RNA–Protein interactions for RNA: ENST00000529854.1

GSDMD-209, Transcript of gasdermin D, humanhuman

TSL 4

Gene GSDMD, Length 511 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-209ENST00000529854 NISCHQ9Y2I1 1504 aa41.49■■■■■ 4.23
GSDMD-209ENST00000529854 CCDC180Q9P1Z9 1646 aa36.88■■■■□ 3.49
GSDMD-209ENST00000529854 ABCC9O60706 1549 aa36.24■■■■□ 3.39
GSDMD-209ENST00000529854 RB1CC1Q8TDY2 1594 aa34.75■■■■□ 3.15
GSDMD-209ENST00000529854 DCAF8L2P0C7V8 631 aa34.75■■■■□ 3.15
GSDMD-209ENST00000529854 NACADO15069 1562 aa34.68■■■■□ 3.14
GSDMD-209ENST00000529854 ZCCHC6Q5VYS8 1495 aaKnown RBP34.57■■■■□ 3.12
GSDMD-209ENST00000529854 MYO15BQ96JP2 1530 aa34.41■■■■□ 3.1
GSDMD-209ENST00000529854 DCAF1Q9Y4B6 1507 aa34.26■■■■□ 3.08
GSDMD-209ENST00000529854 UNC13AQ9UPW8 1703 aa34.01■■■■□ 3.04
GSDMD-209ENST00000529854 PABPN1Q86U42 306 aaKnown RBP eCLIP33.87■■■■□ 3.01
GSDMD-209ENST00000529854 BICRAQ9NZM4 1560 aa33.75■■■□□ 2.99
GSDMD-209ENST00000529854 SCRIBQ14160 1630 aa33.75■■■□□ 2.99
GSDMD-209ENST00000529854 DNAJC5BQ9UF47 199 aa33.33■■■□□ 2.93
GSDMD-209ENST00000529854 SHROOM4Q9ULL8 1493 aa33.28■■■□□ 2.92
GSDMD-209ENST00000529854 EIF4G1Q04637 1599 aaKnown RBP32.86■■■□□ 2.85
GSDMD-209ENST00000529854 CC2D2AQ9P2K1 1620 aa32.75■■■□□ 2.83
GSDMD-209ENST00000529854 CECR2Q9BXF3 1484 aa32.54■■■□□ 2.8
GSDMD-209ENST00000529854 SMARCA4P51532 1647 aa32.22■■■□□ 2.75
GSDMD-209ENST00000529854 BAZ1AQ9NRL2 1556 aaPredicted RBP32.15■■■□□ 2.74
GSDMD-209ENST00000529854 ATAD2BQ9ULI0 1458 aa32.06■■■□□ 2.72
GSDMD-209ENST00000529854 MROH2BQ7Z745 1585 aa32.02■■■□□ 2.72
GSDMD-209ENST00000529854 NCAPD3P42695 1498 aa32.01■■■□□ 2.71
GSDMD-209ENST00000529854 SMARCA2P51531 1590 aa31.98■■■□□ 2.71
GSDMD-209ENST00000529854 PEG3Q9GZU2 1588 aa31.86■■■□□ 2.69
GSDMD-209ENST00000529854 HMGXB3Q12766 1538 aa31.85■■■□□ 2.69
GSDMD-209ENST00000529854 BAZ1BQ9UIG0 1483 aaKnown RBP31.79■■■□□ 2.68
GSDMD-209ENST00000529854 WIZO95785 1651 aa31.68■■■□□ 2.66
GSDMD-209ENST00000529854 RSF1Q96T23 1441 aaPredicted RBP31.61■■■□□ 2.65
GSDMD-209ENST00000529854 NESP48681 1621 aa31.36■■■□□ 2.61
GSDMD-209ENST00000529854 TOP2AP11388 1531 aaKnown RBP31.3■■■□□ 2.6
GSDMD-209ENST00000529854 ERCC6Q03468 1493 aa31.21■■■□□ 2.59
GSDMD-209ENST00000529854 LAMC3Q9Y6N6 1575 aa31.17■■■□□ 2.58
GSDMD-209ENST00000529854 CADPSQ9ULU8 1353 aa31.09■■■□□ 2.57
GSDMD-209ENST00000529854 PDS5BQ9NTI5 1447 aa30.97■■■□□ 2.55
GSDMD-209ENST00000529854 KIF21AQ7Z4S6 1674 aa30.96■■■□□ 2.55
GSDMD-209ENST00000529854 CCDC88BA6NC98 1476 aa30.95■■■□□ 2.54
GSDMD-209ENST00000529854 CFTRP13569 1480 aa30.89■■■□□ 2.54
GSDMD-209ENST00000529854 THOC2Q8NI27 1593 aaKnown RBP30.86■■■□□ 2.53
GSDMD-209ENST00000529854 CUX2O14529 1486 aa30.85■■■□□ 2.53
GSDMD-209ENST00000529854 SUPT5HO00267 1087 aaKnown RBP30.83■■■□□ 2.53
GSDMD-209ENST00000529854 FANCD2Q9BXW9 1451 aa30.76■■■□□ 2.52
GSDMD-209ENST00000529854 CEP164Q9UPV0 1460 aa30.72■■■□□ 2.51
GSDMD-209ENST00000529854 MRC2Q9UBG0 1479 aa30.69■■■□□ 2.5
GSDMD-209ENST00000529854 PRDM2Q13029 1718 aa30.65■■■□□ 2.5
GSDMD-209ENST00000529854 WDR62O43379 1518 aa30.58■■■□□ 2.49
GSDMD-209ENST00000529854 URB2Q14146 1524 aaKnown RBP30.48■■■□□ 2.47
GSDMD-209ENST00000529854 TOPBP1Q92547 1522 aa30.27■■■□□ 2.44
GSDMD-209ENST00000529854 DNMBPQ6XZF7 1577 aa30.21■■■□□ 2.43
GSDMD-209ENST00000529854 ABCC8Q09428 1581 aa30.18■■■□□ 2.42
GSDMD-209ENST00000529854 IFT140Q96RY7 1462 aa30.06■■■□□ 2.4
GSDMD-209ENST00000529854 CUX1P39880 1505 aa30.04■■■□□ 2.4
GSDMD-209ENST00000529854 POLA1P09884 1462 aaPredicted RBP30.01■■■□□ 2.4
GSDMD-209ENST00000529854 ZNF608Q9ULD9 1512 aaPredicted RBP30■■■□□ 2.39
GSDMD-209ENST00000529854 DNAJC5Q9H3Z4 198 aa29.99■■■□□ 2.39
GSDMD-209ENST00000529854 FGD5Q6ZNL6 1462 aa29.94■■■□□ 2.38
GSDMD-209ENST00000529854 TARBP1Q13395 1621 aaKnown RBP29.93■■■□□ 2.38
GSDMD-209ENST00000529854 RAD54L2Q9Y4B4 1467 aa29.93■■■□□ 2.38
GSDMD-209ENST00000529854 SOGA1O94964 1423 aa29.88■■■□□ 2.37
GSDMD-209ENST00000529854 EIF4G3O43432 1585 aaKnown RBP29.86■■■□□ 2.37
GSDMD-209ENST00000529854 AQRO60306 1485 aaKnown RBP eCLIP29.8■■■□□ 2.36
GSDMD-209ENST00000529854 WRNQ14191 1432 aaPredicted RBP eCLIP29.8■■■□□ 2.36
GSDMD-209ENST00000529854 SYNJ1O43426 1573 aa29.77■■■□□ 2.36
GSDMD-209ENST00000529854 TDRD9Q8NDG6 1382 aaKnown RBP29.76■■■□□ 2.35
GSDMD-209ENST00000529854 TOP2BQ02880 1626 aa29.73■■■□□ 2.35
GSDMD-209ENST00000529854 BIVM-ERCC5R4GMW8 1640 aa29.73■■■□□ 2.35
GSDMD-209ENST00000529854 WDR97A6NE52 1622 aa29.68■■■□□ 2.34
GSDMD-209ENST00000529854 ABCA10Q8WWZ4 1543 aa29.61■■■□□ 2.33
GSDMD-209ENST00000529854 OSCARQ8IYS5 282 aa29.57■■■□□ 2.32
GSDMD-209ENST00000529854 SNAPC4Q5SXM2 1469 aa29.54■■■□□ 2.32
GSDMD-209ENST00000529854 GAPVD1Q14C86 1478 aa29.53■■■□□ 2.32
GSDMD-209ENST00000529854 GRIN2BQ13224 1484 aa29.52■■■□□ 2.32
GSDMD-209ENST00000529854 ABCA5Q8WWZ7 1642 aa29.52■■■□□ 2.32
GSDMD-209ENST00000529854 CHD1O14646 1710 aa29.5■■■□□ 2.31
GSDMD-209ENST00000529854 PBRM1Q86U86 1689 aa29.48■■■□□ 2.31
GSDMD-209ENST00000529854 FBLN2P98095 1184 aa29.47■■■□□ 2.31
GSDMD-209ENST00000529854 MAGI1Q96QZ7 1491 aaPredicted RBP29.43■■■□□ 2.3
GSDMD-209ENST00000529854 CHMP7Q8WUX9 453 aaPredicted RBP29.34■■■□□ 2.29
GSDMD-209ENST00000529854 SYNJ2O15056 1496 aa29.34■■■□□ 2.29
GSDMD-209ENST00000529854 ADAMTS12P58397 1594 aa29.26■■■□□ 2.27
GSDMD-209ENST00000529854 ERICH3Q5RHP9 1530 aa29.24■■■□□ 2.27
GSDMD-209ENST00000529854 FHAD1B1AJZ9 1412 aa29.17■■■□□ 2.26
GSDMD-209ENST00000529854 KIF27Q86VH2 1401 aa29.16■■■□□ 2.26
GSDMD-209ENST00000529854 GRIN2AQ12879 1464 aa29.16■■■□□ 2.26
GSDMD-209ENST00000529854 RIMBP3CA6NJZ7 1639 aa29.16■■■□□ 2.26
GSDMD-209ENST00000529854 RIMBP3BA6NNM3 1639 aa29.16■■■□□ 2.26
GSDMD-209ENST00000529854 RIMBP3Q9UFD9 1639 aa29.16■■■□□ 2.26
GSDMD-209ENST00000529854 CLASP1Q7Z460 1538 aa29.15■■■□□ 2.26
GSDMD-209ENST00000529854 ARHGEF11O15085 1522 aa29.14■■■□□ 2.25
GSDMD-209ENST00000529854 IGF1RP08069 1367 aa29.06■■■□□ 2.24
GSDMD-209ENST00000529854 TRIM41Q8WV44 630 aa29.06■■■□□ 2.24
GSDMD-209ENST00000529854 CEP170Q5SW79 1584 aa29.04■■■□□ 2.24
GSDMD-209ENST00000529854 NUP160Q12769 1436 aa29.02■■■□□ 2.24
GSDMD-209ENST00000529854 CUL7Q14999 1698 aa28.97■■■□□ 2.23
GSDMD-209ENST00000529854 RUSC2Q8N2Y8 1516 aa28.97■■■□□ 2.23
GSDMD-209ENST00000529854 ARAP1Q96P48 1450 aa28.91■■■□□ 2.22
GSDMD-209ENST00000529854 CARMIL1Q5VZK9 1371 aa28.89■■■□□ 2.22
GSDMD-209ENST00000529854 CYB5RLQ6IPT4 315 aa28.88■■■□□ 2.21
GSDMD-209ENST00000529854 ERCC6L2Q5T890 1561 aa28.81■■■□□ 2.2
GSDMD-209ENST00000529854 SHROOM2Q13796 1616 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms