RNA–Protein interactions for RNA: ENST00000529500.1

PSMC3-206, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 563 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-206ENST00000529500 NISCHQ9Y2I1 1504 aa31.76■■■□□ 2.68
PSMC3-206ENST00000529500 CCDC180Q9P1Z9 1646 aa28.21■■■□□ 2.11
PSMC3-206ENST00000529500 ABCC9O60706 1549 aa27.85■■■□□ 2.05
PSMC3-206ENST00000529500 DCAF8L2P0C7V8 631 aa26.82■■□□□ 1.88
PSMC3-206ENST00000529500 RB1CC1Q8TDY2 1594 aa26.71■■□□□ 1.87
PSMC3-206ENST00000529500 NACADO15069 1562 aa26.66■■□□□ 1.86
PSMC3-206ENST00000529500 MYO15BQ96JP2 1530 aa26.45■■□□□ 1.83
PSMC3-206ENST00000529500 ZCCHC6Q5VYS8 1495 aaKnown RBP26.38■■□□□ 1.81
PSMC3-206ENST00000529500 DCAF1Q9Y4B6 1507 aa26.27■■□□□ 1.8
PSMC3-206ENST00000529500 PABPN1Q86U42 306 aaKnown RBP eCLIP26.09■■□□□ 1.77
PSMC3-206ENST00000529500 UNC13AQ9UPW8 1703 aa25.91■■□□□ 1.74
PSMC3-206ENST00000529500 BICRAQ9NZM4 1560 aa25.82■■□□□ 1.72
PSMC3-206ENST00000529500 SCRIBQ14160 1630 aa25.74■■□□□ 1.71
PSMC3-206ENST00000529500 DNAJC5BQ9UF47 199 aa25.74■■□□□ 1.71
PSMC3-206ENST00000529500 SHROOM4Q9ULL8 1493 aa25.64■■□□□ 1.69
PSMC3-206ENST00000529500 EIF4G1Q04637 1599 aaKnown RBP25.2■■□□□ 1.62
PSMC3-206ENST00000529500 CC2D2AQ9P2K1 1620 aa25.12■■□□□ 1.61
PSMC3-206ENST00000529500 CECR2Q9BXF3 1484 aa25.07■■□□□ 1.6
PSMC3-206ENST00000529500 NCAPD3P42695 1498 aa24.64■■□□□ 1.53
PSMC3-206ENST00000529500 BAZ1AQ9NRL2 1556 aaPredicted RBP24.63■■□□□ 1.53
PSMC3-206ENST00000529500 SMARCA4P51532 1647 aa24.61■■□□□ 1.53
PSMC3-206ENST00000529500 ATAD2BQ9ULI0 1458 aa24.6■■□□□ 1.53
PSMC3-206ENST00000529500 SMARCA2P51531 1590 aa24.56■■□□□ 1.52
PSMC3-206ENST00000529500 MROH2BQ7Z745 1585 aa24.44■■□□□ 1.5
PSMC3-206ENST00000529500 HMGXB3Q12766 1538 aa24.42■■□□□ 1.5
PSMC3-206ENST00000529500 BAZ1BQ9UIG0 1483 aaKnown RBP24.4■■□□□ 1.5
PSMC3-206ENST00000529500 PEG3Q9GZU2 1588 aa24.38■■□□□ 1.49
PSMC3-206ENST00000529500 DNAJC5Q9H3Z4 198 aa24.31■■□□□ 1.48
PSMC3-206ENST00000529500 SUPT5HO00267 1087 aaKnown RBP24.22■■□□□ 1.47
PSMC3-206ENST00000529500 RSF1Q96T23 1441 aaPredicted RBP24.18■■□□□ 1.46
PSMC3-206ENST00000529500 WIZO95785 1651 aa24.13■■□□□ 1.45
PSMC3-206ENST00000529500 ERCC6Q03468 1493 aa24.07■■□□□ 1.44
PSMC3-206ENST00000529500 NESP48681 1621 aa24.02■■□□□ 1.44
PSMC3-206ENST00000529500 LAMC3Q9Y6N6 1575 aa23.95■■□□□ 1.43
PSMC3-206ENST00000529500 CADPSQ9ULU8 1353 aa23.95■■□□□ 1.42
PSMC3-206ENST00000529500 PDS5BQ9NTI5 1447 aa23.92■■□□□ 1.42
PSMC3-206ENST00000529500 TOP2AP11388 1531 aaKnown RBP23.9■■□□□ 1.42
PSMC3-206ENST00000529500 CUX2O14529 1486 aa23.84■■□□□ 1.41
PSMC3-206ENST00000529500 CFTRP13569 1480 aa23.72■■□□□ 1.39
PSMC3-206ENST00000529500 CCDC88BA6NC98 1476 aa23.68■■□□□ 1.38
PSMC3-206ENST00000529500 KIF21AQ7Z4S6 1674 aa23.64■■□□□ 1.37
PSMC3-206ENST00000529500 FANCD2Q9BXW9 1451 aa23.62■■□□□ 1.37
PSMC3-206ENST00000529500 CEP164Q9UPV0 1460 aa23.6■■□□□ 1.37
PSMC3-206ENST00000529500 THOC2Q8NI27 1593 aaKnown RBP23.6■■□□□ 1.37
PSMC3-206ENST00000529500 MRC2Q9UBG0 1479 aa23.59■■□□□ 1.37
PSMC3-206ENST00000529500 CHIC1Q5VXU3 224 aa23.46■■□□□ 1.35
PSMC3-206ENST00000529500 WDR62O43379 1518 aa23.45■■□□□ 1.34
PSMC3-206ENST00000529500 URB2Q14146 1524 aaKnown RBP23.34■■□□□ 1.33
PSMC3-206ENST00000529500 PRDM2Q13029 1718 aa23.33■■□□□ 1.33
PSMC3-206ENST00000529500 ABCC8Q09428 1581 aa23.28■■□□□ 1.32
PSMC3-206ENST00000529500 TOPBP1Q92547 1522 aa23.19■■□□□ 1.3
PSMC3-206ENST00000529500 DNMBPQ6XZF7 1577 aa23.14■■□□□ 1.29
PSMC3-206ENST00000529500 IFT140Q96RY7 1462 aa23.13■■□□□ 1.29
PSMC3-206ENST00000529500 POLA1P09884 1462 aaPredicted RBP22.99■■□□□ 1.27
PSMC3-206ENST00000529500 SOGA1O94964 1423 aa22.99■■□□□ 1.27
PSMC3-206ENST00000529500 OSCARQ8IYS5 282 aa22.98■■□□□ 1.27
PSMC3-206ENST00000529500 ZNF608Q9ULD9 1512 aaPredicted RBP22.98■■□□□ 1.27
PSMC3-206ENST00000529500 CUX1P39880 1505 aa22.93■■□□□ 1.26
PSMC3-206ENST00000529500 FGD5Q6ZNL6 1462 aa22.92■■□□□ 1.26
PSMC3-206ENST00000529500 RAD54L2Q9Y4B4 1467 aa22.91■■□□□ 1.26
PSMC3-206ENST00000529500 AQRO60306 1485 aaKnown RBP eCLIP22.9■■□□□ 1.269e-9■■■■□ 20.2
PSMC3-206ENST00000529500 TARBP1Q13395 1621 aaKnown RBP22.89■■□□□ 1.25
PSMC3-206ENST00000529500 TDRD9Q8NDG6 1382 aaKnown RBP22.87■■□□□ 1.25
PSMC3-206ENST00000529500 TRIM41Q8WV44 630 aa22.84■■□□□ 1.25
PSMC3-206ENST00000529500 WRNQ14191 1432 aaPredicted RBP eCLIP22.82■■□□□ 1.24
PSMC3-206ENST00000529500 EIF4G3O43432 1585 aaKnown RBP22.81■■□□□ 1.24
PSMC3-206ENST00000529500 FBLN2P98095 1184 aa22.78■■□□□ 1.24
PSMC3-206ENST00000529500 WDR97A6NE52 1622 aa22.75■■□□□ 1.23
PSMC3-206ENST00000529500 CHMP7Q8WUX9 453 aaPredicted RBP22.7■■□□□ 1.22
PSMC3-206ENST00000529500 GRIN2BQ13224 1484 aa22.7■■□□□ 1.22
PSMC3-206ENST00000529500 ABCA10Q8WWZ4 1543 aa22.7■■□□□ 1.22
PSMC3-206ENST00000529500 TOP2BQ02880 1626 aa22.7■■□□□ 1.22
PSMC3-206ENST00000529500 GAPVD1Q14C86 1478 aa22.68■■□□□ 1.22
PSMC3-206ENST00000529500 BIVM-ERCC5R4GMW8 1640 aa22.64■■□□□ 1.22
PSMC3-206ENST00000529500 SYNJ1O43426 1573 aa22.64■■□□□ 1.22
PSMC3-206ENST00000529500 SNAPC4Q5SXM2 1469 aa22.63■■□□□ 1.21
PSMC3-206ENST00000529500 MAGI1Q96QZ7 1491 aaPredicted RBP22.63■■□□□ 1.21
PSMC3-206ENST00000529500 SYNJ2O15056 1496 aa22.55■■□□□ 1.2
PSMC3-206ENST00000529500 CHD1O14646 1710 aa22.52■■□□□ 1.2
PSMC3-206ENST00000529500 ABCA5Q8WWZ7 1642 aa22.52■■□□□ 1.2
PSMC3-206ENST00000529500 LOC105371045A0A1W2PR82 267 aa22.48■■□□□ 1.19
PSMC3-206ENST00000529500 PBRM1Q86U86 1689 aa22.47■■□□□ 1.19
PSMC3-206ENST00000529500 ERICH3Q5RHP9 1530 aa22.43■■□□□ 1.18
PSMC3-206ENST00000529500 FHAD1B1AJZ9 1412 aa22.43■■□□□ 1.18
PSMC3-206ENST00000529500 ARHGEF11O15085 1522 aa22.41■■□□□ 1.18
PSMC3-206ENST00000529500 KIF27Q86VH2 1401 aa22.4■■□□□ 1.18
PSMC3-206ENST00000529500 RIMBP3CA6NJZ7 1639 aa22.39■■□□□ 1.17
PSMC3-206ENST00000529500 RIMBP3BA6NNM3 1639 aa22.39■■□□□ 1.17
PSMC3-206ENST00000529500 RIMBP3Q9UFD9 1639 aa22.39■■□□□ 1.17
PSMC3-206ENST00000529500 CYB5RLQ6IPT4 315 aa22.38■■□□□ 1.17
PSMC3-206ENST00000529500 GRIN2AQ12879 1464 aa22.36■■□□□ 1.17
PSMC3-206ENST00000529500 EEA1Q15075 1411 aa22.35■■□□□ 1.17
PSMC3-206ENST00000529500 CLASP1Q7Z460 1538 aa22.33■■□□□ 1.17
PSMC3-206ENST00000529500 IGF1RP08069 1367 aa22.33■■□□□ 1.17
PSMC3-206ENST00000529500 ADAMTS12P58397 1594 aa22.33■■□□□ 1.16
PSMC3-206ENST00000529500 FAM9AQ8IZU1 332 aaPredicted RBP22.31■■□□□ 1.16
PSMC3-206ENST00000529500 NUP160Q12769 1436 aa22.27■■□□□ 1.16
PSMC3-206ENST00000529500 ARAP1Q96P48 1450 aa22.22■■□□□ 1.15
PSMC3-206ENST00000529500 CARMIL1Q5VZK9 1371 aa22.21■■□□□ 1.15
PSMC3-206ENST00000529500 JPH4Q96JJ6 628 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms