RNA–Protein interactions for RNA: ENST00000529650.1

PRMT1-213, Transcript of protein arginine methyltransferase 1, humanhuman

TSL 2

Gene PRMT1, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRMT1-213ENST00000529650 NISCHQ9Y2I1 1504 aa55.52■■■■■ 6.48
PRMT1-213ENST00000529650 CCDC180Q9P1Z9 1646 aa50■■■■■ 5.59
PRMT1-213ENST00000529650 ABCC9O60706 1549 aa49.9■■■■■ 5.58
PRMT1-213ENST00000529650 RB1CC1Q8TDY2 1594 aa47.54■■■■■ 5.2
PRMT1-213ENST00000529650 NACADO15069 1562 aa47.16■■■■■ 5.14
PRMT1-213ENST00000529650 DCAF8L2P0C7V8 631 aa46.74■■■■■ 5.07
PRMT1-213ENST00000529650 DNAJC5BQ9UF47 199 aa46.7■■■■■ 5.07
PRMT1-213ENST00000529650 UNC13AQ9UPW8 1703 aa46.6■■■■■ 5.05
PRMT1-213ENST00000529650 MYO15BQ96JP2 1530 aa46.48■■■■■ 5.03
PRMT1-213ENST00000529650 PABPN1Q86U42 306 aaKnown RBP eCLIP46.33■■■■■ 5.01
PRMT1-213ENST00000529650 BICRAQ9NZM4 1560 aa46.14■■■■■ 4.98
PRMT1-213ENST00000529650 ZCCHC6Q5VYS8 1495 aaKnown RBP46.05■■■■■ 4.96
PRMT1-213ENST00000529650 DCAF1Q9Y4B6 1507 aa45.87■■■■■ 4.93
PRMT1-213ENST00000529650 SHROOM4Q9ULL8 1493 aa45.52■■■■■ 4.88
PRMT1-213ENST00000529650 SCRIBQ14160 1630 aa45.51■■■■■ 4.88
PRMT1-213ENST00000529650 CC2D2AQ9P2K1 1620 aa45.13■■■■■ 4.82
PRMT1-213ENST00000529650 EIF4G1Q04637 1599 aaKnown RBP45.02■■■■■ 4.8
PRMT1-213ENST00000529650 CECR2Q9BXF3 1484 aa44.94■■■■■ 4.78
PRMT1-213ENST00000529650 NCAPD3P42695 1498 aa43.46■■■■■ 4.55
PRMT1-213ENST00000529650 SMARCA4P51532 1647 aa43.4■■■■■ 4.54
PRMT1-213ENST00000529650 ATAD2BQ9ULI0 1458 aa43.36■■■■■ 4.53
PRMT1-213ENST00000529650 SMARCA2P51531 1590 aa43.29■■■■■ 4.52
PRMT1-213ENST00000529650 HMGXB3Q12766 1538 aa43.25■■■■■ 4.51
PRMT1-213ENST00000529650 BAZ1AQ9NRL2 1556 aaPredicted RBP43.15■■■■■ 4.5
PRMT1-213ENST00000529650 ERCC6Q03468 1493 aa43.1■■■■■ 4.49
PRMT1-213ENST00000529650 CUX2O14529 1486 aa43.04■■■■■ 4.48
PRMT1-213ENST00000529650 BAZ1BQ9UIG0 1483 aaKnown RBP42.98■■■■■ 4.47
PRMT1-213ENST00000529650 PEG3Q9GZU2 1588 aa42.95■■■■■ 4.47
PRMT1-213ENST00000529650 DNAJC5Q9H3Z4 198 aa42.93■■■■■ 4.46
PRMT1-213ENST00000529650 NESP48681 1621 aa42.86■■■■■ 4.45
PRMT1-213ENST00000529650 MROH2BQ7Z745 1585 aa42.79■■■■■ 4.44
PRMT1-213ENST00000529650 LAMC3Q9Y6N6 1575 aa42.6■■■■■ 4.41
PRMT1-213ENST00000529650 THOC2Q8NI27 1593 aaKnown RBP42.53■■■■■ 4.4
PRMT1-213ENST00000529650 KIF21AQ7Z4S6 1674 aa42.44■■■■■ 4.38
PRMT1-213ENST00000529650 WIZO95785 1651 aa42.34■■■■■ 4.37
PRMT1-213ENST00000529650 PDS5BQ9NTI5 1447 aa42.27■■■■■ 4.36
PRMT1-213ENST00000529650 CADPSQ9ULU8 1353 aa42.13■■■■■ 4.33
PRMT1-213ENST00000529650 MRC2Q9UBG0 1479 aa41.96■■■■■ 4.31
PRMT1-213ENST00000529650 WDR62O43379 1518 aa41.89■■■■■ 4.3
PRMT1-213ENST00000529650 RSF1Q96T23 1441 aaPredicted RBP41.83■■■■■ 4.29
PRMT1-213ENST00000529650 CEP164Q9UPV0 1460 aa41.79■■■■■ 4.28
PRMT1-213ENST00000529650 TOP2AP11388 1531 aaKnown RBP41.79■■■■■ 4.28
PRMT1-213ENST00000529650 FANCD2Q9BXW9 1451 aa41.71■■■■■ 4.27
PRMT1-213ENST00000529650 CFTRP13569 1480 aa41.67■■■■■ 4.26
PRMT1-213ENST00000529650 PRDM2Q13029 1718 aa41.52■■■■■ 4.24
PRMT1-213ENST00000529650 URB2Q14146 1524 aaKnown RBP41.39■■■■■ 4.22
PRMT1-213ENST00000529650 CCDC88BA6NC98 1476 aa41.22■■■■■ 4.19
PRMT1-213ENST00000529650 TRIM41Q8WV44 630 aa41.07■■■■■ 4.17
PRMT1-213ENST00000529650 TOPBP1Q92547 1522 aa40.94■■■■■ 4.14
PRMT1-213ENST00000529650 OSCARQ8IYS5 282 aa40.93■■■■■ 4.14
PRMT1-213ENST00000529650 IFT140Q96RY7 1462 aa40.93■■■■■ 4.14
PRMT1-213ENST00000529650 ZNF608Q9ULD9 1512 aaPredicted RBP40.87■■■■■ 4.13
PRMT1-213ENST00000529650 DNMBPQ6XZF7 1577 aa40.82■■■■■ 4.13
PRMT1-213ENST00000529650 ABCC8Q09428 1581 aa40.82■■■■■ 4.12
PRMT1-213ENST00000529650 EIF4G3O43432 1585 aaKnown RBP40.76■■■■■ 4.12
PRMT1-213ENST00000529650 TARBP1Q13395 1621 aaKnown RBP40.62■■■■■ 4.09
PRMT1-213ENST00000529650 RIMBP3CA6NJZ7 1639 aa40.6■■■■■ 4.09
PRMT1-213ENST00000529650 RIMBP3BA6NNM3 1639 aa40.6■■■■■ 4.09
PRMT1-213ENST00000529650 RIMBP3Q9UFD9 1639 aa40.6■■■■■ 4.09
PRMT1-213ENST00000529650 POLA1P09884 1462 aaPredicted RBP40.51■■■■■ 4.08
PRMT1-213ENST00000529650 CHD1O14646 1710 aa40.51■■■■■ 4.08
PRMT1-213ENST00000529650 AQRO60306 1485 aaKnown RBP eCLIP40.45■■■■■ 4.07
PRMT1-213ENST00000529650 ARHGEF11O15085 1522 aa40.42■■■■■ 4.06
PRMT1-213ENST00000529650 RAD54L2Q9Y4B4 1467 aa40.33■■■■■ 4.05
PRMT1-213ENST00000529650 FGD5Q6ZNL6 1462 aa40.26■■■■■ 4.04
PRMT1-213ENST00000529650 SOGA1O94964 1423 aa40.25■■■■■ 4.03
PRMT1-213ENST00000529650 WDR97A6NE52 1622 aa40.24■■■■■ 4.03
PRMT1-213ENST00000529650 CUX1P39880 1505 aa40.22■■■■■ 4.03
PRMT1-213ENST00000529650 TDRD9Q8NDG6 1382 aaKnown RBP40.18■■■■■ 4.02
PRMT1-213ENST00000529650 FBLN2P98095 1184 aa40.15■■■■■ 4.02
PRMT1-213ENST00000529650 SNAPC4Q5SXM2 1469 aa40.11■■■■■ 4.01
PRMT1-213ENST00000529650 ARAP1Q96P48 1450 aa40.02■■■■■ 4
PRMT1-213ENST00000529650 MAGI1Q96QZ7 1491 aaPredicted RBP40■■■■□ 3.99
PRMT1-213ENST00000529650 CYB5RLQ6IPT4 315 aa39.99■■■■□ 3.99
PRMT1-213ENST00000529650 PBRM1Q86U86 1689 aa39.98■■■■□ 3.99
PRMT1-213ENST00000529650 GRIN2BQ13224 1484 aa39.97■■■■□ 3.99
PRMT1-213ENST00000529650 CLASP1Q7Z460 1538 aa39.95■■■■□ 3.99
PRMT1-213ENST00000529650 SYNJ1O43426 1573 aa39.93■■■■□ 3.98
PRMT1-213ENST00000529650 SUPT5HO00267 1087 aaKnown RBP39.88■■■■□ 3.97
PRMT1-213ENST00000529650 SYNJ2O15056 1496 aa39.85■■■■□ 3.97
PRMT1-213ENST00000529650 CHMP7Q8WUX9 453 aaPredicted RBP39.84■■■■□ 3.97
PRMT1-213ENST00000529650 ABCA5Q8WWZ7 1642 aa39.82■■■■□ 3.96
PRMT1-213ENST00000529650 GAPVD1Q14C86 1478 aa39.81■■■■□ 3.96
PRMT1-213ENST00000529650 ABCA10Q8WWZ4 1543 aa39.79■■■■□ 3.96
PRMT1-213ENST00000529650 BIVM-ERCC5R4GMW8 1640 aa39.65■■■■□ 3.94
PRMT1-213ENST00000529650 TOP2BQ02880 1626 aa39.6■■■■□ 3.93
PRMT1-213ENST00000529650 TRHP20396 242 aaPredicted RBP39.58■■■■□ 3.93
PRMT1-213ENST00000529650 WRNQ14191 1432 aaPredicted RBP eCLIP39.57■■■■□ 3.93
PRMT1-213ENST00000529650 ADAMTS12P58397 1594 aa39.53■■■■□ 3.92
PRMT1-213ENST00000529650 GRIN2AQ12879 1464 aa39.47■■■■□ 3.91
PRMT1-213ENST00000529650 CEP170Q5SW79 1584 aa39.38■■■■□ 3.89
PRMT1-213ENST00000529650 NUP160Q12769 1436 aa39.31■■■■□ 3.88
PRMT1-213ENST00000529650 ERICH3Q5RHP9 1530 aa39.31■■■■□ 3.88
PRMT1-213ENST00000529650 ERCC6L2Q5T890 1561 aa39.31■■■■□ 3.88
PRMT1-213ENST00000529650 FHAD1B1AJZ9 1412 aa39.3■■■■□ 3.88
PRMT1-213ENST00000529650 SHROOM2Q13796 1616 aa39.24■■■■□ 3.87
PRMT1-213ENST00000529650 RUSC2Q8N2Y8 1516 aa38.99■■■■□ 3.83
PRMT1-213ENST00000529650 PRG4Q92954 1404 aaPredicted RBP38.91■■■■□ 3.82
PRMT1-213ENST00000529650 JPH4Q96JJ6 628 aa38.81■■■■□ 3.8
PRMT1-213ENST00000529650 CUL7Q14999 1698 aa38.81■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms