RNA–Protein interactions for RNA: ENST00000529442.6

ABCA7-211, Transcript of ATP binding cassette subfamily A member 7, humanhuman

TSL 4

Gene ABCA7, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA7-211ENST00000529442 NISCHQ9Y2I1 1504 aa27.34■■□□□ 1.97
ABCA7-211ENST00000529442 CCDC180Q9P1Z9 1646 aa24.49■■□□□ 1.51
ABCA7-211ENST00000529442 ABCC9O60706 1549 aa23.76■■□□□ 1.39
ABCA7-211ENST00000529442 RB1CC1Q8TDY2 1594 aa23.01■■□□□ 1.27
ABCA7-211ENST00000529442 NACADO15069 1562 aa22.98■■□□□ 1.27
ABCA7-211ENST00000529442 MYO15BQ96JP2 1530 aa22.88■■□□□ 1.25
ABCA7-211ENST00000529442 ZCCHC6Q5VYS8 1495 aaKnown RBP22.77■■□□□ 1.24
ABCA7-211ENST00000529442 DCAF1Q9Y4B6 1507 aa22.74■■□□□ 1.23
ABCA7-211ENST00000529442 DCAF8L2P0C7V8 631 aa22.66■■□□□ 1.22
ABCA7-211ENST00000529442 UNC13AQ9UPW8 1703 aa22.53■■□□□ 1.2
ABCA7-211ENST00000529442 BICRAQ9NZM4 1560 aa22.25■■□□□ 1.15
ABCA7-211ENST00000529442 SHROOM4Q9ULL8 1493 aa22.17■■□□□ 1.14
ABCA7-211ENST00000529442 SCRIBQ14160 1630 aa22.13■■□□□ 1.13
ABCA7-211ENST00000529442 PABPN1Q86U42 306 aaKnown RBP eCLIP22.11■■□□□ 1.139e-7■■□□□ 13.1
ABCA7-211ENST00000529442 DNAJC5BQ9UF47 199 aa21.79■■□□□ 1.08
ABCA7-211ENST00000529442 EIF4G1Q04637 1599 aaKnown RBP21.68■■□□□ 1.06
ABCA7-211ENST00000529442 CC2D2AQ9P2K1 1620 aa21.59■■□□□ 1.05
ABCA7-211ENST00000529442 CECR2Q9BXF3 1484 aa21.41■■□□□ 1.02
ABCA7-211ENST00000529442 SMARCA4P51532 1647 aa21.26■□□□□ 0.99
ABCA7-211ENST00000529442 BAZ1AQ9NRL2 1556 aaPredicted RBP21.24■□□□□ 0.99
ABCA7-211ENST00000529442 SMARCA2P51531 1590 aa21.17■□□□□ 0.98
ABCA7-211ENST00000529442 NCAPD3P42695 1498 aa21.15■□□□□ 0.98
ABCA7-211ENST00000529442 PEG3Q9GZU2 1588 aa21.12■□□□□ 0.97
ABCA7-211ENST00000529442 ATAD2BQ9ULI0 1458 aa21.11■□□□□ 0.97
ABCA7-211ENST00000529442 HMGXB3Q12766 1538 aa21.09■□□□□ 0.97
ABCA7-211ENST00000529442 MROH2BQ7Z745 1585 aa21.01■□□□□ 0.95
ABCA7-211ENST00000529442 BAZ1BQ9UIG0 1483 aaKnown RBP20.94■□□□□ 0.94
ABCA7-211ENST00000529442 WIZO95785 1651 aa20.81■□□□□ 0.92
ABCA7-211ENST00000529442 RSF1Q96T23 1441 aaPredicted RBP20.74■□□□□ 0.91
ABCA7-211ENST00000529442 LAMC3Q9Y6N6 1575 aa20.67■□□□□ 0.9
ABCA7-211ENST00000529442 TOP2AP11388 1531 aaKnown RBP20.63■□□□□ 0.89
ABCA7-211ENST00000529442 ERCC6Q03468 1493 aa20.54■□□□□ 0.88
ABCA7-211ENST00000529442 NESP48681 1621 aa20.53■□□□□ 0.88
ABCA7-211ENST00000529442 CADPSQ9ULU8 1353 aa20.49■□□□□ 0.87
ABCA7-211ENST00000529442 PDS5BQ9NTI5 1447 aa20.46■□□□□ 0.87
ABCA7-211ENST00000529442 CUX2O14529 1486 aa20.44■□□□□ 0.86
ABCA7-211ENST00000529442 KIF21AQ7Z4S6 1674 aa20.43■□□□□ 0.86
ABCA7-211ENST00000529442 PRDM2Q13029 1718 aa20.41■□□□□ 0.86
ABCA7-211ENST00000529442 CFTRP13569 1480 aa20.38■□□□□ 0.85
ABCA7-211ENST00000529442 THOC2Q8NI27 1593 aaKnown RBP20.37■□□□□ 0.85
ABCA7-211ENST00000529442 CCDC88BA6NC98 1476 aa20.31■□□□□ 0.84
ABCA7-211ENST00000529442 CEP164Q9UPV0 1460 aa20.25■□□□□ 0.83
ABCA7-211ENST00000529442 FANCD2Q9BXW9 1451 aa20.24■□□□□ 0.83
ABCA7-211ENST00000529442 MRC2Q9UBG0 1479 aa20.24■□□□□ 0.83
ABCA7-211ENST00000529442 WDR62O43379 1518 aa20.21■□□□□ 0.83
ABCA7-211ENST00000529442 ABCC8Q09428 1581 aa20.04■□□□□ 0.8
ABCA7-211ENST00000529442 SUPT5HO00267 1087 aaKnown RBP20.03■□□□□ 0.8
ABCA7-211ENST00000529442 URB2Q14146 1524 aaKnown RBP20.02■□□□□ 0.8
ABCA7-211ENST00000529442 DNMBPQ6XZF7 1577 aa19.94■□□□□ 0.78
ABCA7-211ENST00000529442 TOPBP1Q92547 1522 aa19.92■□□□□ 0.78
ABCA7-211ENST00000529442 IFT140Q96RY7 1462 aa19.85■□□□□ 0.77
ABCA7-211ENST00000529442 DNAJC5Q9H3Z4 198 aa19.8■□□□□ 0.76
ABCA7-211ENST00000529442 TARBP1Q13395 1621 aaKnown RBP19.76■□□□□ 0.75
ABCA7-211ENST00000529442 POLA1P09884 1462 aaPredicted RBP19.73■□□□□ 0.75
ABCA7-211ENST00000529442 WDR97A6NE52 1622 aa19.73■□□□□ 0.75
ABCA7-211ENST00000529442 CUX1P39880 1505 aa19.72■□□□□ 0.75
ABCA7-211ENST00000529442 EIF4G3O43432 1585 aaKnown RBP19.68■□□□□ 0.74
ABCA7-211ENST00000529442 FGD5Q6ZNL6 1462 aa19.67■□□□□ 0.74
ABCA7-211ENST00000529442 ZNF608Q9ULD9 1512 aaPredicted RBP19.66■□□□□ 0.74
ABCA7-211ENST00000529442 BIVM-ERCC5R4GMW8 1640 aa19.65■□□□□ 0.74
ABCA7-211ENST00000529442 SOGA1O94964 1423 aa19.64■□□□□ 0.73
ABCA7-211ENST00000529442 TOP2BQ02880 1626 aa19.62■□□□□ 0.73
ABCA7-211ENST00000529442 WRNQ14191 1432 aaPredicted RBP eCLIP19.59■□□□□ 0.73
ABCA7-211ENST00000529442 RAD54L2Q9Y4B4 1467 aa19.58■□□□□ 0.72
ABCA7-211ENST00000529442 AQRO60306 1485 aaKnown RBP eCLIP19.54■□□□□ 0.728e-9■■■■■ 42.1
ABCA7-211ENST00000529442 SYNJ1O43426 1573 aa19.53■□□□□ 0.72
ABCA7-211ENST00000529442 ABCA10Q8WWZ4 1543 aa19.53■□□□□ 0.72
ABCA7-211ENST00000529442 OSCARQ8IYS5 282 aa19.5■□□□□ 0.71
ABCA7-211ENST00000529442 PBRM1Q86U86 1689 aa19.49■□□□□ 0.71
ABCA7-211ENST00000529442 ABCA5Q8WWZ7 1642 aa19.48■□□□□ 0.71
ABCA7-211ENST00000529442 CHD1O14646 1710 aa19.48■□□□□ 0.71
ABCA7-211ENST00000529442 TDRD9Q8NDG6 1382 aaKnown RBP19.47■□□□□ 0.71
ABCA7-211ENST00000529442 GRIN2BQ13224 1484 aa19.47■□□□□ 0.71
ABCA7-211ENST00000529442 MAGI1Q96QZ7 1491 aaPredicted RBP19.47■□□□□ 0.71
ABCA7-211ENST00000529442 GAPVD1Q14C86 1478 aa19.44■□□□□ 0.7
ABCA7-211ENST00000529442 SNAPC4Q5SXM2 1469 aa19.39■□□□□ 0.69
ABCA7-211ENST00000529442 SYNJ2O15056 1496 aa19.35■□□□□ 0.69
ABCA7-211ENST00000529442 ERICH3Q5RHP9 1530 aa19.34■□□□□ 0.69
ABCA7-211ENST00000529442 CHMP7Q8WUX9 453 aaPredicted RBP19.28■□□□□ 0.68
ABCA7-211ENST00000529442 ADAMTS12P58397 1594 aa19.27■□□□□ 0.68
ABCA7-211ENST00000529442 FBLN2P98095 1184 aa19.26■□□□□ 0.67
ABCA7-211ENST00000529442 CLASP1Q7Z460 1538 aa19.25■□□□□ 0.67
ABCA7-211ENST00000529442 RIMBP3CA6NJZ7 1639 aa19.23■□□□□ 0.67
ABCA7-211ENST00000529442 RIMBP3BA6NNM3 1639 aa19.23■□□□□ 0.67
ABCA7-211ENST00000529442 RIMBP3Q9UFD9 1639 aa19.23■□□□□ 0.67
ABCA7-211ENST00000529442 FHAD1B1AJZ9 1412 aa19.23■□□□□ 0.67
ABCA7-211ENST00000529442 KIF27Q86VH2 1401 aa19.21■□□□□ 0.67
ABCA7-211ENST00000529442 GRIN2AQ12879 1464 aa19.21■□□□□ 0.67
ABCA7-211ENST00000529442 ARHGEF11O15085 1522 aa19.2■□□□□ 0.66
ABCA7-211ENST00000529442 CUL7Q14999 1698 aa19.19■□□□□ 0.66
ABCA7-211ENST00000529442 NUP160Q12769 1436 aa19.13■□□□□ 0.65
ABCA7-211ENST00000529442 CEP170Q5SW79 1584 aa19.1■□□□□ 0.65
ABCA7-211ENST00000529442 IGF1RP08069 1367 aa19.08■□□□□ 0.65
ABCA7-211ENST00000529442 SHROOM2Q13796 1616 aa19.07■□□□□ 0.64
ABCA7-211ENST00000529442 TRIM41Q8WV44 630 aa19.01■□□□□ 0.63
ABCA7-211ENST00000529442 ARAP1Q96P48 1450 aa19.01■□□□□ 0.63
ABCA7-211ENST00000529442 RUSC2Q8N2Y8 1516 aa19■□□□□ 0.63
ABCA7-211ENST00000529442 CARMIL1Q5VZK9 1371 aa18.98■□□□□ 0.63
ABCA7-211ENST00000529442 KIAA0586Q9BVV6 1533 aa18.95■□□□□ 0.62
ABCA7-211ENST00000529442 CYB5RLQ6IPT4 315 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms