RNA–Protein interactions for RNA: ENST00000529577.5

SF3B2-207, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-207ENST00000529577 NISCHQ9Y2I1 1504 aa51.94■■■■■ 5.91
SF3B2-207ENST00000529577 ABCC9O60706 1549 aa46.68■■■■■ 5.06
SF3B2-207ENST00000529577 CCDC180Q9P1Z9 1646 aa46.57■■■■■ 5.05
SF3B2-207ENST00000529577 RB1CC1Q8TDY2 1594 aa44.3■■■■■ 4.68
SF3B2-207ENST00000529577 DNAJC5BQ9UF47 199 aa44■■■■■ 4.63
SF3B2-207ENST00000529577 NACADO15069 1562 aa44■■■■■ 4.63
SF3B2-207ENST00000529577 DCAF8L2P0C7V8 631 aa43.67■■■■■ 4.58
SF3B2-207ENST00000529577 UNC13AQ9UPW8 1703 aa43.53■■■■■ 4.56
SF3B2-207ENST00000529577 PABPN1Q86U42 306 aaKnown RBP eCLIP43.45■■■■■ 4.55
SF3B2-207ENST00000529577 MYO15BQ96JP2 1530 aa43.39■■■■■ 4.54
SF3B2-207ENST00000529577 BICRAQ9NZM4 1560 aa43.25■■■■■ 4.51
SF3B2-207ENST00000529577 ZCCHC6Q5VYS8 1495 aaKnown RBP43.06■■■■■ 4.48
SF3B2-207ENST00000529577 DCAF1Q9Y4B6 1507 aa42.85■■■■■ 4.45
SF3B2-207ENST00000529577 SCRIBQ14160 1630 aa42.49■■■■■ 4.39
SF3B2-207ENST00000529577 SHROOM4Q9ULL8 1493 aa42.37■■■■■ 4.37
SF3B2-207ENST00000529577 CC2D2AQ9P2K1 1620 aa42.18■■■■■ 4.34
SF3B2-207ENST00000529577 EIF4G1Q04637 1599 aaKnown RBP42.06■■■■■ 4.32
SF3B2-207ENST00000529577 CECR2Q9BXF3 1484 aa41.99■■■■■ 4.31
SF3B2-207ENST00000529577 NCAPD3P42695 1498 aa40.68■■■■■ 4.1
SF3B2-207ENST00000529577 ATAD2BQ9ULI0 1458 aa40.58■■■■■ 4.09
SF3B2-207ENST00000529577 SMARCA4P51532 1647 aa40.53■■■■■ 4.08
SF3B2-207ENST00000529577 HMGXB3Q12766 1538 aa40.35■■■■■ 4.05
SF3B2-207ENST00000529577 SMARCA2P51531 1590 aa40.35■■■■■ 4.05
SF3B2-207ENST00000529577 BAZ1AQ9NRL2 1556 aaPredicted RBP40.23■■■■■ 4.03
SF3B2-207ENST00000529577 DNAJC5Q9H3Z4 198 aa40.22■■■■■ 4.03
SF3B2-207ENST00000529577 NESP48681 1621 aa40.17■■■■■ 4.02
SF3B2-207ENST00000529577 PEG3Q9GZU2 1588 aa40.14■■■■■ 4.02
SF3B2-207ENST00000529577 CUX2O14529 1486 aa40.13■■■■■ 4.01
SF3B2-207ENST00000529577 ERCC6Q03468 1493 aa40.13■■■■■ 4.01
SF3B2-207ENST00000529577 MROH2BQ7Z745 1585 aa40.1■■■■■ 4.01
SF3B2-207ENST00000529577 BAZ1BQ9UIG0 1483 aaKnown RBP40.08■■■■■ 4.01
SF3B2-207ENST00000529577 THOC2Q8NI27 1593 aaKnown RBP39.75■■■■□ 3.95
SF3B2-207ENST00000529577 LAMC3Q9Y6N6 1575 aa39.72■■■■□ 3.95
SF3B2-207ENST00000529577 KIF21AQ7Z4S6 1674 aa39.63■■■■□ 3.93
SF3B2-207ENST00000529577 WIZO95785 1651 aa39.62■■■■□ 3.93
SF3B2-207ENST00000529577 PDS5BQ9NTI5 1447 aa39.4■■■■□ 3.9
SF3B2-207ENST00000529577 CADPSQ9ULU8 1353 aa39.4■■■■□ 3.9
SF3B2-207ENST00000529577 RSF1Q96T23 1441 aaPredicted RBP39.21■■■■□ 3.87
SF3B2-207ENST00000529577 MRC2Q9UBG0 1479 aa39.16■■■■□ 3.86
SF3B2-207ENST00000529577 WDR62O43379 1518 aa39.13■■■■□ 3.85
SF3B2-207ENST00000529577 TOP2AP11388 1531 aaKnown RBP39.01■■■■□ 3.84
SF3B2-207ENST00000529577 CFTRP13569 1480 aa38.99■■■■□ 3.83
SF3B2-207ENST00000529577 FANCD2Q9BXW9 1451 aa38.97■■■■□ 3.83
SF3B2-207ENST00000529577 CEP164Q9UPV0 1460 aa38.97■■■■□ 3.83
SF3B2-207ENST00000529577 URB2Q14146 1524 aaKnown RBP38.76■■■■□ 3.8
SF3B2-207ENST00000529577 CCDC88BA6NC98 1476 aa38.62■■■■□ 3.77
SF3B2-207ENST00000529577 PRDM2Q13029 1718 aa38.59■■■■□ 3.77
SF3B2-207ENST00000529577 TRIM41Q8WV44 630 aa38.37■■■■□ 3.73
SF3B2-207ENST00000529577 ZNF608Q9ULD9 1512 aaPredicted RBP38.31■■■■□ 3.72
SF3B2-207ENST00000529577 TOPBP1Q92547 1522 aa38.27■■■■□ 3.72
SF3B2-207ENST00000529577 OSCARQ8IYS5 282 aa38.23■■■■□ 3.71
SF3B2-207ENST00000529577 IFT140Q96RY7 1462 aa38.19■■■■□ 3.7
SF3B2-207ENST00000529577 DNMBPQ6XZF7 1577 aa38.09■■■■□ 3.69
SF3B2-207ENST00000529577 EIF4G3O43432 1585 aaKnown RBP38.03■■■■□ 3.68
SF3B2-207ENST00000529577 TARBP1Q13395 1621 aaKnown RBP38.01■■■■□ 3.67
SF3B2-207ENST00000529577 ABCC8Q09428 1581 aa38■■■■□ 3.67
SF3B2-207ENST00000529577 RIMBP3CA6NJZ7 1639 aa37.93■■■■□ 3.66
SF3B2-207ENST00000529577 RIMBP3BA6NNM3 1639 aa37.93■■■■□ 3.66
SF3B2-207ENST00000529577 RIMBP3Q9UFD9 1639 aa37.93■■■■□ 3.66
SF3B2-207ENST00000529577 AQRO60306 1485 aaKnown RBP eCLIP37.89■■■■□ 3.66
SF3B2-207ENST00000529577 POLA1P09884 1462 aaPredicted RBP37.89■■■■□ 3.66
SF3B2-207ENST00000529577 RAD54L2Q9Y4B4 1467 aa37.79■■■■□ 3.64
SF3B2-207ENST00000529577 CHD1O14646 1710 aa37.78■■■■□ 3.64
SF3B2-207ENST00000529577 ARHGEF11O15085 1522 aa37.77■■■■□ 3.64
SF3B2-207ENST00000529577 CUX1P39880 1505 aa37.66■■■■□ 3.62
SF3B2-207ENST00000529577 SOGA1O94964 1423 aa37.63■■■■□ 3.61
SF3B2-207ENST00000529577 FGD5Q6ZNL6 1462 aa37.63■■■■□ 3.61
SF3B2-207ENST00000529577 TDRD9Q8NDG6 1382 aaKnown RBP37.62■■■■□ 3.61
SF3B2-207ENST00000529577 SNAPC4Q5SXM2 1469 aa37.47■■■■□ 3.59
SF3B2-207ENST00000529577 FBLN2P98095 1184 aa37.47■■■■□ 3.59
SF3B2-207ENST00000529577 WDR97A6NE52 1622 aa37.45■■■■□ 3.59
SF3B2-207ENST00000529577 ARAP1Q96P48 1450 aa37.45■■■■□ 3.59
SF3B2-207ENST00000529577 CYB5RLQ6IPT4 315 aa37.41■■■■□ 3.58
SF3B2-207ENST00000529577 CLASP1Q7Z460 1538 aa37.36■■■■□ 3.57
SF3B2-207ENST00000529577 SUPT5HO00267 1087 aaKnown RBP37.31■■■■□ 3.56
SF3B2-207ENST00000529577 GRIN2BQ13224 1484 aa37.3■■■■□ 3.56
SF3B2-207ENST00000529577 MAGI1Q96QZ7 1491 aaPredicted RBP37.29■■■■□ 3.56
SF3B2-207ENST00000529577 PBRM1Q86U86 1689 aa37.25■■■■□ 3.55
SF3B2-207ENST00000529577 SYNJ2O15056 1496 aa37.2■■■■□ 3.54
SF3B2-207ENST00000529577 ABCA5Q8WWZ7 1642 aa37.19■■■■□ 3.54
SF3B2-207ENST00000529577 ABCA10Q8WWZ4 1543 aa37.18■■■■□ 3.54
SF3B2-207ENST00000529577 GAPVD1Q14C86 1478 aa37.18■■■■□ 3.54
SF3B2-207ENST00000529577 CHMP7Q8WUX9 453 aaPredicted RBP37.17■■■■□ 3.54
SF3B2-207ENST00000529577 SYNJ1O43426 1573 aa37.17■■■■□ 3.54
SF3B2-207ENST00000529577 BIVM-ERCC5R4GMW8 1640 aa37.01■■■■□ 3.52
SF3B2-207ENST00000529577 TOP2BQ02880 1626 aa36.97■■■■□ 3.51
SF3B2-207ENST00000529577 WRNQ14191 1432 aaPredicted RBP eCLIP36.91■■■■□ 3.5
SF3B2-207ENST00000529577 TRHP20396 242 aaPredicted RBP36.89■■■■□ 3.5
SF3B2-207ENST00000529577 ADAMTS12P58397 1594 aa36.89■■■■□ 3.5
SF3B2-207ENST00000529577 ERCC6L2Q5T890 1561 aa36.87■■■■□ 3.49
SF3B2-207ENST00000529577 GRIN2AQ12879 1464 aa36.86■■■■□ 3.49
SF3B2-207ENST00000529577 CEP170Q5SW79 1584 aa36.83■■■■□ 3.49
SF3B2-207ENST00000529577 NUP160Q12769 1436 aa36.78■■■■□ 3.48
SF3B2-207ENST00000529577 FHAD1B1AJZ9 1412 aa36.68■■■■□ 3.46
SF3B2-207ENST00000529577 ERICH3Q5RHP9 1530 aa36.67■■■■□ 3.46
SF3B2-207ENST00000529577 SHROOM2Q13796 1616 aa36.67■■■■□ 3.46
SF3B2-207ENST00000529577 RUSC2Q8N2Y8 1516 aa36.39■■■■□ 3.42
SF3B2-207ENST00000529577 PRG4Q92954 1404 aaPredicted RBP36.37■■■■□ 3.41
SF3B2-207ENST00000529577 JPH4Q96JJ6 628 aa36.31■■■■□ 3.4
SF3B2-207ENST00000529577 IGF1RP08069 1367 aa36.26■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms