000529928 CCDC88BA6NC98 1476 aa30.23■■■□□ 2.43
COL16A1-216ENST00000529928 IFT140Q96RY7 1462 aa30.23■■■□□ 2.43
COL16A1-216ENST00000529928 ZNF608Q9ULD9 1512 aaPredicted RBP30.17■■■□□ 2.42
COL16A1-216ENST00000529928 TOPBP1Q92547 1522 aa30.14■■■□□ 2.42
COL16A1-216ENST00000529928 RIMBP3CA6NJZ7 1639 aa30.12■■■□□ 2.41
COL16A1-216ENST00000529928 RIMBP3BA6NNM3 1639 aa30.12■■■□□ 2.41
COL16A1-216ENST00000529928 RIMBP3Q9UFD9 1639 aa30.12■■■□□ 2.41
COL16A1-216ENST00000529928 ABCC8Q09428 1581 aa30.1■■■□□ 2.41
COL16A1-216ENST00000529928 EIF4G3O43432 1585 aaKnown RBP30.02■■■□□ 2.4
COL16A1-216ENST00000529928 ARHGEF11O15085 1522 aa30.01■■■□□ 2.4
COL16A1-216ENST00000529928 DNMBPQ6XZF7 1577 aa30.01■■■□□ 2.39
COL16A1-216ENST00000529928 TARBP1Q13395 1621 aaKnown RBP29.89■■■□□ 2.37
COL16A1-216ENST00000529928 AQRO60306 1485 aaKnown RBP eCLIP29.87■■■□□ 2.37
COL16A1-216ENST00000529928 CHD1O14646 1710 aa29.82■■■□□ 2.36
COL16A1-216ENST00000529928 POLA1P09884 1462 aaPredicted RBP29.81■■■□□ 2.36
COL16A1-216ENST00000529928 CYB5RLQ6IPT4 315 aa29.79■■■□□ 2.36
COL16A1-216ENST00000529928 FBLN2P98095 1184 aa29.74■■■□□ 2.35
COL16A1-216ENST00000529928 ARAP1Q96P48 1450 aa29.68■■■□□ 2.34
COL16A1-216ENST00000529928 RAD54L2Q9Y4B4 1467 aa29.68■■■□□ 2.34
COL16A1-216ENST00000529928 SOGA1O94964 1423 aa29.67■■■□□ 2.34
COL16A1-216ENST00000529928 TDRD9Q8NDG6 1382 aaKnown RBP29.64■■■□□ 2.34
COL16A1-216ENST00000529928 WDR97A6NE52 1622 aa29.61■■■□□ 2.33
COL16A1-216ENST00000529928 FGD5Q6ZNL6 1462 aa29.58■■■□□ 2.33
COL16A1-216ENST00000529928 TRHP20396 242 aaPredicted RBP29.57■■■□□ 2.32
COL16A1-216ENST00000529928 SNAPC4Q5SXM2 1469 aa29.56■■■□□ 2.32
COL16A1-216ENST00000529928 MAGI1Q96QZ7 1491 aaPredicted RBP29.5■■■□□ 2.31
COL16A1-216ENST00000529928 CUX1P39880 1505 aa29.5■■■□□ 2.31
COL16A1-216ENST00000529928 CLASP1Q7Z460 1538 aa29.5■■■□□ 2.31
COL16A1-216ENST00000529928 CHMP7Q8WUX9 453 aaPredicted RBP29.49■■■□□ 2.31
COL16A1-216ENST00000529928 SYNJ1O43426 1573 aa29.47■■■□□ 2.31
COL16A1-216ENST00000529928 GRIN2BQ13224 1484 aa29.47■■■□□ 2.31
COL16A1-216ENST00000529928 SYNJ2O15056 1496 aa29.41■■■□□ 2.3
COL16A1-216ENST00000529928 GAPVD1Q14C86 1478 aa29.31■■■□□ 2.28
COL16A1-216ENST00000529928 PBRM1Q86U86 1689 aa29.3■■■□□ 2.28
COL16A1-216ENST00000529928 ABCA10Q8WWZ4 1543 aa29.24■■■□□ 2.27
COL16A1-216ENST00000529928 ABCA5Q8WWZ7 1642 aa29.21■■■□□ 2.27
COL16A1-216ENST00000529928 GRIN2AQ12879 1464 aa29.09■■■□□ 2.25
COL16A1-216ENST00000529928 WRNQ14191 1432 aaPredicted RBP eCLIP29.07■■■□□ 2.24
COL16A1-216ENST00000529928 ADAMTS12P58397 1594 aa29.01■■■□□ 2.24
COL16A1-216ENST00000529928 SUPT5HO00267 1087 aaKnown RBP29.01■■■□□ 2.23
COL16A1-216ENST00000529928 NUP160Q12769 1436 aa29■■■□□ 2.23
COL16A1-216ENST00000529928 ERCC6L2Q5T890 1561 aa28.98■■■□□ 2.23
COL16A1-216ENST00000529928 CEP170Q5SW79 1584 aa28.97■■■□□ 2.23
COL16A1-216ENST00000529928 TOP2BQ02880 1626 aa28.96■■■□□ 2.23
COL16A1-216ENST00000529928 BIVM-ERCC5R4GMW8 1640 aa28.96■■■□□ 2.23
COL16A1-216ENST00000529928 AEBP2Q6ZN18 517 aaPredicted RBP28.95■■■□□ 2.22
COL16A1-216ENST00000529928 FHAD1B1AJZ9 1412 aa28.94■■■□□ 2.22
COL16A1-216ENST00000529928 SHROOM2Q13796 1616 aa28.9■■■□□ 2.22
COL16A1-216ENST00000529928 ERICH3Q5RHP9 1530 aa28.88■■■□□ 2.21
COL16A1-216ENST00000529928 PRG4Q92954 1404 aaPredicted RBP28.73■■■□□ 2.19
COL16A1-216ENST00000529928 JPH4Q96JJ6 628 aa28.68■■■□□ 2.18
COL16A1-216ENST00000529928 KIF13AQ9H1H9 1805 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms