RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 AEBP2Q6ZN18 517 aaPredicted RBP16.08■□□□□ 0.16
CHRNA6-202ENST00000529467 NISCHQ9Y2I1 1504 aa15.67■□□□□ 0.1
CHRNA6-202ENST00000529467 CHIC1Q5VXU3 224 aa15.24■□□□□ 0.03
CHRNA6-202ENST00000529467 ABCC9O60706 1549 aa14.21□□□□□ -0.13
CHRNA6-202ENST00000529467 CCDC180Q9P1Z9 1646 aa14.08□□□□□ -0.16
CHRNA6-202ENST00000529467 SENP3Q9H4L4 574 aaPredicted RBP13.74□□□□□ -0.21
CHRNA6-202ENST00000529467 PHF23Q9BUL5 403 aaPredicted RBP13.51□□□□□ -0.25
CHRNA6-202ENST00000529467 DNAJC5BQ9UF47 199 aa13.51□□□□□ -0.25
CHRNA6-202ENST00000529467 RB1CC1Q8TDY2 1594 aa13.46□□□□□ -0.25
CHRNA6-202ENST00000529467 NACADO15069 1562 aa13.36□□□□□ -0.27
CHRNA6-202ENST00000529467 DCAF8L2P0C7V8 631 aa13.3□□□□□ -0.28
CHRNA6-202ENST00000529467 PABPN1Q86U42 306 aaKnown RBP eCLIP13.25□□□□□ -0.29
CHRNA6-202ENST00000529467 UNC13AQ9UPW8 1703 aa13.19□□□□□ -0.3
CHRNA6-202ENST00000529467 MYO15BQ96JP2 1530 aa13.15□□□□□ -0.3
CHRNA6-202ENST00000529467 BICRAQ9NZM4 1560 aa13.11□□□□□ -0.31
CHRNA6-202ENST00000529467 ZCCHC6Q5VYS8 1495 aaKnown RBP12.94□□□□□ -0.34
CHRNA6-202ENST00000529467 DCAF1Q9Y4B6 1507 aa12.93□□□□□ -0.34
CHRNA6-202ENST00000529467 SHROOM4Q9ULL8 1493 aa12.88□□□□□ -0.35
CHRNA6-202ENST00000529467 CC2D2AQ9P2K1 1620 aa12.84□□□□□ -0.35
CHRNA6-202ENST00000529467 SCRIBQ14160 1630 aa12.81□□□□□ -0.36
CHRNA6-202ENST00000529467 CECR2Q9BXF3 1484 aa12.81□□□□□ -0.36
CHRNA6-202ENST00000529467 FOXD1Q16676 465 aa12.79□□□□□ -0.36
CHRNA6-202ENST00000529467 EIF4G1Q04637 1599 aaKnown RBP12.77□□□□□ -0.36
CHRNA6-202ENST00000529467 DNAJC5Q9H3Z4 198 aa12.47□□□□□ -0.41
CHRNA6-202ENST00000529467 NCAPD3P42695 1498 aa12.36□□□□□ -0.43
CHRNA6-202ENST00000529467 POTEDQ86YR6 584 aa12.3□□□□□ -0.44
CHRNA6-202ENST00000529467 CUX2O14529 1486 aa12.29□□□□□ -0.44
CHRNA6-202ENST00000529467 ATAD2BQ9ULI0 1458 aa12.29□□□□□ -0.44
CHRNA6-202ENST00000529467 ERCC6Q03468 1493 aa12.25□□□□□ -0.45
CHRNA6-202ENST00000529467 SMARCA4P51532 1647 aa12.23□□□□□ -0.45
CHRNA6-202ENST00000529467 SMARCA2P51531 1590 aa12.22□□□□□ -0.45
CHRNA6-202ENST00000529467 HMGXB3Q12766 1538 aa12.21□□□□□ -0.45
CHRNA6-202ENST00000529467 NESP48681 1621 aa12.19□□□□□ -0.46
CHRNA6-202ENST00000529467 BAZ1AQ9NRL2 1556 aaPredicted RBP12.15□□□□□ -0.46
CHRNA6-202ENST00000529467 BAZ1BQ9UIG0 1483 aaKnown RBP12.14□□□□□ -0.47
CHRNA6-202ENST00000529467 PLPPR3Q6T4P5 718 aa12.13□□□□□ -0.47
CHRNA6-202ENST00000529467 PEG3Q9GZU2 1588 aa12.13□□□□□ -0.47
CHRNA6-202ENST00000529467 MROH2BQ7Z745 1585 aa12.08□□□□□ -0.48
CHRNA6-202ENST00000529467 LAMC3Q9Y6N6 1575 aa12.07□□□□□ -0.48
CHRNA6-202ENST00000529467 THOC2Q8NI27 1593 aaKnown RBP12.06□□□□□ -0.48
CHRNA6-202ENST00000529467 MSH5O43196 834 aa12.02□□□□□ -0.49
CHRNA6-202ENST00000529467 KIF21AQ7Z4S6 1674 aa12.01□□□□□ -0.49
CHRNA6-202ENST00000529467 PDS5BQ9NTI5 1447 aa12.01□□□□□ -0.49
CHRNA6-202ENST00000529467 CADPSQ9ULU8 1353 aa11.98□□□□□ -0.49
CHRNA6-202ENST00000529467 WIZO95785 1651 aa11.92□□□□□ -0.5
CHRNA6-202ENST00000529467 MRC2Q9UBG0 1479 aa11.9□□□□□ -0.5
CHRNA6-202ENST00000529467 PIAS4Q8N2W9 510 aaPredicted RBP11.89□□□□□ -0.51
CHRNA6-202ENST00000529467 PPP6R1Q9UPN7 881 aa11.89□□□□□ -0.51
CHRNA6-202ENST00000529467 WDR62O43379 1518 aa11.87□□□□□ -0.51
CHRNA6-202ENST00000529467 TRIM41Q8WV44 630 aa11.84□□□□□ -0.51
CHRNA6-202ENST00000529467 FANCD2Q9BXW9 1451 aa11.82□□□□□ -0.52
CHRNA6-202ENST00000529467 CEP164Q9UPV0 1460 aa11.82□□□□□ -0.52
CHRNA6-202ENST00000529467 ADRA2BP18089 450 aa11.81□□□□□ -0.52
CHRNA6-202ENST00000529467 CFTRP13569 1480 aa11.81□□□□□ -0.52
CHRNA6-202ENST00000529467 RSF1Q96T23 1441 aaPredicted RBP11.8□□□□□ -0.52
CHRNA6-202ENST00000529467 OSCARQ8IYS5 282 aa11.76□□□□□ -0.53
CHRNA6-202ENST00000529467 TOP2AP11388 1531 aaKnown RBP11.74□□□□□ -0.53
CHRNA6-202ENST00000529467 URB2Q14146 1524 aaKnown RBP11.74□□□□□ -0.53
CHRNA6-202ENST00000529467 PRDM2Q13029 1718 aa11.65□□□□□ -0.54
CHRNA6-202ENST00000529467 CCDC88BA6NC98 1476 aa11.64□□□□□ -0.55
CHRNA6-202ENST00000529467 ZNF608Q9ULD9 1512 aaPredicted RBP11.61□□□□□ -0.55
CHRNA6-202ENST00000529467 IFT140Q96RY7 1462 aa11.61□□□□□ -0.55
CHRNA6-202ENST00000529467 TOPBP1Q92547 1522 aa11.59□□□□□ -0.55
CHRNA6-202ENST00000529467 RIMBP3CA6NJZ7 1639 aa11.57□□□□□ -0.56
CHRNA6-202ENST00000529467 RIMBP3BA6NNM3 1639 aa11.57□□□□□ -0.56
CHRNA6-202ENST00000529467 RIMBP3Q9UFD9 1639 aa11.57□□□□□ -0.56
CHRNA6-202ENST00000529467 ABCC8Q09428 1581 aa11.55□□□□□ -0.56
CHRNA6-202ENST00000529467 ARHGEF11O15085 1522 aa11.52□□□□□ -0.57
CHRNA6-202ENST00000529467 DNMBPQ6XZF7 1577 aa11.52□□□□□ -0.57
CHRNA6-202ENST00000529467 AQRO60306 1485 aaKnown RBP eCLIP11.51□□□□□ -0.57
CHRNA6-202ENST00000529467 EIF4G3O43432 1585 aaKnown RBP11.5□□□□□ -0.57
CHRNA6-202ENST00000529467 TARBP1Q13395 1621 aaKnown RBP11.49□□□□□ -0.57
CHRNA6-202ENST00000529467 CYB5RLQ6IPT4 315 aa11.48□□□□□ -0.57
CHRNA6-202ENST00000529467 CHD1O14646 1710 aa11.46□□□□□ -0.58
CHRNA6-202ENST00000529467 POLA1P09884 1462 aaPredicted RBP11.45□□□□□ -0.58
CHRNA6-202ENST00000529467 FBLN2P98095 1184 aa11.44□□□□□ -0.58
CHRNA6-202ENST00000529467 RAD54L2Q9Y4B4 1467 aa11.44□□□□□ -0.58
CHRNA6-202ENST00000529467 SOGA1O94964 1423 aa11.42□□□□□ -0.58
CHRNA6-202ENST00000529467 TDRD9Q8NDG6 1382 aaKnown RBP11.41□□□□□ -0.58
CHRNA6-202ENST00000529467 ARAP1Q96P48 1450 aa11.41□□□□□ -0.58
CHRNA6-202ENST00000529467 TRHP20396 242 aaPredicted RBP11.37□□□□□ -0.59
CHRNA6-202ENST00000529467 FGD5Q6ZNL6 1462 aa11.37□□□□□ -0.59
CHRNA6-202ENST00000529467 CHMP7Q8WUX9 453 aaPredicted RBP11.35□□□□□ -0.59
CHRNA6-202ENST00000529467 SNAPC4Q5SXM2 1469 aa11.35□□□□□ -0.59
CHRNA6-202ENST00000529467 WDR97A6NE52 1622 aa11.35□□□□□ -0.59
CHRNA6-202ENST00000529467 CUX1P39880 1505 aa11.35□□□□□ -0.59
CHRNA6-202ENST00000529467 CLASP1Q7Z460 1538 aa11.33□□□□□ -0.6
CHRNA6-202ENST00000529467 GRIN2BQ13224 1484 aa11.32□□□□□ -0.6
CHRNA6-202ENST00000529467 MAGI1Q96QZ7 1491 aaPredicted RBP11.32□□□□□ -0.6
CHRNA6-202ENST00000529467 SYNJ1O43426 1573 aa11.29□□□□□ -0.6
CHRNA6-202ENST00000529467 SYNJ2O15056 1496 aa11.29□□□□□ -0.6
CHRNA6-202ENST00000529467 GAPVD1Q14C86 1478 aa11.26□□□□□ -0.61
CHRNA6-202ENST00000529467 PBRM1Q86U86 1689 aa11.24□□□□□ -0.61
CHRNA6-202ENST00000529467 ABCA10Q8WWZ4 1543 aa11.24□□□□□ -0.61
CHRNA6-202ENST00000529467 ABCA5Q8WWZ7 1642 aa11.2□□□□□ -0.62
CHRNA6-202ENST00000529467 SUPT5HO00267 1087 aaKnown RBP11.19□□□□□ -0.62
CHRNA6-202ENST00000529467 WRNQ14191 1432 aaPredicted RBP eCLIP11.17□□□□□ -0.62
CHRNA6-202ENST00000529467 GRIN2AQ12879 1464 aa11.16□□□□□ -0.62
CHRNA6-202ENST00000529467 ERCC6L2Q5T890 1561 aa11.16□□□□□ -0.62
CHRNA6-202ENST00000529467 NUP160Q12769 1436 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms