RNA–Protein interactions for RNA: ENST00000529352.1

PC-209, Transcript of pyruvate carboxylase, humanhuman

TSL 1 (best)

Gene PC, Length 291 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PC-209ENST00000529352 NISCHQ9Y2I1 1504 aa30.19■■■□□ 2.42
PC-209ENST00000529352 CCDC180Q9P1Z9 1646 aa27.08■■□□□ 1.93
PC-209ENST00000529352 ABCC9O60706 1549 aa26.81■■□□□ 1.88
PC-209ENST00000529352 RB1CC1Q8TDY2 1594 aa25.62■■□□□ 1.69
PC-209ENST00000529352 NACADO15069 1562 aa25.48■■□□□ 1.67
PC-209ENST00000529352 DCAF8L2P0C7V8 631 aa25.25■■□□□ 1.63
PC-209ENST00000529352 UNC13AQ9UPW8 1703 aa25.21■■□□□ 1.63
PC-209ENST00000529352 MYO15BQ96JP2 1530 aa25.19■■□□□ 1.62
PC-209ENST00000529352 ZCCHC6Q5VYS8 1495 aaKnown RBP25.09■■□□□ 1.61
PC-209ENST00000529352 DNAJC5BQ9UF47 199 aa24.96■■□□□ 1.59
PC-209ENST00000529352 DCAF1Q9Y4B6 1507 aa24.95■■□□□ 1.58
PC-209ENST00000529352 PABPN1Q86U42 306 aaKnown RBP eCLIP24.94■■□□□ 1.58
PC-209ENST00000529352 BICRAQ9NZM4 1560 aa24.93■■□□□ 1.58
PC-209ENST00000529352 SCRIBQ14160 1630 aa24.67■■□□□ 1.54
PC-209ENST00000529352 SHROOM4Q9ULL8 1493 aa24.55■■□□□ 1.52
PC-209ENST00000529352 CC2D2AQ9P2K1 1620 aa24.28■■□□□ 1.48
PC-209ENST00000529352 EIF4G1Q04637 1599 aaKnown RBP24.27■■□□□ 1.48
PC-209ENST00000529352 CECR2Q9BXF3 1484 aa24.12■■□□□ 1.45
PC-209ENST00000529352 SMARCA4P51532 1647 aa23.55■■□□□ 1.36
PC-209ENST00000529352 NCAPD3P42695 1498 aa23.49■■□□□ 1.35
PC-209ENST00000529352 ATAD2BQ9ULI0 1458 aa23.47■■□□□ 1.35
PC-209ENST00000529352 SMARCA2P51531 1590 aa23.43■■□□□ 1.34
PC-209ENST00000529352 BAZ1AQ9NRL2 1556 aaPredicted RBP23.42■■□□□ 1.34
PC-209ENST00000529352 HMGXB3Q12766 1538 aa23.39■■□□□ 1.34
PC-209ENST00000529352 PEG3Q9GZU2 1588 aa23.31■■□□□ 1.32
PC-209ENST00000529352 MROH2BQ7Z745 1585 aa23.28■■□□□ 1.32
PC-209ENST00000529352 BAZ1BQ9UIG0 1483 aaKnown RBP23.25■■□□□ 1.31
PC-209ENST00000529352 NESP48681 1621 aa23.12■■□□□ 1.29
PC-209ENST00000529352 ERCC6Q03468 1493 aa23.11■■□□□ 1.29
PC-209ENST00000529352 WIZO95785 1651 aa23.06■■□□□ 1.28
PC-209ENST00000529352 CUX2O14529 1486 aa23.03■■□□□ 1.28
PC-209ENST00000529352 LAMC3Q9Y6N6 1575 aa22.98■■□□□ 1.27
PC-209ENST00000529352 KIF21AQ7Z4S6 1674 aa22.91■■□□□ 1.26
PC-209ENST00000529352 THOC2Q8NI27 1593 aaKnown RBP22.91■■□□□ 1.26
PC-209ENST00000529352 RSF1Q96T23 1441 aaPredicted RBP22.82■■□□□ 1.24
PC-209ENST00000529352 CADPSQ9ULU8 1353 aa22.76■■□□□ 1.23
PC-209ENST00000529352 PDS5BQ9NTI5 1447 aa22.76■■□□□ 1.23
PC-209ENST00000529352 TOP2AP11388 1531 aaKnown RBP22.74■■□□□ 1.23
PC-209ENST00000529352 DNAJC5Q9H3Z4 198 aa22.73■■□□□ 1.23
PC-209ENST00000529352 MRC2Q9UBG0 1479 aa22.61■■□□□ 1.21
PC-209ENST00000529352 WDR62O43379 1518 aa22.59■■□□□ 1.21
PC-209ENST00000529352 CFTRP13569 1480 aa22.59■■□□□ 1.21
PC-209ENST00000529352 CEP164Q9UPV0 1460 aa22.56■■□□□ 1.2
PC-209ENST00000529352 FANCD2Q9BXW9 1451 aa22.54■■□□□ 1.2
PC-209ENST00000529352 PRDM2Q13029 1718 aa22.54■■□□□ 1.2
PC-209ENST00000529352 CCDC88BA6NC98 1476 aa22.44■■□□□ 1.18
PC-209ENST00000529352 URB2Q14146 1524 aaKnown RBP22.38■■□□□ 1.17
PC-209ENST00000529352 TOPBP1Q92547 1522 aa22.16■■□□□ 1.14
PC-209ENST00000529352 DNMBPQ6XZF7 1577 aa22.12■■□□□ 1.13
PC-209ENST00000529352 IFT140Q96RY7 1462 aa22.09■■□□□ 1.13
PC-209ENST00000529352 ZNF608Q9ULD9 1512 aaPredicted RBP22.07■■□□□ 1.12
PC-209ENST00000529352 ABCC8Q09428 1581 aa22.07■■□□□ 1.12
PC-209ENST00000529352 EIF4G3O43432 1585 aaKnown RBP22■■□□□ 1.11
PC-209ENST00000529352 TARBP1Q13395 1621 aaKnown RBP22■■□□□ 1.11
PC-209ENST00000529352 POLA1P09884 1462 aaPredicted RBP21.95■■□□□ 1.1
PC-209ENST00000529352 OSCARQ8IYS5 282 aa21.91■■□□□ 1.1
PC-209ENST00000529352 SUPT5HO00267 1087 aaKnown RBP21.88■■□□□ 1.09
PC-209ENST00000529352 CUX1P39880 1505 aa21.87■■□□□ 1.09
PC-209ENST00000529352 CHD1O14646 1710 aa21.86■■□□□ 1.09
PC-209ENST00000529352 AQRO60306 1485 aaKnown RBP eCLIP21.85■■□□□ 1.09
PC-209ENST00000529352 RAD54L2Q9Y4B4 1467 aa21.85■■□□□ 1.09
PC-209ENST00000529352 FGD5Q6ZNL6 1462 aa21.83■■□□□ 1.09
PC-209ENST00000529352 TRIM41Q8WV44 630 aa21.81■■□□□ 1.08
PC-209ENST00000529352 SOGA1O94964 1423 aa21.79■■□□□ 1.08
PC-209ENST00000529352 WDR97A6NE52 1622 aa21.78■■□□□ 1.08
PC-209ENST00000529352 RIMBP3CA6NJZ7 1639 aa21.77■■□□□ 1.07
PC-209ENST00000529352 RIMBP3BA6NNM3 1639 aa21.77■■□□□ 1.07
PC-209ENST00000529352 RIMBP3Q9UFD9 1639 aa21.77■■□□□ 1.07
PC-209ENST00000529352 TDRD9Q8NDG6 1382 aaKnown RBP21.74■■□□□ 1.07
PC-209ENST00000529352 ARHGEF11O15085 1522 aa21.68■■□□□ 1.06
PC-209ENST00000529352 SNAPC4Q5SXM2 1469 aa21.67■■□□□ 1.06
PC-209ENST00000529352 PBRM1Q86U86 1689 aa21.66■■□□□ 1.06
PC-209ENST00000529352 BIVM-ERCC5R4GMW8 1640 aa21.62■■□□□ 1.05
PC-209ENST00000529352 ABCA5Q8WWZ7 1642 aa21.61■■□□□ 1.05
PC-209ENST00000529352 GRIN2BQ13224 1484 aa21.6■■□□□ 1.05
PC-209ENST00000529352 MAGI1Q96QZ7 1491 aaPredicted RBP21.6■■□□□ 1.05
PC-209ENST00000529352 FBLN2P98095 1184 aa21.6■■□□□ 1.05
PC-209ENST00000529352 ABCA10Q8WWZ4 1543 aa21.59■■□□□ 1.05
PC-209ENST00000529352 TOP2BQ02880 1626 aa21.58■■□□□ 1.04
PC-209ENST00000529352 SYNJ1O43426 1573 aa21.57■■□□□ 1.04
PC-209ENST00000529352 GAPVD1Q14C86 1478 aa21.57■■□□□ 1.04
PC-209ENST00000529352 CLASP1Q7Z460 1538 aa21.55■■□□□ 1.04
PC-209ENST00000529352 SYNJ2O15056 1496 aa21.52■■□□□ 1.04
PC-209ENST00000529352 WRNQ14191 1432 aaPredicted RBP eCLIP21.52■■□□□ 1.04
PC-209ENST00000529352 ARAP1Q96P48 1450 aa21.49■■□□□ 1.03
PC-209ENST00000529352 CHMP7Q8WUX9 453 aaPredicted RBP21.47■■□□□ 1.03
PC-209ENST00000529352 ADAMTS12P58397 1594 aa21.43■■□□□ 1.02
PC-209ENST00000529352 CYB5RLQ6IPT4 315 aa21.4■■□□□ 1.02
PC-209ENST00000529352 GRIN2AQ12879 1464 aa21.35■■□□□ 1.01
PC-209ENST00000529352 ERICH3Q5RHP9 1530 aa21.33■■□□□ 1
PC-209ENST00000529352 CEP170Q5SW79 1584 aa21.31■■□□□ 1
PC-209ENST00000529352 FHAD1B1AJZ9 1412 aa21.29■■□□□ 1
PC-209ENST00000529352 NUP160Q12769 1436 aa21.28■■□□□ 1
PC-209ENST00000529352 ERCC6L2Q5T890 1561 aa21.23■□□□□ 0.99
PC-209ENST00000529352 SHROOM2Q13796 1616 aa21.22■□□□□ 0.99
PC-209ENST00000529352 RUSC2Q8N2Y8 1516 aa21.13■□□□□ 0.97
PC-209ENST00000529352 CUL7Q14999 1698 aa21.09■□□□□ 0.97
PC-209ENST00000529352 TRHP20396 242 aaPredicted RBP21.08■□□□□ 0.97
PC-209ENST00000529352 KIF27Q86VH2 1401 aa21.07■□□□□ 0.96
PC-209ENST00000529352 IGF1RP08069 1367 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms