RNA–Protein interactions for RNA: ENST00000529724.1

PPP1CA-206, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2

Gene PPP1CA, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-206ENST00000529724 NISCHQ9Y2I1 1504 aa27.61■■■□□ 2.01
PPP1CA-206ENST00000529724 ABCC9O60706 1549 aa26.01■■□□□ 1.75
PPP1CA-206ENST00000529724 DNAJC5BQ9UF47 199 aa25.26■■□□□ 1.63
PPP1CA-206ENST00000529724 CCDC180Q9P1Z9 1646 aa25.12■■□□□ 1.61
PPP1CA-206ENST00000529724 RB1CC1Q8TDY2 1594 aa24.33■■□□□ 1.49
PPP1CA-206ENST00000529724 PABPN1Q86U42 306 aaKnown RBP eCLIP24.08■■□□□ 1.45
PPP1CA-206ENST00000529724 NACADO15069 1562 aa23.97■■□□□ 1.43
PPP1CA-206ENST00000529724 DNAJC5Q9H3Z4 198 aa23.8■■□□□ 1.4
PPP1CA-206ENST00000529724 UNC13AQ9UPW8 1703 aa23.8■■□□□ 1.4
PPP1CA-206ENST00000529724 BICRAQ9NZM4 1560 aa23.74■■□□□ 1.39
PPP1CA-206ENST00000529724 DCAF8L2P0C7V8 631 aa23.58■■□□□ 1.37
PPP1CA-206ENST00000529724 CECR2Q9BXF3 1484 aa23.53■■□□□ 1.36
PPP1CA-206ENST00000529724 CC2D2AQ9P2K1 1620 aa23.44■■□□□ 1.34
PPP1CA-206ENST00000529724 MYO15BQ96JP2 1530 aa23.38■■□□□ 1.33
PPP1CA-206ENST00000529724 SHROOM4Q9ULL8 1493 aa23.28■■□□□ 1.32
PPP1CA-206ENST00000529724 EIF4G1Q04637 1599 aaKnown RBP23.18■■□□□ 1.3
PPP1CA-206ENST00000529724 SCRIBQ14160 1630 aa22.84■■□□□ 1.25
PPP1CA-206ENST00000529724 CUX2O14529 1486 aa22.78■■□□□ 1.24
PPP1CA-206ENST00000529724 DCAF1Q9Y4B6 1507 aa22.75■■□□□ 1.23
PPP1CA-206ENST00000529724 ZCCHC6Q5VYS8 1495 aaKnown RBP22.71■■□□□ 1.23
PPP1CA-206ENST00000529724 ERCC6Q03468 1493 aa22.47■■□□□ 1.19
PPP1CA-206ENST00000529724 TRIM41Q8WV44 630 aa22.32■■□□□ 1.16
PPP1CA-206ENST00000529724 NCAPD3P42695 1498 aa22.18■■□□□ 1.14
PPP1CA-206ENST00000529724 NESP48681 1621 aa22.12■■□□□ 1.13
PPP1CA-206ENST00000529724 THOC2Q8NI27 1593 aaKnown RBP22.07■■□□□ 1.12
PPP1CA-206ENST00000529724 ATAD2BQ9ULI0 1458 aa21.98■■□□□ 1.11
PPP1CA-206ENST00000529724 HMGXB3Q12766 1538 aa21.91■■□□□ 1.1
PPP1CA-206ENST00000529724 SMARCA2P51531 1590 aa21.85■■□□□ 1.09
PPP1CA-206ENST00000529724 LAMC3Q9Y6N6 1575 aa21.77■■□□□ 1.08
PPP1CA-206ENST00000529724 KIF21AQ7Z4S6 1674 aa21.75■■□□□ 1.07
PPP1CA-206ENST00000529724 SMARCA4P51532 1647 aa21.71■■□□□ 1.07
PPP1CA-206ENST00000529724 BAZ1BQ9UIG0 1483 aaKnown RBP21.68■■□□□ 1.06
PPP1CA-206ENST00000529724 PDS5BQ9NTI5 1447 aa21.67■■□□□ 1.06
PPP1CA-206ENST00000529724 BAZ1AQ9NRL2 1556 aaPredicted RBP21.63■■□□□ 1.05
PPP1CA-206ENST00000529724 MRC2Q9UBG0 1479 aa21.57■■□□□ 1.04
PPP1CA-206ENST00000529724 WDR62O43379 1518 aa21.55■■□□□ 1.04
PPP1CA-206ENST00000529724 OSCARQ8IYS5 282 aa21.55■■□□□ 1.04
PPP1CA-206ENST00000529724 PEG3Q9GZU2 1588 aa21.53■■□□□ 1.04
PPP1CA-206ENST00000529724 CADPSQ9ULU8 1353 aa21.44■■□□□ 1.02
PPP1CA-206ENST00000529724 RIMBP3CA6NJZ7 1639 aa21.41■■□□□ 1.02
PPP1CA-206ENST00000529724 RIMBP3BA6NNM3 1639 aa21.41■■□□□ 1.02
PPP1CA-206ENST00000529724 RIMBP3Q9UFD9 1639 aa21.41■■□□□ 1.02
PPP1CA-206ENST00000529724 MROH2BQ7Z745 1585 aa21.28■■□□□ 1
PPP1CA-206ENST00000529724 CEP164Q9UPV0 1460 aa21.28■■□□□ 1
PPP1CA-206ENST00000529724 ARHGEF11O15085 1522 aa21.26■□□□□ 0.99
PPP1CA-206ENST00000529724 FANCD2Q9BXW9 1451 aa21.2■□□□□ 0.98
PPP1CA-206ENST00000529724 AEBP2Q6ZN18 517 aaPredicted RBP21.14■□□□□ 0.97
PPP1CA-206ENST00000529724 TRHP20396 242 aaPredicted RBP21.13■□□□□ 0.97
PPP1CA-206ENST00000529724 CYB5RLQ6IPT4 315 aa21.12■□□□□ 0.97
PPP1CA-206ENST00000529724 URB2Q14146 1524 aaKnown RBP21.11■□□□□ 0.97
PPP1CA-206ENST00000529724 CFTRP13569 1480 aa21.02■□□□□ 0.96
PPP1CA-206ENST00000529724 ARAP1Q96P48 1450 aa21.01■□□□□ 0.95
PPP1CA-206ENST00000529724 ZNF608Q9ULD9 1512 aaPredicted RBP20.99■□□□□ 0.95
PPP1CA-206ENST00000529724 WIZO95785 1651 aa20.95■□□□□ 0.94
PPP1CA-206ENST00000529724 IFT140Q96RY7 1462 aa20.9■□□□□ 0.94
PPP1CA-206ENST00000529724 RSF1Q96T23 1441 aaPredicted RBP20.83■□□□□ 0.93
PPP1CA-206ENST00000529724 EIF4G3O43432 1585 aaKnown RBP20.8■□□□□ 0.92
PPP1CA-206ENST00000529724 CHD1O14646 1710 aa20.79■□□□□ 0.92
PPP1CA-206ENST00000529724 TOPBP1Q92547 1522 aa20.71■□□□□ 0.91
PPP1CA-206ENST00000529724 AQRO60306 1485 aaKnown RBP eCLIP20.67■□□□□ 0.93e-12■■■■■ 48.9
PPP1CA-206ENST00000529724 PRDM2Q13029 1718 aa20.66■□□□□ 0.9
PPP1CA-206ENST00000529724 FBLN2P98095 1184 aa20.64■□□□□ 0.89
PPP1CA-206ENST00000529724 TOP2AP11388 1531 aaKnown RBP20.63■□□□□ 0.89
PPP1CA-206ENST00000529724 TARBP1Q13395 1621 aaKnown RBP20.6■□□□□ 0.89
PPP1CA-206ENST00000529724 CLASP1Q7Z460 1538 aa20.58■□□□□ 0.89
PPP1CA-206ENST00000529724 ABCC8Q09428 1581 aa20.55■□□□□ 0.88
PPP1CA-206ENST00000529724 DNMBPQ6XZF7 1577 aa20.53■□□□□ 0.88
PPP1CA-206ENST00000529724 ILDR1Q86SU0 546 aaPredicted RBP20.46■□□□□ 0.87
PPP1CA-206ENST00000529724 POLA1P09884 1462 aaPredicted RBP20.44■□□□□ 0.86
PPP1CA-206ENST00000529724 SNAPC4Q5SXM2 1469 aa20.43■□□□□ 0.86
PPP1CA-206ENST00000529724 SYNJ1O43426 1573 aa20.43■□□□□ 0.86
PPP1CA-206ENST00000529724 CCDC88BA6NC98 1476 aa20.41■□□□□ 0.86
PPP1CA-206ENST00000529724 GAPVD1Q14C86 1478 aa20.41■□□□□ 0.86
PPP1CA-206ENST00000529724 TDRD9Q8NDG6 1382 aaKnown RBP20.4■□□□□ 0.86
PPP1CA-206ENST00000529724 RAD54L2Q9Y4B4 1467 aa20.39■□□□□ 0.85
PPP1CA-206ENST00000529724 CHMP7Q8WUX9 453 aaPredicted RBP20.35■□□□□ 0.85
PPP1CA-206ENST00000529724 MAGI1Q96QZ7 1491 aaPredicted RBP20.32■□□□□ 0.84
PPP1CA-206ENST00000529724 SOGA1O94964 1423 aa20.3■□□□□ 0.84
PPP1CA-206ENST00000529724 WDR97A6NE52 1622 aa20.28■□□□□ 0.84
PPP1CA-206ENST00000529724 SYNJ2O15056 1496 aa20.28■□□□□ 0.84
PPP1CA-206ENST00000529724 GRIN2BQ13224 1484 aa20.24■□□□□ 0.83
PPP1CA-206ENST00000529724 ERCC6L2Q5T890 1561 aa20.21■□□□□ 0.83
PPP1CA-206ENST00000529724 KIF13AQ9H1H9 1805 aa20.19■□□□□ 0.82
PPP1CA-206ENST00000529724 KDM4FA0A1W2PPD8 638 aa20.19■□□□□ 0.82
PPP1CA-206ENST00000529724 FGD5Q6ZNL6 1462 aa20.18■□□□□ 0.82
PPP1CA-206ENST00000529724 PBRM1Q86U86 1689 aa20.07■□□□□ 0.8
PPP1CA-206ENST00000529724 CEP170Q5SW79 1584 aa20.06■□□□□ 0.8
PPP1CA-206ENST00000529724 CUX1P39880 1505 aa20.04■□□□□ 0.8
PPP1CA-206ENST00000529724 GRIN2AQ12879 1464 aa19.99■□□□□ 0.79
PPP1CA-206ENST00000529724 NUP160Q12769 1436 aa19.98■□□□□ 0.79
PPP1CA-206ENST00000529724 ABCC10Q5T3U5 1492 aa19.98■□□□□ 0.79
PPP1CA-206ENST00000529724 SHROOM2Q13796 1616 aa19.98■□□□□ 0.79
PPP1CA-206ENST00000529724 FAM69CQ0P6D2 419 aa19.96■□□□□ 0.79
PPP1CA-206ENST00000529724 ABCA5Q8WWZ7 1642 aa19.95■□□□□ 0.78
PPP1CA-206ENST00000529724 KDM6BO15054 1643 aa19.92■□□□□ 0.78
PPP1CA-206ENST00000529724 DIP2BQ9P265 1576 aa19.91■□□□□ 0.78
PPP1CA-206ENST00000529724 ABCA10Q8WWZ4 1543 aa19.9■□□□□ 0.78
PPP1CA-206ENST00000529724 ADAMTS12P58397 1594 aa19.87■□□□□ 0.77
PPP1CA-206ENST00000529724 MAPKBP1O60336 1514 aa19.86■□□□□ 0.77
PPP1CA-206ENST00000529724 PRG4Q92954 1404 aaPredicted RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 312.4 ms