RNA–Protein interactions for RNA: ENST00000529505.1

SMIM19-208, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 920 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-208ENST00000529505 NISCHQ9Y2I1 1504 aa51.35■■■■■ 5.81
SMIM19-208ENST00000529505 CCDC180Q9P1Z9 1646 aa46.04■■■■■ 4.96
SMIM19-208ENST00000529505 ABCC9O60706 1549 aa45.77■■■■■ 4.92
SMIM19-208ENST00000529505 RB1CC1Q8TDY2 1594 aa43.69■■■■■ 4.58
SMIM19-208ENST00000529505 NACADO15069 1562 aa43.46■■■■■ 4.55
SMIM19-208ENST00000529505 DCAF8L2P0C7V8 631 aa43.06■■■■■ 4.48
SMIM19-208ENST00000529505 MYO15BQ96JP2 1530 aa42.98■■■■■ 4.47
SMIM19-208ENST00000529505 DNAJC5BQ9UF47 199 aa42.78■■■■■ 4.44
SMIM19-208ENST00000529505 UNC13AQ9UPW8 1703 aa42.74■■■■■ 4.43
SMIM19-208ENST00000529505 ZCCHC6Q5VYS8 1495 aaKnown RBP42.62■■■■■ 4.41
SMIM19-208ENST00000529505 PABPN1Q86U42 306 aaKnown RBP eCLIP42.59■■■■■ 4.41
SMIM19-208ENST00000529505 DCAF1Q9Y4B6 1507 aa42.48■■■■■ 4.39
SMIM19-208ENST00000529505 BICRAQ9NZM4 1560 aa42.46■■■■■ 4.39
SMIM19-208ENST00000529505 SHROOM4Q9ULL8 1493 aa41.94■■■■■ 4.3
SMIM19-208ENST00000529505 SCRIBQ14160 1630 aa41.88■■■■■ 4.3
SMIM19-208ENST00000529505 CC2D2AQ9P2K1 1620 aa41.4■■■■■ 4.22
SMIM19-208ENST00000529505 EIF4G1Q04637 1599 aaKnown RBP41.37■■■■■ 4.21
SMIM19-208ENST00000529505 CECR2Q9BXF3 1484 aa41.23■■■■■ 4.19
SMIM19-208ENST00000529505 NCAPD3P42695 1498 aa40.12■■■■■ 4.01
SMIM19-208ENST00000529505 SMARCA4P51532 1647 aa40.02■■■■■ 4
SMIM19-208ENST00000529505 ATAD2BQ9ULI0 1458 aa40■■■■□ 3.99
SMIM19-208ENST00000529505 SMARCA2P51531 1590 aa39.92■■■■□ 3.98
SMIM19-208ENST00000529505 HMGXB3Q12766 1538 aa39.86■■■■□ 3.97
SMIM19-208ENST00000529505 BAZ1AQ9NRL2 1556 aaPredicted RBP39.84■■■■□ 3.97
SMIM19-208ENST00000529505 PEG3Q9GZU2 1588 aa39.68■■■■□ 3.94
SMIM19-208ENST00000529505 BAZ1BQ9UIG0 1483 aaKnown RBP39.6■■■■□ 3.93
SMIM19-208ENST00000529505 MROH2BQ7Z745 1585 aa39.56■■■■□ 3.92
SMIM19-208ENST00000529505 ERCC6Q03468 1493 aa39.49■■■■□ 3.91
SMIM19-208ENST00000529505 CUX2O14529 1486 aa39.43■■■■□ 3.9
SMIM19-208ENST00000529505 NESP48681 1621 aa39.39■■■■□ 3.9
SMIM19-208ENST00000529505 LAMC3Q9Y6N6 1575 aa39.18■■■■□ 3.86
SMIM19-208ENST00000529505 DNAJC5Q9H3Z4 198 aa39.16■■■■□ 3.86
SMIM19-208ENST00000529505 WIZO95785 1651 aa39.08■■■■□ 3.85
SMIM19-208ENST00000529505 THOC2Q8NI27 1593 aaKnown RBP39.02■■■■□ 3.84
SMIM19-208ENST00000529505 KIF21AQ7Z4S6 1674 aa38.91■■■■□ 3.82
SMIM19-208ENST00000529505 PDS5BQ9NTI5 1447 aa38.9■■■■□ 3.82
SMIM19-208ENST00000529505 CADPSQ9ULU8 1353 aa38.87■■■■□ 3.81
SMIM19-208ENST00000529505 RSF1Q96T23 1441 aaPredicted RBP38.8■■■■□ 3.8
SMIM19-208ENST00000529505 TOP2AP11388 1531 aaKnown RBP38.63■■■■□ 3.77
SMIM19-208ENST00000529505 MRC2Q9UBG0 1479 aa38.59■■■■□ 3.77
SMIM19-208ENST00000529505 WDR62O43379 1518 aa38.52■■■■□ 3.76
SMIM19-208ENST00000529505 CFTRP13569 1480 aa38.5■■■■□ 3.75
SMIM19-208ENST00000529505 CEP164Q9UPV0 1460 aa38.46■■■■□ 3.75
SMIM19-208ENST00000529505 FANCD2Q9BXW9 1451 aa38.43■■■■□ 3.74
SMIM19-208ENST00000529505 CCDC88BA6NC98 1476 aa38.15■■■■□ 3.7
SMIM19-208ENST00000529505 PRDM2Q13029 1718 aa38.15■■■■□ 3.7
SMIM19-208ENST00000529505 URB2Q14146 1524 aaKnown RBP38.12■■■■□ 3.69
SMIM19-208ENST00000529505 SUPT5HO00267 1087 aaKnown RBP37.74■■■■□ 3.63
SMIM19-208ENST00000529505 TOPBP1Q92547 1522 aa37.74■■■■□ 3.63
SMIM19-208ENST00000529505 IFT140Q96RY7 1462 aa37.7■■■■□ 3.63
SMIM19-208ENST00000529505 ABCC8Q09428 1581 aa37.67■■■■□ 3.62
SMIM19-208ENST00000529505 DNMBPQ6XZF7 1577 aa37.63■■■■□ 3.61
SMIM19-208ENST00000529505 ZNF608Q9ULD9 1512 aaPredicted RBP37.61■■■■□ 3.61
SMIM19-208ENST00000529505 OSCARQ8IYS5 282 aa37.58■■■■□ 3.61
SMIM19-208ENST00000529505 EIF4G3O43432 1585 aaKnown RBP37.43■■■■□ 3.58
SMIM19-208ENST00000529505 TARBP1Q13395 1621 aaKnown RBP37.42■■■■□ 3.58
SMIM19-208ENST00000529505 TRIM41Q8WV44 630 aa37.41■■■■□ 3.58
SMIM19-208ENST00000529505 POLA1P09884 1462 aaPredicted RBP37.37■■■■□ 3.57
SMIM19-208ENST00000529505 AQRO60306 1485 aaKnown RBP eCLIP37.26■■■■□ 3.55
SMIM19-208ENST00000529505 RAD54L2Q9Y4B4 1467 aa37.2■■■■□ 3.54
SMIM19-208ENST00000529505 CUX1P39880 1505 aa37.16■■■■□ 3.54
SMIM19-208ENST00000529505 SOGA1O94964 1423 aa37.16■■■■□ 3.54
SMIM19-208ENST00000529505 FGD5Q6ZNL6 1462 aa37.14■■■■□ 3.54
SMIM19-208ENST00000529505 RIMBP3CA6NJZ7 1639 aa37.14■■■■□ 3.54
SMIM19-208ENST00000529505 RIMBP3BA6NNM3 1639 aa37.14■■■■□ 3.54
SMIM19-208ENST00000529505 RIMBP3Q9UFD9 1639 aa37.14■■■■□ 3.54
SMIM19-208ENST00000529505 CHD1O14646 1710 aa37.11■■■■□ 3.53
SMIM19-208ENST00000529505 WDR97A6NE52 1622 aa37.08■■■■□ 3.53
SMIM19-208ENST00000529505 TDRD9Q8NDG6 1382 aaKnown RBP37.04■■■■□ 3.52
SMIM19-208ENST00000529505 ARHGEF11O15085 1522 aa37.04■■■■□ 3.52
SMIM19-208ENST00000529505 SNAPC4Q5SXM2 1469 aa36.91■■■■□ 3.5
SMIM19-208ENST00000529505 FBLN2P98095 1184 aa36.88■■■■□ 3.49
SMIM19-208ENST00000529505 MAGI1Q96QZ7 1491 aaPredicted RBP36.85■■■■□ 3.49
SMIM19-208ENST00000529505 GRIN2BQ13224 1484 aa36.84■■■■□ 3.49
SMIM19-208ENST00000529505 ABCA10Q8WWZ4 1543 aa36.76■■■■□ 3.48
SMIM19-208ENST00000529505 GAPVD1Q14C86 1478 aa36.73■■■■□ 3.47
SMIM19-208ENST00000529505 CLASP1Q7Z460 1538 aa36.73■■■■□ 3.47
SMIM19-208ENST00000529505 PBRM1Q86U86 1689 aa36.73■■■■□ 3.47
SMIM19-208ENST00000529505 ABCA5Q8WWZ7 1642 aa36.71■■■■□ 3.47
SMIM19-208ENST00000529505 SYNJ2O15056 1496 aa36.71■■■■□ 3.47
SMIM19-208ENST00000529505 ARAP1Q96P48 1450 aa36.7■■■■□ 3.47
SMIM19-208ENST00000529505 CHMP7Q8WUX9 453 aaPredicted RBP36.69■■■■□ 3.46
SMIM19-208ENST00000529505 SYNJ1O43426 1573 aa36.68■■■■□ 3.46
SMIM19-208ENST00000529505 CYB5RLQ6IPT4 315 aa36.66■■■■□ 3.46
SMIM19-208ENST00000529505 BIVM-ERCC5R4GMW8 1640 aa36.64■■■■□ 3.46
SMIM19-208ENST00000529505 TOP2BQ02880 1626 aa36.62■■■■□ 3.45
SMIM19-208ENST00000529505 WRNQ14191 1432 aaPredicted RBP eCLIP36.6■■■■□ 3.45
SMIM19-208ENST00000529505 ADAMTS12P58397 1594 aa36.41■■■■□ 3.42
SMIM19-208ENST00000529505 GRIN2AQ12879 1464 aa36.38■■■■□ 3.41
SMIM19-208ENST00000529505 ERICH3Q5RHP9 1530 aa36.3■■■■□ 3.4
SMIM19-208ENST00000529505 FHAD1B1AJZ9 1412 aa36.28■■■■□ 3.4
SMIM19-208ENST00000529505 NUP160Q12769 1436 aa36.28■■■■□ 3.4
SMIM19-208ENST00000529505 CEP170Q5SW79 1584 aa36.26■■■■□ 3.39
SMIM19-208ENST00000529505 TRHP20396 242 aaPredicted RBP36.14■■■■□ 3.38
SMIM19-208ENST00000529505 ERCC6L2Q5T890 1561 aa36.13■■■■□ 3.37
SMIM19-208ENST00000529505 SHROOM2Q13796 1616 aa36.12■■■■□ 3.37
SMIM19-208ENST00000529505 RUSC2Q8N2Y8 1516 aa35.9■■■■□ 3.34
SMIM19-208ENST00000529505 KIF27Q86VH2 1401 aa35.87■■■■□ 3.33
SMIM19-208ENST00000529505 PRG4Q92954 1404 aaPredicted RBP35.85■■■■□ 3.33
SMIM19-208ENST00000529505 IGF1RP08069 1367 aa35.84■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms