RNA–Protein interactions for RNA: ENST00000529638.1

GPAA1-212, Transcript of glycosylphosphatidylinositol anchor attachment 1, humanhuman

TSL 5

Gene GPAA1, Length 1,570 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAA1-212ENST00000529638 NISCHQ9Y2I1 1504 aa41.48■■■■■ 4.23
GPAA1-212ENST00000529638 CCDC180Q9P1Z9 1646 aa36.34■■■■□ 3.41
GPAA1-212ENST00000529638 ZCCHC6Q5VYS8 1495 aaKnown RBP34.81■■■■□ 3.16
GPAA1-212ENST00000529638 ABCC9O60706 1549 aa34.54■■■■□ 3.12
GPAA1-212ENST00000529638 DCAF1Q9Y4B6 1507 aa34.37■■■■□ 3.09
GPAA1-212ENST00000529638 DCAF8L2P0C7V8 631 aa34.22■■■■□ 3.07
GPAA1-212ENST00000529638 MYO15BQ96JP2 1530 aa34.09■■■■□ 3.05
GPAA1-212ENST00000529638 NACADO15069 1562 aa33.93■■■■□ 3.02
GPAA1-212ENST00000529638 RB1CC1Q8TDY2 1594 aa33.69■■■□□ 2.98
GPAA1-212ENST00000529638 SHROOM4Q9ULL8 1493 aa33.5■■■□□ 2.95
GPAA1-212ENST00000529638 SCRIBQ14160 1630 aa33.3■■■□□ 2.92
GPAA1-212ENST00000529638 UNC13AQ9UPW8 1703 aa32.89■■■□□ 2.85
GPAA1-212ENST00000529638 BICRAQ9NZM4 1560 aa32.64■■■□□ 2.81
GPAA1-212ENST00000529638 PABPN1Q86U42 306 aaKnown RBP eCLIP32.48■■■□□ 2.796e-6■□□□□ 9.1
GPAA1-212ENST00000529638 CECR2Q9BXF3 1484 aa32.2■■■□□ 2.74
GPAA1-212ENST00000529638 SUPT5HO00267 1087 aaKnown RBP32.08■■■□□ 2.73
GPAA1-212ENST00000529638 BAZ1AQ9NRL2 1556 aaPredicted RBP32.07■■■□□ 2.72
GPAA1-212ENST00000529638 RSF1Q96T23 1441 aaPredicted RBP32.04■■■□□ 2.72
GPAA1-212ENST00000529638 MROH2BQ7Z745 1585 aa31.99■■■□□ 2.71
GPAA1-212ENST00000529638 SMARCA4P51532 1647 aa31.94■■■□□ 2.7
GPAA1-212ENST00000529638 EIF4G1Q04637 1599 aaKnown RBP31.69■■■□□ 2.66
GPAA1-212ENST00000529638 WIZO95785 1651 aa31.68■■■□□ 2.66
GPAA1-212ENST00000529638 PEG3Q9GZU2 1588 aa31.61■■■□□ 2.65
GPAA1-212ENST00000529638 SMARCA2P51531 1590 aa31.51■■■□□ 2.64
GPAA1-212ENST00000529638 ATAD2BQ9ULI0 1458 aa31.5■■■□□ 2.63
GPAA1-212ENST00000529638 TOP2AP11388 1531 aaKnown RBP31.44■■■□□ 2.62
GPAA1-212ENST00000529638 BAZ1BQ9UIG0 1483 aaKnown RBP31.31■■■□□ 2.6
GPAA1-212ENST00000529638 NCAPD3P42695 1498 aa31.31■■■□□ 2.6
GPAA1-212ENST00000529638 CC2D2AQ9P2K1 1620 aa31.28■■■□□ 2.6
GPAA1-212ENST00000529638 HMGXB3Q12766 1538 aa31.26■■■□□ 2.6
GPAA1-212ENST00000529638 CCDC88BA6NC98 1476 aa31.06■■■□□ 2.56
GPAA1-212ENST00000529638 DNAJC5BQ9UF47 199 aa30.67■■■□□ 2.5
GPAA1-212ENST00000529638 CHIC1Q5VXU3 224 aa30.6■■■□□ 2.49
GPAA1-212ENST00000529638 CFTRP13569 1480 aa30.52■■■□□ 2.48
GPAA1-212ENST00000529638 CADPSQ9ULU8 1353 aa30.47■■■□□ 2.47
GPAA1-212ENST00000529638 PRDM2Q13029 1718 aa30.31■■■□□ 2.44
GPAA1-212ENST00000529638 LAMC3Q9Y6N6 1575 aa30.29■■■□□ 2.44
GPAA1-212ENST00000529638 ABCC8Q09428 1581 aa30.27■■■□□ 2.44
GPAA1-212ENST00000529638 TRIM41Q8WV44 630 aa30.24■■■□□ 2.43
GPAA1-212ENST00000529638 NESP48681 1621 aa30.21■■■□□ 2.43
GPAA1-212ENST00000529638 WRNQ14191 1432 aaPredicted RBP eCLIP30.19■■■□□ 2.42
GPAA1-212ENST00000529638 FANCD2Q9BXW9 1451 aa30.12■■■□□ 2.41
GPAA1-212ENST00000529638 PDS5BQ9NTI5 1447 aa30.07■■■□□ 2.4
GPAA1-212ENST00000529638 SYNJ1O43426 1573 aa30.03■■■□□ 2.4
GPAA1-212ENST00000529638 CEP164Q9UPV0 1460 aa29.98■■■□□ 2.39
GPAA1-212ENST00000529638 TOP2BQ02880 1626 aa29.97■■■□□ 2.39
GPAA1-212ENST00000529638 CUX1P39880 1505 aa29.95■■■□□ 2.38
GPAA1-212ENST00000529638 BIVM-ERCC5R4GMW8 1640 aa29.95■■■□□ 2.38
GPAA1-212ENST00000529638 KIF21AQ7Z4S6 1674 aa29.86■■■□□ 2.37
GPAA1-212ENST00000529638 DNMBPQ6XZF7 1577 aa29.81■■■□□ 2.36
GPAA1-212ENST00000529638 TOPBP1Q92547 1522 aa29.76■■■□□ 2.35
GPAA1-212ENST00000529638 URB2Q14146 1524 aaKnown RBP29.75■■■□□ 2.35
GPAA1-212ENST00000529638 ERCC6Q03468 1493 aa29.7■■■□□ 2.34
GPAA1-212ENST00000529638 MRC2Q9UBG0 1479 aa29.7■■■□□ 2.34
GPAA1-212ENST00000529638 FGD5Q6ZNL6 1462 aa29.68■■■□□ 2.34
GPAA1-212ENST00000529638 SOGA1O94964 1423 aa29.65■■■□□ 2.34
GPAA1-212ENST00000529638 EEA1Q15075 1411 aa29.65■■■□□ 2.34
GPAA1-212ENST00000529638 FAM9AQ8IZU1 332 aaPredicted RBP29.6■■■□□ 2.33
GPAA1-212ENST00000529638 POLA1P09884 1462 aaPredicted RBP29.59■■■□□ 2.33
GPAA1-212ENST00000529638 WDR62O43379 1518 aa29.56■■■□□ 2.32
GPAA1-212ENST00000529638 RUSC2Q8N2Y8 1516 aa29.52■■■□□ 2.32
GPAA1-212ENST00000529638 THOC2Q8NI27 1593 aaKnown RBP29.51■■■□□ 2.31
GPAA1-212ENST00000529638 KIF27Q86VH2 1401 aa29.47■■■□□ 2.31
GPAA1-212ENST00000529638 RAD54L2Q9Y4B4 1467 aa29.45■■■□□ 2.3
GPAA1-212ENST00000529638 ABCA10Q8WWZ4 1543 aa29.44■■■□□ 2.3
GPAA1-212ENST00000529638 CUX2O14529 1486 aa29.43■■■□□ 2.3
GPAA1-212ENST00000529638 CSRNP3Q8WYN3 585 aa29.43■■■□□ 2.3
GPAA1-212ENST00000529638 WDR97A6NE52 1622 aa29.34■■■□□ 2.29
GPAA1-212ENST00000529638 LOC105371045A0A1W2PR82 267 aa29.34■■■□□ 2.29
GPAA1-212ENST00000529638 TARBP1Q13395 1621 aaKnown RBP29.33■■■□□ 2.29
GPAA1-212ENST00000529638 IFT140Q96RY7 1462 aa29.3■■■□□ 2.28
GPAA1-212ENST00000529638 KIF21BO75037 1637 aa29.24■■■□□ 2.27
GPAA1-212ENST00000529638 ABCA5Q8WWZ7 1642 aa29.21■■■□□ 2.27
GPAA1-212ENST00000529638 IGF1RP08069 1367 aa29.2■■■□□ 2.27
GPAA1-212ENST00000529638 GOLGA3Q08378 1498 aa29.19■■■□□ 2.26
GPAA1-212ENST00000529638 PRXQ9BXM0 1461 aa29.18■■■□□ 2.26
GPAA1-212ENST00000529638 TDRD9Q8NDG6 1382 aaKnown RBP29.18■■■□□ 2.26
GPAA1-212ENST00000529638 GAPVD1Q14C86 1478 aa29.17■■■□□ 2.26
GPAA1-212ENST00000529638 EHMT2Q96KQ7 1210 aa29.13■■■□□ 2.25
GPAA1-212ENST00000529638 ERICH3Q5RHP9 1530 aa29.12■■■□□ 2.25
GPAA1-212ENST00000529638 RAPGEF2Q9Y4G8 1499 aa29.09■■■□□ 2.25
GPAA1-212ENST00000529638 ZNF608Q9ULD9 1512 aaPredicted RBP29.07■■■□□ 2.24
GPAA1-212ENST00000529638 CARMIL1Q5VZK9 1371 aa29.06■■■□□ 2.24
GPAA1-212ENST00000529638 AQRO60306 1485 aaKnown RBP eCLIP29.05■■■□□ 2.244e-8■■■■■ 31.4
GPAA1-212ENST00000529638 CUL7Q14999 1698 aa29.04■■■□□ 2.24
GPAA1-212ENST00000529638 TNIKQ9UKE5 1360 aa29.03■■■□□ 2.24
GPAA1-212ENST00000529638 GRIN2BQ13224 1484 aa29.01■■■□□ 2.23
GPAA1-212ENST00000529638 EIF4G3O43432 1585 aaKnown RBP29■■■□□ 2.23
GPAA1-212ENST00000529638 UBTFP17480 764 aaKnown RBP29■■■□□ 2.23
GPAA1-212ENST00000529638 PBRM1Q86U86 1689 aa28.99■■■□□ 2.23
GPAA1-212ENST00000529638 FHAD1B1AJZ9 1412 aa28.87■■■□□ 2.21
GPAA1-212ENST00000529638 ADAMTS12P58397 1594 aa28.87■■■□□ 2.21
GPAA1-212ENST00000529638 CEP162Q5TB80 1403 aa28.83■■■□□ 2.21
GPAA1-212ENST00000529638 SNAPC4Q5SXM2 1469 aa28.82■■■□□ 2.2
GPAA1-212ENST00000529638 MAGI1Q96QZ7 1491 aaPredicted RBP28.81■■■□□ 2.2
GPAA1-212ENST00000529638 CLIP1P30622 1438 aa28.69■■■□□ 2.18
GPAA1-212ENST00000529638 SYNJ2O15056 1496 aa28.68■■■□□ 2.18
GPAA1-212ENST00000529638 GRIN2AQ12879 1464 aa28.63■■■□□ 2.17
GPAA1-212ENST00000529638 CTTNBP2Q8WZ74 1663 aa28.62■■■□□ 2.17
GPAA1-212ENST00000529638 CHMP7Q8WUX9 453 aaPredicted RBP28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms