RNA–Protein interactions for RNA: ENST00000529547.1

MRVI1-208, Transcript of murine retrovirus integration site 1 homolog, humanhuman

TSL 4

Gene MRVI1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRVI1-208ENST00000529547 NISCHQ9Y2I1 1504 aa33.62■■■□□ 2.97
MRVI1-208ENST00000529547 ABCC9O60706 1549 aa29.99■■■□□ 2.39
MRVI1-208ENST00000529547 CCDC180Q9P1Z9 1646 aa29.92■■■□□ 2.38
MRVI1-208ENST00000529547 RB1CC1Q8TDY2 1594 aa28.5■■■□□ 2.15
MRVI1-208ENST00000529547 DCAF8L2P0C7V8 631 aa28.49■■■□□ 2.15
MRVI1-208ENST00000529547 NACADO15069 1562 aa28.35■■■□□ 2.13
MRVI1-208ENST00000529547 DNAJC5BQ9UF47 199 aa28.08■■■□□ 2.09
MRVI1-208ENST00000529547 PABPN1Q86U42 306 aaKnown RBP eCLIP28.05■■■□□ 2.08
MRVI1-208ENST00000529547 MYO15BQ96JP2 1530 aa28.01■■■□□ 2.07
MRVI1-208ENST00000529547 ZCCHC6Q5VYS8 1495 aaKnown RBP27.89■■■□□ 2.05
MRVI1-208ENST00000529547 DCAF1Q9Y4B6 1507 aa27.72■■■□□ 2.03
MRVI1-208ENST00000529547 UNC13AQ9UPW8 1703 aa27.71■■■□□ 2.03
MRVI1-208ENST00000529547 BICRAQ9NZM4 1560 aa27.69■■■□□ 2.02
MRVI1-208ENST00000529547 SCRIBQ14160 1630 aa27.41■■□□□ 1.98
MRVI1-208ENST00000529547 SHROOM4Q9ULL8 1493 aa27.28■■□□□ 1.96
MRVI1-208ENST00000529547 CC2D2AQ9P2K1 1620 aa27■■□□□ 1.91
MRVI1-208ENST00000529547 EIF4G1Q04637 1599 aaKnown RBP27■■□□□ 1.91
MRVI1-208ENST00000529547 CECR2Q9BXF3 1484 aa26.98■■□□□ 1.91
MRVI1-208ENST00000529547 NCAPD3P42695 1498 aa26.25■■□□□ 1.79
MRVI1-208ENST00000529547 ATAD2BQ9ULI0 1458 aa26.2■■□□□ 1.78
MRVI1-208ENST00000529547 SMARCA4P51532 1647 aa26.13■■□□□ 1.77
MRVI1-208ENST00000529547 SMARCA2P51531 1590 aa26.07■■□□□ 1.76
MRVI1-208ENST00000529547 BAZ1AQ9NRL2 1556 aaPredicted RBP26.04■■□□□ 1.76
MRVI1-208ENST00000529547 HMGXB3Q12766 1538 aa25.98■■□□□ 1.75
MRVI1-208ENST00000529547 BAZ1BQ9UIG0 1483 aaKnown RBP25.93■■□□□ 1.74
MRVI1-208ENST00000529547 MROH2BQ7Z745 1585 aa25.93■■□□□ 1.74
MRVI1-208ENST00000529547 ERCC6Q03468 1493 aa25.86■■□□□ 1.73
MRVI1-208ENST00000529547 PEG3Q9GZU2 1588 aa25.86■■□□□ 1.73
MRVI1-208ENST00000529547 NESP48681 1621 aa25.81■■□□□ 1.72
MRVI1-208ENST00000529547 CUX2O14529 1486 aa25.7■■□□□ 1.7
MRVI1-208ENST00000529547 DNAJC5Q9H3Z4 198 aa25.62■■□□□ 1.69
MRVI1-208ENST00000529547 WIZO95785 1651 aa25.56■■□□□ 1.68
MRVI1-208ENST00000529547 LAMC3Q9Y6N6 1575 aa25.54■■□□□ 1.68
MRVI1-208ENST00000529547 RSF1Q96T23 1441 aaPredicted RBP25.5■■□□□ 1.67
MRVI1-208ENST00000529547 CADPSQ9ULU8 1353 aa25.5■■□□□ 1.67
MRVI1-208ENST00000529547 PDS5BQ9NTI5 1447 aa25.48■■□□□ 1.67
MRVI1-208ENST00000529547 THOC2Q8NI27 1593 aaKnown RBP25.38■■□□□ 1.65
MRVI1-208ENST00000529547 KIF21AQ7Z4S6 1674 aa25.31■■□□□ 1.64
MRVI1-208ENST00000529547 TOP2AP11388 1531 aaKnown RBP25.26■■□□□ 1.63
MRVI1-208ENST00000529547 MRC2Q9UBG0 1479 aa25.22■■□□□ 1.63
MRVI1-208ENST00000529547 CFTRP13569 1480 aa25.21■■□□□ 1.63
MRVI1-208ENST00000529547 FANCD2Q9BXW9 1451 aa25.17■■□□□ 1.62
MRVI1-208ENST00000529547 CEP164Q9UPV0 1460 aa25.15■■□□□ 1.62
MRVI1-208ENST00000529547 WDR62O43379 1518 aa25.12■■□□□ 1.61
MRVI1-208ENST00000529547 CCDC88BA6NC98 1476 aa25.05■■□□□ 1.6
MRVI1-208ENST00000529547 URB2Q14146 1524 aaKnown RBP24.95■■□□□ 1.58
MRVI1-208ENST00000529547 TOPBP1Q92547 1522 aa24.7■■□□□ 1.54
MRVI1-208ENST00000529547 PRDM2Q13029 1718 aa24.69■■□□□ 1.54
MRVI1-208ENST00000529547 OSCARQ8IYS5 282 aa24.68■■□□□ 1.54
MRVI1-208ENST00000529547 IFT140Q96RY7 1462 aa24.66■■□□□ 1.54
MRVI1-208ENST00000529547 ZNF608Q9ULD9 1512 aaPredicted RBP24.65■■□□□ 1.54
MRVI1-208ENST00000529547 ABCC8Q09428 1581 aa24.62■■□□□ 1.53
MRVI1-208ENST00000529547 TRIM41Q8WV44 630 aa24.61■■□□□ 1.53
MRVI1-208ENST00000529547 SUPT5HO00267 1087 aaKnown RBP24.6■■□□□ 1.53
MRVI1-208ENST00000529547 DNMBPQ6XZF7 1577 aa24.57■■□□□ 1.52
MRVI1-208ENST00000529547 AQRO60306 1485 aaKnown RBP eCLIP24.47■■□□□ 1.51
MRVI1-208ENST00000529547 POLA1P09884 1462 aaPredicted RBP24.47■■□□□ 1.51
MRVI1-208ENST00000529547 RAD54L2Q9Y4B4 1467 aa24.43■■□□□ 1.5
MRVI1-208ENST00000529547 SOGA1O94964 1423 aa24.41■■□□□ 1.5
MRVI1-208ENST00000529547 TARBP1Q13395 1621 aaKnown RBP24.4■■□□□ 1.5
MRVI1-208ENST00000529547 EIF4G3O43432 1585 aaKnown RBP24.4■■□□□ 1.5
MRVI1-208ENST00000529547 TDRD9Q8NDG6 1382 aaKnown RBP24.38■■□□□ 1.49
MRVI1-208ENST00000529547 FGD5Q6ZNL6 1462 aa24.34■■□□□ 1.49
MRVI1-208ENST00000529547 CUX1P39880 1505 aa24.34■■□□□ 1.49
MRVI1-208ENST00000529547 FBLN2P98095 1184 aa24.33■■□□□ 1.49
MRVI1-208ENST00000529547 RIMBP3CA6NJZ7 1639 aa24.19■■□□□ 1.46
MRVI1-208ENST00000529547 RIMBP3BA6NNM3 1639 aa24.19■■□□□ 1.46
MRVI1-208ENST00000529547 RIMBP3Q9UFD9 1639 aa24.19■■□□□ 1.46
MRVI1-208ENST00000529547 ARHGEF11O15085 1522 aa24.18■■□□□ 1.46
MRVI1-208ENST00000529547 SNAPC4Q5SXM2 1469 aa24.18■■□□□ 1.46
MRVI1-208ENST00000529547 CHMP7Q8WUX9 453 aaPredicted RBP24.16■■□□□ 1.46
MRVI1-208ENST00000529547 GRIN2BQ13224 1484 aa24.13■■□□□ 1.45
MRVI1-208ENST00000529547 CYB5RLQ6IPT4 315 aa24.13■■□□□ 1.45
MRVI1-208ENST00000529547 CHD1O14646 1710 aa24.13■■□□□ 1.45
MRVI1-208ENST00000529547 WDR97A6NE52 1622 aa24.1■■□□□ 1.45
MRVI1-208ENST00000529547 MAGI1Q96QZ7 1491 aaPredicted RBP24.08■■□□□ 1.45
MRVI1-208ENST00000529547 GAPVD1Q14C86 1478 aa24.07■■□□□ 1.44
MRVI1-208ENST00000529547 ABCA10Q8WWZ4 1543 aa24.05■■□□□ 1.44
MRVI1-208ENST00000529547 WRNQ14191 1432 aaPredicted RBP eCLIP24.03■■□□□ 1.44
MRVI1-208ENST00000529547 SYNJ2O15056 1496 aa24.02■■□□□ 1.44
MRVI1-208ENST00000529547 ARAP1Q96P48 1450 aa23.98■■□□□ 1.43
MRVI1-208ENST00000529547 CLASP1Q7Z460 1538 aa23.94■■□□□ 1.42
MRVI1-208ENST00000529547 SYNJ1O43426 1573 aa23.94■■□□□ 1.42
MRVI1-208ENST00000529547 TOP2BQ02880 1626 aa23.93■■□□□ 1.42
MRVI1-208ENST00000529547 ABCA5Q8WWZ7 1642 aa23.93■■□□□ 1.42
MRVI1-208ENST00000529547 PBRM1Q86U86 1689 aa23.88■■□□□ 1.41
MRVI1-208ENST00000529547 BIVM-ERCC5R4GMW8 1640 aa23.88■■□□□ 1.41
MRVI1-208ENST00000529547 GRIN2AQ12879 1464 aa23.81■■□□□ 1.4
MRVI1-208ENST00000529547 TRHP20396 242 aaPredicted RBP23.8■■□□□ 1.4
MRVI1-208ENST00000529547 FHAD1B1AJZ9 1412 aa23.78■■□□□ 1.4
MRVI1-208ENST00000529547 ADAMTS12P58397 1594 aa23.76■■□□□ 1.39
MRVI1-208ENST00000529547 NUP160Q12769 1436 aa23.74■■□□□ 1.39
MRVI1-208ENST00000529547 ERICH3Q5RHP9 1530 aa23.73■■□□□ 1.39
MRVI1-208ENST00000529547 CEP170Q5SW79 1584 aa23.69■■□□□ 1.38
MRVI1-208ENST00000529547 ERCC6L2Q5T890 1561 aa23.64■■□□□ 1.37
MRVI1-208ENST00000529547 IGF1RP08069 1367 aa23.59■■□□□ 1.37
MRVI1-208ENST00000529547 JPH4Q96JJ6 628 aa23.58■■□□□ 1.37
MRVI1-208ENST00000529547 KIF27Q86VH2 1401 aa23.57■■□□□ 1.36
MRVI1-208ENST00000529547 PRG4Q92954 1404 aaPredicted RBP23.53■■□□□ 1.36
MRVI1-208ENST00000529547 SHROOM2Q13796 1616 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms