RNA–Protein interactions for RNA: ENST00000529725.1

SIPA1-205, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 2

Gene SIPA1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-205ENST00000529725 NISCHQ9Y2I1 1504 aa39.24■■■■□ 3.87
SIPA1-205ENST00000529725 CCDC180Q9P1Z9 1646 aa34.92■■■■□ 3.18
SIPA1-205ENST00000529725 ABCC9O60706 1549 aa34.49■■■■□ 3.11
SIPA1-205ENST00000529725 RB1CC1Q8TDY2 1594 aa33.03■■■□□ 2.88
SIPA1-205ENST00000529725 DCAF8L2P0C7V8 631 aa33.01■■■□□ 2.87
SIPA1-205ENST00000529725 NACADO15069 1562 aa32.93■■■□□ 2.86
SIPA1-205ENST00000529725 MYO15BQ96JP2 1530 aa32.64■■■□□ 2.82
SIPA1-205ENST00000529725 ZCCHC6Q5VYS8 1495 aaKnown RBP32.61■■■□□ 2.81
SIPA1-205ENST00000529725 DCAF1Q9Y4B6 1507 aa32.42■■■□□ 2.78
SIPA1-205ENST00000529725 PABPN1Q86U42 306 aaKnown RBP eCLIP32.25■■■□□ 2.75
SIPA1-205ENST00000529725 UNC13AQ9UPW8 1703 aa32.22■■■□□ 2.75
SIPA1-205ENST00000529725 BICRAQ9NZM4 1560 aa32.03■■■□□ 2.72
SIPA1-205ENST00000529725 DNAJC5BQ9UF47 199 aa31.92■■■□□ 2.7
SIPA1-205ENST00000529725 SCRIBQ14160 1630 aa31.9■■■□□ 2.7
SIPA1-205ENST00000529725 SHROOM4Q9ULL8 1493 aa31.64■■■□□ 2.66
SIPA1-205ENST00000529725 EIF4G1Q04637 1599 aaKnown RBP31.22■■■□□ 2.59
SIPA1-205ENST00000529725 CC2D2AQ9P2K1 1620 aa31.15■■■□□ 2.58
SIPA1-205ENST00000529725 CECR2Q9BXF3 1484 aa31.01■■■□□ 2.55
SIPA1-205ENST00000529725 SMARCA4P51532 1647 aa30.47■■■□□ 2.47
SIPA1-205ENST00000529725 NCAPD3P42695 1498 aa30.42■■■□□ 2.46
SIPA1-205ENST00000529725 BAZ1AQ9NRL2 1556 aaPredicted RBP30.41■■■□□ 2.46
SIPA1-205ENST00000529725 ATAD2BQ9ULI0 1458 aa30.4■■■□□ 2.46
SIPA1-205ENST00000529725 SMARCA2P51531 1590 aa30.32■■■□□ 2.45
SIPA1-205ENST00000529725 MROH2BQ7Z745 1585 aa30.24■■■□□ 2.43
SIPA1-205ENST00000529725 HMGXB3Q12766 1538 aa30.2■■■□□ 2.42
SIPA1-205ENST00000529725 PEG3Q9GZU2 1588 aa30.15■■■□□ 2.42
SIPA1-205ENST00000529725 BAZ1BQ9UIG0 1483 aaKnown RBP30.13■■■□□ 2.41
SIPA1-205ENST00000529725 WIZO95785 1651 aa29.89■■■□□ 2.38
SIPA1-205ENST00000529725 RSF1Q96T23 1441 aaPredicted RBP29.83■■■□□ 2.37
SIPA1-205ENST00000529725 NESP48681 1621 aa29.77■■■□□ 2.36
SIPA1-205ENST00000529725 ERCC6Q03468 1493 aa29.74■■■□□ 2.35
SIPA1-205ENST00000529725 LAMC3Q9Y6N6 1575 aa29.62■■■□□ 2.33
SIPA1-205ENST00000529725 TOP2AP11388 1531 aaKnown RBP29.55■■■□□ 2.32
SIPA1-205ENST00000529725 CADPSQ9ULU8 1353 aa29.54■■■□□ 2.32
SIPA1-205ENST00000529725 CUX2O14529 1486 aa29.48■■■□□ 2.31
SIPA1-205ENST00000529725 PDS5BQ9NTI5 1447 aa29.48■■■□□ 2.31
SIPA1-205ENST00000529725 KIF21AQ7Z4S6 1674 aa29.35■■■□□ 2.29
SIPA1-205ENST00000529725 THOC2Q8NI27 1593 aaKnown RBP29.3■■■□□ 2.28
SIPA1-205ENST00000529725 CFTRP13569 1480 aa29.29■■■□□ 2.28
SIPA1-205ENST00000529725 CCDC88BA6NC98 1476 aa29.25■■■□□ 2.27
SIPA1-205ENST00000529725 FANCD2Q9BXW9 1451 aa29.18■■■□□ 2.26
SIPA1-205ENST00000529725 MRC2Q9UBG0 1479 aa29.17■■■□□ 2.26
SIPA1-205ENST00000529725 CEP164Q9UPV0 1460 aa29.17■■■□□ 2.26
SIPA1-205ENST00000529725 WDR62O43379 1518 aa29.05■■■□□ 2.24
SIPA1-205ENST00000529725 SUPT5HO00267 1087 aaKnown RBP28.98■■■□□ 2.23
SIPA1-205ENST00000529725 PRDM2Q13029 1718 aa28.95■■■□□ 2.23
SIPA1-205ENST00000529725 DNAJC5Q9H3Z4 198 aa28.92■■■□□ 2.22
SIPA1-205ENST00000529725 URB2Q14146 1524 aaKnown RBP28.9■■■□□ 2.22
SIPA1-205ENST00000529725 TOPBP1Q92547 1522 aa28.68■■■□□ 2.18
SIPA1-205ENST00000529725 ABCC8Q09428 1581 aa28.67■■■□□ 2.18
SIPA1-205ENST00000529725 DNMBPQ6XZF7 1577 aa28.61■■■□□ 2.17
SIPA1-205ENST00000529725 IFT140Q96RY7 1462 aa28.56■■■□□ 2.16
SIPA1-205ENST00000529725 ZNF608Q9ULD9 1512 aaPredicted RBP28.47■■■□□ 2.15
SIPA1-205ENST00000529725 POLA1P09884 1462 aaPredicted RBP28.42■■■□□ 2.14
SIPA1-205ENST00000529725 CUX1P39880 1505 aa28.38■■■□□ 2.13
SIPA1-205ENST00000529725 TARBP1Q13395 1621 aaKnown RBP28.36■■■□□ 2.13
SIPA1-205ENST00000529725 SOGA1O94964 1423 aa28.35■■■□□ 2.13
SIPA1-205ENST00000529725 RAD54L2Q9Y4B4 1467 aa28.34■■■□□ 2.13
SIPA1-205ENST00000529725 FGD5Q6ZNL6 1462 aa28.33■■■□□ 2.13
SIPA1-205ENST00000529725 AQRO60306 1485 aaKnown RBP eCLIP28.3■■■□□ 2.12
SIPA1-205ENST00000529725 OSCARQ8IYS5 282 aa28.3■■■□□ 2.12
SIPA1-205ENST00000529725 EIF4G3O43432 1585 aaKnown RBP28.29■■■□□ 2.12
SIPA1-205ENST00000529725 TDRD9Q8NDG6 1382 aaKnown RBP28.23■■■□□ 2.11
SIPA1-205ENST00000529725 WRNQ14191 1432 aaPredicted RBP eCLIP28.13■■■□□ 2.09
SIPA1-205ENST00000529725 WDR97A6NE52 1622 aa28.1■■■□□ 2.09
SIPA1-205ENST00000529725 FBLN2P98095 1184 aa28.06■■■□□ 2.08
SIPA1-205ENST00000529725 TOP2BQ02880 1626 aa28.05■■■□□ 2.08
SIPA1-205ENST00000529725 SYNJ1O43426 1573 aa28.04■■■□□ 2.08
SIPA1-205ENST00000529725 BIVM-ERCC5R4GMW8 1640 aa28.03■■■□□ 2.08
SIPA1-205ENST00000529725 ABCA10Q8WWZ4 1543 aa28.02■■■□□ 2.08
SIPA1-205ENST00000529725 GRIN2BQ13224 1484 aa28.02■■■□□ 2.08
SIPA1-205ENST00000529725 SNAPC4Q5SXM2 1469 aa28.01■■■□□ 2.07
SIPA1-205ENST00000529725 GAPVD1Q14C86 1478 aa27.99■■■□□ 2.07
SIPA1-205ENST00000529725 CHD1O14646 1710 aa27.97■■■□□ 2.07
SIPA1-205ENST00000529725 MAGI1Q96QZ7 1491 aaPredicted RBP27.94■■■□□ 2.06
SIPA1-205ENST00000529725 CHMP7Q8WUX9 453 aaPredicted RBP27.93■■■□□ 2.06
SIPA1-205ENST00000529725 ABCA5Q8WWZ7 1642 aa27.9■■■□□ 2.06
SIPA1-205ENST00000529725 TRIM41Q8WV44 630 aa27.9■■■□□ 2.06
SIPA1-205ENST00000529725 PBRM1Q86U86 1689 aa27.87■■■□□ 2.05
SIPA1-205ENST00000529725 SYNJ2O15056 1496 aa27.85■■■□□ 2.05
SIPA1-205ENST00000529725 RIMBP3CA6NJZ7 1639 aa27.78■■■□□ 2.04
SIPA1-205ENST00000529725 RIMBP3BA6NNM3 1639 aa27.78■■■□□ 2.04
SIPA1-205ENST00000529725 RIMBP3Q9UFD9 1639 aa27.78■■■□□ 2.04
SIPA1-205ENST00000529725 ARHGEF11O15085 1522 aa27.77■■■□□ 2.04
SIPA1-205ENST00000529725 ERICH3Q5RHP9 1530 aa27.68■■■□□ 2.02
SIPA1-205ENST00000529725 CLASP1Q7Z460 1538 aa27.68■■■□□ 2.02
SIPA1-205ENST00000529725 ADAMTS12P58397 1594 aa27.66■■■□□ 2.02
SIPA1-205ENST00000529725 FHAD1B1AJZ9 1412 aa27.66■■■□□ 2.02
SIPA1-205ENST00000529725 GRIN2AQ12879 1464 aa27.64■■■□□ 2.01
SIPA1-205ENST00000529725 CYB5RLQ6IPT4 315 aa27.61■■■□□ 2.01
SIPA1-205ENST00000529725 KIF27Q86VH2 1401 aa27.57■■■□□ 2
SIPA1-205ENST00000529725 ARAP1Q96P48 1450 aa27.54■■■□□ 2
SIPA1-205ENST00000529725 NUP160Q12769 1436 aa27.52■■■□□ 2
SIPA1-205ENST00000529725 IGF1RP08069 1367 aa27.51■■□□□ 1.99
SIPA1-205ENST00000529725 CEP170Q5SW79 1584 aa27.5■■□□□ 1.99
SIPA1-205ENST00000529725 CUL7Q14999 1698 aa27.36■■□□□ 1.97
SIPA1-205ENST00000529725 CARMIL1Q5VZK9 1371 aa27.34■■□□□ 1.97
SIPA1-205ENST00000529725 JPH4Q96JJ6 628 aa27.32■■□□□ 1.96
SIPA1-205ENST00000529725 ERCC6L2Q5T890 1561 aa27.31■■□□□ 1.96
SIPA1-205ENST00000529725 SHROOM2Q13796 1616 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms