RNA–Protein interactions for RNA: ENST00000529780.5

ZNF250-207, Transcript of zinc finger protein 250, humanhuman

TSL 3

Gene ZNF250, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-207ENST00000529780 NISCHQ9Y2I1 1504 aa32.47■■■□□ 2.79
ZNF250-207ENST00000529780 CCDC180Q9P1Z9 1646 aa28.89■■■□□ 2.22
ZNF250-207ENST00000529780 ABCC9O60706 1549 aa28.33■■■□□ 2.13
ZNF250-207ENST00000529780 RB1CC1Q8TDY2 1594 aa27.19■■□□□ 1.94
ZNF250-207ENST00000529780 DCAF8L2P0C7V8 631 aa27.17■■□□□ 1.94
ZNF250-207ENST00000529780 NACADO15069 1562 aa27.14■■□□□ 1.93
ZNF250-207ENST00000529780 ZCCHC6Q5VYS8 1495 aaKnown RBP27.05■■□□□ 1.92
ZNF250-207ENST00000529780 MYO15BQ96JP2 1530 aa26.93■■□□□ 1.9
ZNF250-207ENST00000529780 DCAF1Q9Y4B6 1507 aa26.82■■□□□ 1.88
ZNF250-207ENST00000529780 UNC13AQ9UPW8 1703 aa26.67■■□□□ 1.86
ZNF250-207ENST00000529780 PABPN1Q86U42 306 aaKnown RBP eCLIP26.46■■□□□ 1.83
ZNF250-207ENST00000529780 SCRIBQ14160 1630 aa26.42■■□□□ 1.82
ZNF250-207ENST00000529780 BICRAQ9NZM4 1560 aa26.41■■□□□ 1.82
ZNF250-207ENST00000529780 SHROOM4Q9ULL8 1493 aa26.03■■□□□ 1.76
ZNF250-207ENST00000529780 DNAJC5BQ9UF47 199 aa26.02■■□□□ 1.76
ZNF250-207ENST00000529780 EIF4G1Q04637 1599 aaKnown RBP25.69■■□□□ 1.7
ZNF250-207ENST00000529780 CC2D2AQ9P2K1 1620 aa25.61■■□□□ 1.69
ZNF250-207ENST00000529780 CECR2Q9BXF3 1484 aa25.42■■□□□ 1.66
ZNF250-207ENST00000529780 SMARCA4P51532 1647 aa25.23■■□□□ 1.63
ZNF250-207ENST00000529780 BAZ1AQ9NRL2 1556 aaPredicted RBP25.16■■□□□ 1.62
ZNF250-207ENST00000529780 ATAD2BQ9ULI0 1458 aa25.07■■□□□ 1.6
ZNF250-207ENST00000529780 MROH2BQ7Z745 1585 aa25.05■■□□□ 1.6
ZNF250-207ENST00000529780 SMARCA2P51531 1590 aa25.03■■□□□ 1.6
ZNF250-207ENST00000529780 NCAPD3P42695 1498 aa25.02■■□□□ 1.6
ZNF250-207ENST00000529780 PEG3Q9GZU2 1588 aa24.94■■□□□ 1.58
ZNF250-207ENST00000529780 HMGXB3Q12766 1538 aa24.92■■□□□ 1.58
ZNF250-207ENST00000529780 BAZ1BQ9UIG0 1483 aaKnown RBP24.87■■□□□ 1.57
ZNF250-207ENST00000529780 WIZO95785 1651 aa24.81■■□□□ 1.56
ZNF250-207ENST00000529780 RSF1Q96T23 1441 aaPredicted RBP24.74■■□□□ 1.55
ZNF250-207ENST00000529780 NESP48681 1621 aa24.52■■□□□ 1.52
ZNF250-207ENST00000529780 TOP2AP11388 1531 aaKnown RBP24.51■■□□□ 1.51
ZNF250-207ENST00000529780 LAMC3Q9Y6N6 1575 aa24.4■■□□□ 1.5
ZNF250-207ENST00000529780 ERCC6Q03468 1493 aa24.38■■□□□ 1.49
ZNF250-207ENST00000529780 CADPSQ9ULU8 1353 aa24.3■■□□□ 1.48
ZNF250-207ENST00000529780 KIF21AQ7Z4S6 1674 aa24.25■■□□□ 1.47
ZNF250-207ENST00000529780 CCDC88BA6NC98 1476 aa24.22■■□□□ 1.47
ZNF250-207ENST00000529780 PDS5BQ9NTI5 1447 aa24.21■■□□□ 1.47
ZNF250-207ENST00000529780 CFTRP13569 1480 aa24.16■■□□□ 1.46
ZNF250-207ENST00000529780 THOC2Q8NI27 1593 aaKnown RBP24.14■■□□□ 1.45
ZNF250-207ENST00000529780 SUPT5HO00267 1087 aaKnown RBP24.13■■□□□ 1.45
ZNF250-207ENST00000529780 CUX2O14529 1486 aa24.11■■□□□ 1.45
ZNF250-207ENST00000529780 FANCD2Q9BXW9 1451 aa24.06■■□□□ 1.44
ZNF250-207ENST00000529780 PRDM2Q13029 1718 aa24.04■■□□□ 1.44
ZNF250-207ENST00000529780 CEP164Q9UPV0 1460 aa24.02■■□□□ 1.44
ZNF250-207ENST00000529780 MRC2Q9UBG0 1479 aa24■■□□□ 1.43
ZNF250-207ENST00000529780 WDR62O43379 1518 aa23.92■■□□□ 1.42
ZNF250-207ENST00000529780 URB2Q14146 1524 aaKnown RBP23.84■■□□□ 1.41
ZNF250-207ENST00000529780 TOPBP1Q92547 1522 aa23.68■■□□□ 1.38
ZNF250-207ENST00000529780 DNMBPQ6XZF7 1577 aa23.65■■□□□ 1.38
ZNF250-207ENST00000529780 ABCC8Q09428 1581 aa23.61■■□□□ 1.37
ZNF250-207ENST00000529780 IFT140Q96RY7 1462 aa23.51■■□□□ 1.35
ZNF250-207ENST00000529780 CUX1P39880 1505 aa23.51■■□□□ 1.35
ZNF250-207ENST00000529780 AEBP2Q6ZN18 517 aaPredicted RBP23.47■■□□□ 1.35
ZNF250-207ENST00000529780 POLA1P09884 1462 aaPredicted RBP23.47■■□□□ 1.35
ZNF250-207ENST00000529780 ZNF608Q9ULD9 1512 aaPredicted RBP23.45■■□□□ 1.34
ZNF250-207ENST00000529780 TARBP1Q13395 1621 aaKnown RBP23.44■■□□□ 1.34
ZNF250-207ENST00000529780 FGD5Q6ZNL6 1462 aa23.43■■□□□ 1.34
ZNF250-207ENST00000529780 DNAJC5Q9H3Z4 198 aa23.4■■□□□ 1.34
ZNF250-207ENST00000529780 RAD54L2Q9Y4B4 1467 aa23.4■■□□□ 1.34
ZNF250-207ENST00000529780 EIF4G3O43432 1585 aaKnown RBP23.36■■□□□ 1.33
ZNF250-207ENST00000529780 SOGA1O94964 1423 aa23.36■■□□□ 1.33
ZNF250-207ENST00000529780 WRNQ14191 1432 aaPredicted RBP eCLIP23.32■■□□□ 1.32
ZNF250-207ENST00000529780 SYNJ1O43426 1573 aa23.31■■□□□ 1.32
ZNF250-207ENST00000529780 AQRO60306 1485 aaKnown RBP eCLIP23.3■■□□□ 1.325e-7■■■■■ 45.6
ZNF250-207ENST00000529780 BIVM-ERCC5R4GMW8 1640 aa23.3■■□□□ 1.32
ZNF250-207ENST00000529780 TOP2BQ02880 1626 aa23.29■■□□□ 1.32
ZNF250-207ENST00000529780 WDR97A6NE52 1622 aa23.26■■□□□ 1.31
ZNF250-207ENST00000529780 TDRD9Q8NDG6 1382 aaKnown RBP23.26■■□□□ 1.31
ZNF250-207ENST00000529780 ABCA10Q8WWZ4 1543 aa23.17■■□□□ 1.3
ZNF250-207ENST00000529780 PBRM1Q86U86 1689 aa23.11■■□□□ 1.29
ZNF250-207ENST00000529780 ABCA5Q8WWZ7 1642 aa23.11■■□□□ 1.29
ZNF250-207ENST00000529780 CHD1O14646 1710 aa23.11■■□□□ 1.29
ZNF250-207ENST00000529780 OSCARQ8IYS5 282 aa23.1■■□□□ 1.29
ZNF250-207ENST00000529780 GAPVD1Q14C86 1478 aa23.1■■□□□ 1.29
ZNF250-207ENST00000529780 SNAPC4Q5SXM2 1469 aa23.1■■□□□ 1.29
ZNF250-207ENST00000529780 GRIN2BQ13224 1484 aa23.09■■□□□ 1.29
ZNF250-207ENST00000529780 FBLN2P98095 1184 aa23.03■■□□□ 1.28
ZNF250-207ENST00000529780 MAGI1Q96QZ7 1491 aaPredicted RBP23.02■■□□□ 1.28
ZNF250-207ENST00000529780 SYNJ2O15056 1496 aa22.94■■□□□ 1.26
ZNF250-207ENST00000529780 CHMP7Q8WUX9 453 aaPredicted RBP22.93■■□□□ 1.26
ZNF250-207ENST00000529780 ADAMTS12P58397 1594 aa22.89■■□□□ 1.26
ZNF250-207ENST00000529780 ERICH3Q5RHP9 1530 aa22.88■■□□□ 1.25
ZNF250-207ENST00000529780 FHAD1B1AJZ9 1412 aa22.82■■□□□ 1.24
ZNF250-207ENST00000529780 KIF27Q86VH2 1401 aa22.82■■□□□ 1.24
ZNF250-207ENST00000529780 RIMBP3CA6NJZ7 1639 aa22.81■■□□□ 1.24
ZNF250-207ENST00000529780 RIMBP3BA6NNM3 1639 aa22.81■■□□□ 1.24
ZNF250-207ENST00000529780 RIMBP3Q9UFD9 1639 aa22.81■■□□□ 1.24
ZNF250-207ENST00000529780 GRIN2AQ12879 1464 aa22.8■■□□□ 1.24
ZNF250-207ENST00000529780 CLASP1Q7Z460 1538 aa22.8■■□□□ 1.24
ZNF250-207ENST00000529780 ARHGEF11O15085 1522 aa22.77■■□□□ 1.24
ZNF250-207ENST00000529780 TRIM41Q8WV44 630 aa22.75■■□□□ 1.23
ZNF250-207ENST00000529780 IGF1RP08069 1367 aa22.74■■□□□ 1.23
ZNF250-207ENST00000529780 CEP170Q5SW79 1584 aa22.72■■□□□ 1.23
ZNF250-207ENST00000529780 CUL7Q14999 1698 aa22.7■■□□□ 1.22
ZNF250-207ENST00000529780 NUP160Q12769 1436 aa22.69■■□□□ 1.22
ZNF250-207ENST00000529780 RUSC2Q8N2Y8 1516 aa22.67■■□□□ 1.22
ZNF250-207ENST00000529780 CHIC1Q5VXU3 224 aa22.66■■□□□ 1.22
ZNF250-207ENST00000529780 CARMIL1Q5VZK9 1371 aa22.61■■□□□ 1.21
ZNF250-207ENST00000529780 ARAP1Q96P48 1450 aa22.6■■□□□ 1.21
ZNF250-207ENST00000529780 CYB5RLQ6IPT4 315 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms