RNA–Protein interactions for RNA: ENST00000529400.5

XRRA1-210, Transcript of X-ray radiation resistance associated 1, humanhuman

TSL 4

Gene XRRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRRA1-210ENST00000529400 NISCHQ9Y2I1 1504 aa40.53■■■■■ 4.08
XRRA1-210ENST00000529400 CCDC180Q9P1Z9 1646 aa36.28■■■■□ 3.4
XRRA1-210ENST00000529400 ABCC9O60706 1549 aa36.13■■■■□ 3.37
XRRA1-210ENST00000529400 RB1CC1Q8TDY2 1594 aa34.5■■■■□ 3.11
XRRA1-210ENST00000529400 NACADO15069 1562 aa34.32■■■■□ 3.08
XRRA1-210ENST00000529400 DCAF8L2P0C7V8 631 aa34.23■■■■□ 3.07
XRRA1-210ENST00000529400 MYO15BQ96JP2 1530 aa33.91■■■■□ 3.02
XRRA1-210ENST00000529400 DNAJC5BQ9UF47 199 aa33.7■■■□□ 2.99
XRRA1-210ENST00000529400 PABPN1Q86U42 306 aaKnown RBP eCLIP33.68■■■□□ 2.98
XRRA1-210ENST00000529400 ZCCHC6Q5VYS8 1495 aaKnown RBP33.61■■■□□ 2.97
XRRA1-210ENST00000529400 UNC13AQ9UPW8 1703 aa33.56■■■□□ 2.96
XRRA1-210ENST00000529400 DCAF1Q9Y4B6 1507 aa33.52■■■□□ 2.96
XRRA1-210ENST00000529400 BICRAQ9NZM4 1560 aa33.38■■■□□ 2.93
XRRA1-210ENST00000529400 SHROOM4Q9ULL8 1493 aa33.1■■■□□ 2.89
XRRA1-210ENST00000529400 SCRIBQ14160 1630 aa33.04■■■□□ 2.88
XRRA1-210ENST00000529400 CC2D2AQ9P2K1 1620 aa32.62■■■□□ 2.81
XRRA1-210ENST00000529400 EIF4G1Q04637 1599 aaKnown RBP32.61■■■□□ 2.81
XRRA1-210ENST00000529400 CECR2Q9BXF3 1484 aa32.56■■■□□ 2.8
XRRA1-210ENST00000529400 NCAPD3P42695 1498 aa31.68■■■□□ 2.66
XRRA1-210ENST00000529400 ATAD2BQ9ULI0 1458 aa31.58■■■□□ 2.65
XRRA1-210ENST00000529400 SMARCA4P51532 1647 aa31.55■■■□□ 2.64
XRRA1-210ENST00000529400 SMARCA2P51531 1590 aa31.54■■■□□ 2.64
XRRA1-210ENST00000529400 BAZ1AQ9NRL2 1556 aaPredicted RBP31.47■■■□□ 2.63
XRRA1-210ENST00000529400 HMGXB3Q12766 1538 aa31.43■■■□□ 2.62
XRRA1-210ENST00000529400 BAZ1BQ9UIG0 1483 aaKnown RBP31.31■■■□□ 2.6
XRRA1-210ENST00000529400 PEG3Q9GZU2 1588 aa31.26■■■□□ 2.6
XRRA1-210ENST00000529400 ERCC6Q03468 1493 aa31.25■■■□□ 2.59
XRRA1-210ENST00000529400 MROH2BQ7Z745 1585 aa31.19■■■□□ 2.58
XRRA1-210ENST00000529400 CUX2O14529 1486 aa31.13■■■□□ 2.57
XRRA1-210ENST00000529400 NESP48681 1621 aa31.04■■■□□ 2.56
XRRA1-210ENST00000529400 DNAJC5Q9H3Z4 198 aa30.93■■■□□ 2.54
XRRA1-210ENST00000529400 LAMC3Q9Y6N6 1575 aa30.92■■■□□ 2.54
XRRA1-210ENST00000529400 PDS5BQ9NTI5 1447 aa30.81■■■□□ 2.52
XRRA1-210ENST00000529400 WIZO95785 1651 aa30.8■■■□□ 2.52
XRRA1-210ENST00000529400 CADPSQ9ULU8 1353 aa30.74■■■□□ 2.51
XRRA1-210ENST00000529400 THOC2Q8NI27 1593 aaKnown RBP30.68■■■□□ 2.5
XRRA1-210ENST00000529400 RSF1Q96T23 1441 aaPredicted RBP30.64■■■□□ 2.5
XRRA1-210ENST00000529400 KIF21AQ7Z4S6 1674 aa30.62■■■□□ 2.49
XRRA1-210ENST00000529400 TOP2AP11388 1531 aaKnown RBP30.49■■■□□ 2.47
XRRA1-210ENST00000529400 MRC2Q9UBG0 1479 aa30.47■■■□□ 2.47
XRRA1-210ENST00000529400 CFTRP13569 1480 aa30.39■■■□□ 2.46
XRRA1-210ENST00000529400 CEP164Q9UPV0 1460 aa30.39■■■□□ 2.46
XRRA1-210ENST00000529400 FANCD2Q9BXW9 1451 aa30.36■■■□□ 2.45
XRRA1-210ENST00000529400 WDR62O43379 1518 aa30.35■■■□□ 2.45
XRRA1-210ENST00000529400 CCDC88BA6NC98 1476 aa30.13■■■□□ 2.41
XRRA1-210ENST00000529400 URB2Q14146 1524 aaKnown RBP30.05■■■□□ 2.4
XRRA1-210ENST00000529400 PRDM2Q13029 1718 aa30.02■■■□□ 2.4
XRRA1-210ENST00000529400 ABCC8Q09428 1581 aa29.82■■■□□ 2.36
XRRA1-210ENST00000529400 IFT140Q96RY7 1462 aa29.8■■■□□ 2.36
XRRA1-210ENST00000529400 OSCARQ8IYS5 282 aa29.79■■■□□ 2.36
XRRA1-210ENST00000529400 TOPBP1Q92547 1522 aa29.79■■■□□ 2.36
XRRA1-210ENST00000529400 DNMBPQ6XZF7 1577 aa29.69■■■□□ 2.34
XRRA1-210ENST00000529400 ZNF608Q9ULD9 1512 aaPredicted RBP29.65■■■□□ 2.34
XRRA1-210ENST00000529400 TRIM41Q8WV44 630 aa29.64■■■□□ 2.34
XRRA1-210ENST00000529400 EIF4G3O43432 1585 aaKnown RBP29.49■■■□□ 2.31
XRRA1-210ENST00000529400 POLA1P09884 1462 aaPredicted RBP29.48■■■□□ 2.31
XRRA1-210ENST00000529400 SUPT5HO00267 1087 aaKnown RBP29.47■■■□□ 2.31
XRRA1-210ENST00000529400 TARBP1Q13395 1621 aaKnown RBP29.46■■■□□ 2.31
XRRA1-210ENST00000529400 AQRO60306 1485 aaKnown RBP eCLIP29.43■■■□□ 2.3
XRRA1-210ENST00000529400 SOGA1O94964 1423 aa29.41■■■□□ 2.3
XRRA1-210ENST00000529400 RAD54L2Q9Y4B4 1467 aa29.36■■■□□ 2.29
XRRA1-210ENST00000529400 FGD5Q6ZNL6 1462 aa29.33■■■□□ 2.29
XRRA1-210ENST00000529400 TDRD9Q8NDG6 1382 aaKnown RBP29.3■■■□□ 2.28
XRRA1-210ENST00000529400 CUX1P39880 1505 aa29.3■■■□□ 2.28
XRRA1-210ENST00000529400 FBLN2P98095 1184 aa29.29■■■□□ 2.28
XRRA1-210ENST00000529400 WDR97A6NE52 1622 aa29.27■■■□□ 2.28
XRRA1-210ENST00000529400 RIMBP3CA6NJZ7 1639 aa29.24■■■□□ 2.27
XRRA1-210ENST00000529400 RIMBP3BA6NNM3 1639 aa29.24■■■□□ 2.27
XRRA1-210ENST00000529400 RIMBP3Q9UFD9 1639 aa29.24■■■□□ 2.27
XRRA1-210ENST00000529400 ARHGEF11O15085 1522 aa29.2■■■□□ 2.27
XRRA1-210ENST00000529400 CHD1O14646 1710 aa29.2■■■□□ 2.27
XRRA1-210ENST00000529400 GRIN2BQ13224 1484 aa29.14■■■□□ 2.26
XRRA1-210ENST00000529400 SNAPC4Q5SXM2 1469 aa29.14■■■□□ 2.26
XRRA1-210ENST00000529400 CHMP7Q8WUX9 453 aaPredicted RBP29.13■■■□□ 2.25
XRRA1-210ENST00000529400 MAGI1Q96QZ7 1491 aaPredicted RBP29.11■■■□□ 2.25
XRRA1-210ENST00000529400 CYB5RLQ6IPT4 315 aa29.05■■■□□ 2.24
XRRA1-210ENST00000529400 GAPVD1Q14C86 1478 aa29.04■■■□□ 2.24
XRRA1-210ENST00000529400 ABCA10Q8WWZ4 1543 aa29.03■■■□□ 2.24
XRRA1-210ENST00000529400 SYNJ2O15056 1496 aa29.01■■■□□ 2.23
XRRA1-210ENST00000529400 WRNQ14191 1432 aaPredicted RBP eCLIP29■■■□□ 2.23
XRRA1-210ENST00000529400 SYNJ1O43426 1573 aa28.99■■■□□ 2.23
XRRA1-210ENST00000529400 PBRM1Q86U86 1689 aa28.93■■■□□ 2.22
XRRA1-210ENST00000529400 ARAP1Q96P48 1450 aa28.91■■■□□ 2.22
XRRA1-210ENST00000529400 ABCA5Q8WWZ7 1642 aa28.91■■■□□ 2.22
XRRA1-210ENST00000529400 CLASP1Q7Z460 1538 aa28.91■■■□□ 2.22
XRRA1-210ENST00000529400 TOP2BQ02880 1626 aa28.9■■■□□ 2.22
XRRA1-210ENST00000529400 BIVM-ERCC5R4GMW8 1640 aa28.87■■■□□ 2.21
XRRA1-210ENST00000529400 GRIN2AQ12879 1464 aa28.72■■■□□ 2.19
XRRA1-210ENST00000529400 TRHP20396 242 aaPredicted RBP28.71■■■□□ 2.19
XRRA1-210ENST00000529400 FHAD1B1AJZ9 1412 aa28.7■■■□□ 2.19
XRRA1-210ENST00000529400 ADAMTS12P58397 1594 aa28.69■■■□□ 2.18
XRRA1-210ENST00000529400 ERICH3Q5RHP9 1530 aa28.68■■■□□ 2.18
XRRA1-210ENST00000529400 NUP160Q12769 1436 aa28.62■■■□□ 2.17
XRRA1-210ENST00000529400 CEP170Q5SW79 1584 aa28.57■■■□□ 2.16
XRRA1-210ENST00000529400 AEBP2Q6ZN18 517 aaPredicted RBP28.48■■■□□ 2.15
XRRA1-210ENST00000529400 SHROOM2Q13796 1616 aa28.43■■■□□ 2.14
XRRA1-210ENST00000529400 ERCC6L2Q5T890 1561 aa28.43■■■□□ 2.14
XRRA1-210ENST00000529400 KIF27Q86VH2 1401 aa28.43■■■□□ 2.14
XRRA1-210ENST00000529400 JPH4Q96JJ6 628 aa28.39■■■□□ 2.14
XRRA1-210ENST00000529400 PRG4Q92954 1404 aaPredicted RBP28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms