RNA–Protein interactions for RNA: ENST00000529561.5

CTSF-207, Transcript of cathepsin F, humanhuman

TSL 5

Gene CTSF, Length 559 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-207ENST00000529561 NISCHQ9Y2I1 1504 aa30.29■■■□□ 2.44
CTSF-207ENST00000529561 ABCC9O60706 1549 aa27.38■■□□□ 1.97
CTSF-207ENST00000529561 CCDC180Q9P1Z9 1646 aa27.35■■□□□ 1.97
CTSF-207ENST00000529561 RB1CC1Q8TDY2 1594 aa26.03■■□□□ 1.76
CTSF-207ENST00000529561 NACADO15069 1562 aa25.82■■□□□ 1.72
CTSF-207ENST00000529561 DNAJC5BQ9UF47 199 aa25.78■■□□□ 1.72
CTSF-207ENST00000529561 UNC13AQ9UPW8 1703 aa25.59■■□□□ 1.69
CTSF-207ENST00000529561 DCAF8L2P0C7V8 631 aa25.48■■□□□ 1.67
CTSF-207ENST00000529561 MYO15BQ96JP2 1530 aa25.42■■□□□ 1.66
CTSF-207ENST00000529561 PABPN1Q86U42 306 aaKnown RBP eCLIP25.39■■□□□ 1.66
CTSF-207ENST00000529561 BICRAQ9NZM4 1560 aa25.32■■□□□ 1.64
CTSF-207ENST00000529561 ZCCHC6Q5VYS8 1495 aaKnown RBP25.1■■□□□ 1.61
CTSF-207ENST00000529561 DCAF1Q9Y4B6 1507 aa25.03■■□□□ 1.6
CTSF-207ENST00000529561 SHROOM4Q9ULL8 1493 aa24.94■■□□□ 1.58
CTSF-207ENST00000529561 SCRIBQ14160 1630 aa24.86■■□□□ 1.57
CTSF-207ENST00000529561 CC2D2AQ9P2K1 1620 aa24.79■■□□□ 1.56
CTSF-207ENST00000529561 EIF4G1Q04637 1599 aaKnown RBP24.68■■□□□ 1.54
CTSF-207ENST00000529561 CECR2Q9BXF3 1484 aa24.68■■□□□ 1.54
CTSF-207ENST00000529561 NCAPD3P42695 1498 aa23.8■■□□□ 1.4
CTSF-207ENST00000529561 DNAJC5Q9H3Z4 198 aa23.76■■□□□ 1.39
CTSF-207ENST00000529561 ATAD2BQ9ULI0 1458 aa23.72■■□□□ 1.39
CTSF-207ENST00000529561 SMARCA4P51532 1647 aa23.72■■□□□ 1.39
CTSF-207ENST00000529561 CUX2O14529 1486 aa23.68■■□□□ 1.38
CTSF-207ENST00000529561 HMGXB3Q12766 1538 aa23.67■■□□□ 1.38
CTSF-207ENST00000529561 SMARCA2P51531 1590 aa23.66■■□□□ 1.38
CTSF-207ENST00000529561 ERCC6Q03468 1493 aa23.63■■□□□ 1.37
CTSF-207ENST00000529561 BAZ1AQ9NRL2 1556 aaPredicted RBP23.54■■□□□ 1.36
CTSF-207ENST00000529561 NESP48681 1621 aa23.5■■□□□ 1.35
CTSF-207ENST00000529561 PEG3Q9GZU2 1588 aa23.48■■□□□ 1.35
CTSF-207ENST00000529561 BAZ1BQ9UIG0 1483 aaKnown RBP23.48■■□□□ 1.35
CTSF-207ENST00000529561 THOC2Q8NI27 1593 aaKnown RBP23.37■■□□□ 1.33
CTSF-207ENST00000529561 MROH2BQ7Z745 1585 aa23.35■■□□□ 1.33
CTSF-207ENST00000529561 LAMC3Q9Y6N6 1575 aa23.34■■□□□ 1.33
CTSF-207ENST00000529561 KIF21AQ7Z4S6 1674 aa23.28■■□□□ 1.32
CTSF-207ENST00000529561 PDS5BQ9NTI5 1447 aa23.13■■□□□ 1.29
CTSF-207ENST00000529561 WIZO95785 1651 aa23.1■■□□□ 1.29
CTSF-207ENST00000529561 CADPSQ9ULU8 1353 aa23.03■■□□□ 1.28
CTSF-207ENST00000529561 MRC2Q9UBG0 1479 aa22.98■■□□□ 1.27
CTSF-207ENST00000529561 WDR62O43379 1518 aa22.98■■□□□ 1.27
CTSF-207ENST00000529561 CEP164Q9UPV0 1460 aa22.86■■□□□ 1.25
CTSF-207ENST00000529561 FANCD2Q9BXW9 1451 aa22.81■■□□□ 1.24
CTSF-207ENST00000529561 TOP2AP11388 1531 aaKnown RBP22.78■■□□□ 1.24
CTSF-207ENST00000529561 CFTRP13569 1480 aa22.78■■□□□ 1.24
CTSF-207ENST00000529561 RSF1Q96T23 1441 aaPredicted RBP22.76■■□□□ 1.23
CTSF-207ENST00000529561 PRDM2Q13029 1718 aa22.71■■□□□ 1.23
CTSF-207ENST00000529561 URB2Q14146 1524 aaKnown RBP22.67■■□□□ 1.22
CTSF-207ENST00000529561 TRIM41Q8WV44 630 aa22.63■■□□□ 1.21
CTSF-207ENST00000529561 CCDC88BA6NC98 1476 aa22.47■■□□□ 1.19
CTSF-207ENST00000529561 OSCARQ8IYS5 282 aa22.47■■□□□ 1.19
CTSF-207ENST00000529561 IFT140Q96RY7 1462 aa22.4■■□□□ 1.18
CTSF-207ENST00000529561 ZNF608Q9ULD9 1512 aaPredicted RBP22.39■■□□□ 1.17
CTSF-207ENST00000529561 TOPBP1Q92547 1522 aa22.38■■□□□ 1.17
CTSF-207ENST00000529561 RIMBP3CA6NJZ7 1639 aa22.35■■□□□ 1.17
CTSF-207ENST00000529561 RIMBP3BA6NNM3 1639 aa22.35■■□□□ 1.17
CTSF-207ENST00000529561 RIMBP3Q9UFD9 1639 aa22.35■■□□□ 1.17
CTSF-207ENST00000529561 EIF4G3O43432 1585 aaKnown RBP22.33■■□□□ 1.16
CTSF-207ENST00000529561 DNMBPQ6XZF7 1577 aa22.31■■□□□ 1.16
CTSF-207ENST00000529561 ABCC8Q09428 1581 aa22.29■■□□□ 1.16
CTSF-207ENST00000529561 TARBP1Q13395 1621 aaKnown RBP22.24■■□□□ 1.15
CTSF-207ENST00000529561 CHD1O14646 1710 aa22.23■■□□□ 1.15
CTSF-207ENST00000529561 ARHGEF11O15085 1522 aa22.22■■□□□ 1.15
CTSF-207ENST00000529561 POLA1P09884 1462 aaPredicted RBP22.15■■□□□ 1.14
CTSF-207ENST00000529561 AQRO60306 1485 aaKnown RBP eCLIP22.14■■□□□ 1.13
CTSF-207ENST00000529561 RAD54L2Q9Y4B4 1467 aa22.04■■□□□ 1.12
CTSF-207ENST00000529561 WDR97A6NE52 1622 aa22.01■■□□□ 1.11
CTSF-207ENST00000529561 ARAP1Q96P48 1450 aa22■■□□□ 1.11
CTSF-207ENST00000529561 SOGA1O94964 1423 aa21.98■■□□□ 1.11
CTSF-207ENST00000529561 FGD5Q6ZNL6 1462 aa21.98■■□□□ 1.11
CTSF-207ENST00000529561 CUX1P39880 1505 aa21.96■■□□□ 1.11
CTSF-207ENST00000529561 CYB5RLQ6IPT4 315 aa21.95■■□□□ 1.1
CTSF-207ENST00000529561 TDRD9Q8NDG6 1382 aaKnown RBP21.95■■□□□ 1.1
CTSF-207ENST00000529561 SNAPC4Q5SXM2 1469 aa21.95■■□□□ 1.1
CTSF-207ENST00000529561 FBLN2P98095 1184 aa21.94■■□□□ 1.1
CTSF-207ENST00000529561 CLASP1Q7Z460 1538 aa21.91■■□□□ 1.1
CTSF-207ENST00000529561 MAGI1Q96QZ7 1491 aaPredicted RBP21.88■■□□□ 1.09
CTSF-207ENST00000529561 PBRM1Q86U86 1689 aa21.87■■□□□ 1.09
CTSF-207ENST00000529561 SYNJ1O43426 1573 aa21.87■■□□□ 1.09
CTSF-207ENST00000529561 GRIN2BQ13224 1484 aa21.84■■□□□ 1.09
CTSF-207ENST00000529561 SYNJ2O15056 1496 aa21.79■■□□□ 1.08
CTSF-207ENST00000529561 ABCA5Q8WWZ7 1642 aa21.77■■□□□ 1.08
CTSF-207ENST00000529561 CHMP7Q8WUX9 453 aaPredicted RBP21.77■■□□□ 1.08
CTSF-207ENST00000529561 TRHP20396 242 aaPredicted RBP21.75■■□□□ 1.07
CTSF-207ENST00000529561 GAPVD1Q14C86 1478 aa21.74■■□□□ 1.07
CTSF-207ENST00000529561 ABCA10Q8WWZ4 1543 aa21.73■■□□□ 1.07
CTSF-207ENST00000529561 BIVM-ERCC5R4GMW8 1640 aa21.62■■□□□ 1.05
CTSF-207ENST00000529561 ADAMTS12P58397 1594 aa21.61■■□□□ 1.05
CTSF-207ENST00000529561 GRIN2AQ12879 1464 aa21.58■■□□□ 1.05
CTSF-207ENST00000529561 TOP2BQ02880 1626 aa21.58■■□□□ 1.04
CTSF-207ENST00000529561 SUPT5HO00267 1087 aaKnown RBP21.56■■□□□ 1.04
CTSF-207ENST00000529561 ERCC6L2Q5T890 1561 aa21.56■■□□□ 1.04
CTSF-207ENST00000529561 CEP170Q5SW79 1584 aa21.55■■□□□ 1.04
CTSF-207ENST00000529561 WRNQ14191 1432 aaPredicted RBP eCLIP21.55■■□□□ 1.04
CTSF-207ENST00000529561 NUP160Q12769 1436 aa21.52■■□□□ 1.04
CTSF-207ENST00000529561 SHROOM2Q13796 1616 aa21.51■■□□□ 1.03
CTSF-207ENST00000529561 FHAD1B1AJZ9 1412 aa21.46■■□□□ 1.03
CTSF-207ENST00000529561 ERICH3Q5RHP9 1530 aa21.45■■□□□ 1.02
CTSF-207ENST00000529561 KIF13AQ9H1H9 1805 aa21.34■■□□□ 1.01
CTSF-207ENST00000529561 RUSC2Q8N2Y8 1516 aa21.32■■□□□ 1
CTSF-207ENST00000529561 PRG4Q92954 1404 aaPredicted RBP21.28■■□□□ 1
CTSF-207ENST00000529561 AEBP2Q6ZN18 517 aaPredicted RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms