RNA–Protein interactions for RNA: ENST00000529330.1

RELA-214, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 3

Gene RELA, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-214ENST00000529330 NISCHQ9Y2I1 1504 aa29.86■■■□□ 2.37
RELA-214ENST00000529330 ABCC9O60706 1549 aa27.28■■□□□ 1.96
RELA-214ENST00000529330 CCDC180Q9P1Z9 1646 aa27.08■■□□□ 1.93
RELA-214ENST00000529330 DNAJC5BQ9UF47 199 aa25.91■■□□□ 1.74
RELA-214ENST00000529330 RB1CC1Q8TDY2 1594 aa25.89■■□□□ 1.73
RELA-214ENST00000529330 NACADO15069 1562 aa25.63■■□□□ 1.69
RELA-214ENST00000529330 UNC13AQ9UPW8 1703 aa25.42■■□□□ 1.66
RELA-214ENST00000529330 PABPN1Q86U42 306 aaKnown RBP eCLIP25.25■■□□□ 1.63
RELA-214ENST00000529330 MYO15BQ96JP2 1530 aa25.19■■□□□ 1.62
RELA-214ENST00000529330 BICRAQ9NZM4 1560 aa25.18■■□□□ 1.62
RELA-214ENST00000529330 DCAF8L2P0C7V8 631 aa25.13■■□□□ 1.61
RELA-214ENST00000529330 SHROOM4Q9ULL8 1493 aa24.84■■□□□ 1.57
RELA-214ENST00000529330 CC2D2AQ9P2K1 1620 aa24.72■■□□□ 1.55
RELA-214ENST00000529330 DCAF1Q9Y4B6 1507 aa24.71■■□□□ 1.55
RELA-214ENST00000529330 ZCCHC6Q5VYS8 1495 aaKnown RBP24.69■■□□□ 1.54
RELA-214ENST00000529330 CECR2Q9BXF3 1484 aa24.64■■□□□ 1.54
RELA-214ENST00000529330 EIF4G1Q04637 1599 aaKnown RBP24.57■■□□□ 1.52
RELA-214ENST00000529330 SCRIBQ14160 1630 aa24.53■■□□□ 1.52
RELA-214ENST00000529330 DNAJC5Q9H3Z4 198 aa24.12■■□□□ 1.45
RELA-214ENST00000529330 CUX2O14529 1486 aa23.77■■□□□ 1.4
RELA-214ENST00000529330 NCAPD3P42695 1498 aa23.63■■□□□ 1.37
RELA-214ENST00000529330 ERCC6Q03468 1493 aa23.58■■□□□ 1.37
RELA-214ENST00000529330 ATAD2BQ9ULI0 1458 aa23.48■■□□□ 1.35
RELA-214ENST00000529330 HMGXB3Q12766 1538 aa23.48■■□□□ 1.35
RELA-214ENST00000529330 SMARCA2P51531 1590 aa23.44■■□□□ 1.34
RELA-214ENST00000529330 SMARCA4P51532 1647 aa23.41■■□□□ 1.34
RELA-214ENST00000529330 NESP48681 1621 aa23.35■■□□□ 1.33
RELA-214ENST00000529330 THOC2Q8NI27 1593 aaKnown RBP23.3■■□□□ 1.32
RELA-214ENST00000529330 PEG3Q9GZU2 1588 aa23.23■■□□□ 1.31
RELA-214ENST00000529330 BAZ1BQ9UIG0 1483 aaKnown RBP23.23■■□□□ 1.31
RELA-214ENST00000529330 BAZ1AQ9NRL2 1556 aaPredicted RBP23.22■■□□□ 1.31
RELA-214ENST00000529330 LAMC3Q9Y6N6 1575 aa23.2■■□□□ 1.3
RELA-214ENST00000529330 KIF21AQ7Z4S6 1674 aa23.14■■□□□ 1.29
RELA-214ENST00000529330 PDS5BQ9NTI5 1447 aa23■■□□□ 1.27
RELA-214ENST00000529330 MROH2BQ7Z745 1585 aa22.97■■□□□ 1.27
RELA-214ENST00000529330 WDR62O43379 1518 aa22.87■■□□□ 1.25
RELA-214ENST00000529330 MRC2Q9UBG0 1479 aa22.85■■□□□ 1.25
RELA-214ENST00000529330 CADPSQ9ULU8 1353 aa22.85■■□□□ 1.25
RELA-214ENST00000529330 TRIM41Q8WV44 630 aa22.79■■□□□ 1.24
RELA-214ENST00000529330 WIZO95785 1651 aa22.71■■□□□ 1.23
RELA-214ENST00000529330 CEP164Q9UPV0 1460 aa22.67■■□□□ 1.22
RELA-214ENST00000529330 FANCD2Q9BXW9 1451 aa22.6■■□□□ 1.21
RELA-214ENST00000529330 CFTRP13569 1480 aa22.54■■□□□ 1.2
RELA-214ENST00000529330 OSCARQ8IYS5 282 aa22.49■■□□□ 1.19
RELA-214ENST00000529330 URB2Q14146 1524 aaKnown RBP22.47■■□□□ 1.19
RELA-214ENST00000529330 PRDM2Q13029 1718 aa22.45■■□□□ 1.18
RELA-214ENST00000529330 TOP2AP11388 1531 aaKnown RBP22.41■■□□□ 1.18
RELA-214ENST00000529330 RIMBP3CA6NJZ7 1639 aa22.37■■□□□ 1.17
RELA-214ENST00000529330 RIMBP3BA6NNM3 1639 aa22.37■■□□□ 1.17
RELA-214ENST00000529330 RIMBP3Q9UFD9 1639 aa22.37■■□□□ 1.17
RELA-214ENST00000529330 RSF1Q96T23 1441 aaPredicted RBP22.33■■□□□ 1.17
RELA-214ENST00000529330 IFT140Q96RY7 1462 aa22.24■■□□□ 1.15
RELA-214ENST00000529330 ARHGEF11O15085 1522 aa22.23■■□□□ 1.15
RELA-214ENST00000529330 ZNF608Q9ULD9 1512 aaPredicted RBP22.22■■□□□ 1.15
RELA-214ENST00000529330 EIF4G3O43432 1585 aaKnown RBP22.16■■□□□ 1.14
RELA-214ENST00000529330 TOPBP1Q92547 1522 aa22.16■■□□□ 1.14
RELA-214ENST00000529330 CHD1O14646 1710 aa22.1■■□□□ 1.13
RELA-214ENST00000529330 CCDC88BA6NC98 1476 aa22.09■■□□□ 1.13
RELA-214ENST00000529330 ABCC8Q09428 1581 aa22.09■■□□□ 1.13
RELA-214ENST00000529330 DNMBPQ6XZF7 1577 aa22.07■■□□□ 1.12
RELA-214ENST00000529330 TARBP1Q13395 1621 aaKnown RBP22.04■■□□□ 1.12
RELA-214ENST00000529330 ARAP1Q96P48 1450 aa21.98■■□□□ 1.11
RELA-214ENST00000529330 CYB5RLQ6IPT4 315 aa21.95■■□□□ 1.1
RELA-214ENST00000529330 AQRO60306 1485 aaKnown RBP eCLIP21.93■■□□□ 1.11e-6■■□□□ 12.4
RELA-214ENST00000529330 POLA1P09884 1462 aaPredicted RBP21.9■■□□□ 1.1
RELA-214ENST00000529330 WDR97A6NE52 1622 aa21.84■■□□□ 1.09
RELA-214ENST00000529330 CLASP1Q7Z460 1538 aa21.81■■□□□ 1.08
RELA-214ENST00000529330 TRHP20396 242 aaPredicted RBP21.81■■□□□ 1.08
RELA-214ENST00000529330 RAD54L2Q9Y4B4 1467 aa21.77■■□□□ 1.08
RELA-214ENST00000529330 FBLN2P98095 1184 aa21.77■■□□□ 1.08
RELA-214ENST00000529330 SNAPC4Q5SXM2 1469 aa21.74■■□□□ 1.07
RELA-214ENST00000529330 SYNJ1O43426 1573 aa21.74■■□□□ 1.07
RELA-214ENST00000529330 SOGA1O94964 1423 aa21.73■■□□□ 1.07
RELA-214ENST00000529330 TDRD9Q8NDG6 1382 aaKnown RBP21.72■■□□□ 1.07
RELA-214ENST00000529330 MAGI1Q96QZ7 1491 aaPredicted RBP21.71■■□□□ 1.07
RELA-214ENST00000529330 FGD5Q6ZNL6 1462 aa21.69■■□□□ 1.06
RELA-214ENST00000529330 SYNJ2O15056 1496 aa21.63■■□□□ 1.05
RELA-214ENST00000529330 GRIN2BQ13224 1484 aa21.63■■□□□ 1.05
RELA-214ENST00000529330 PBRM1Q86U86 1689 aa21.63■■□□□ 1.05
RELA-214ENST00000529330 CUX1P39880 1505 aa21.62■■□□□ 1.05
RELA-214ENST00000529330 CHMP7Q8WUX9 453 aaPredicted RBP21.59■■□□□ 1.05
RELA-214ENST00000529330 GAPVD1Q14C86 1478 aa21.53■■□□□ 1.04
RELA-214ENST00000529330 ABCA5Q8WWZ7 1642 aa21.51■■□□□ 1.03
RELA-214ENST00000529330 AEBP2Q6ZN18 517 aaPredicted RBP21.47■■□□□ 1.03
RELA-214ENST00000529330 ABCA10Q8WWZ4 1543 aa21.45■■□□□ 1.02
RELA-214ENST00000529330 ERCC6L2Q5T890 1561 aa21.39■■□□□ 1.01
RELA-214ENST00000529330 GRIN2AQ12879 1464 aa21.37■■□□□ 1.01
RELA-214ENST00000529330 SHROOM2Q13796 1616 aa21.36■■□□□ 1.01
RELA-214ENST00000529330 ADAMTS12P58397 1594 aa21.36■■□□□ 1.01
RELA-214ENST00000529330 CEP170Q5SW79 1584 aa21.35■■□□□ 1.01
RELA-214ENST00000529330 NUP160Q12769 1436 aa21.33■■□□□ 1.01
RELA-214ENST00000529330 KIF13AQ9H1H9 1805 aa21.32■■□□□ 1
RELA-214ENST00000529330 BIVM-ERCC5R4GMW8 1640 aa21.25■□□□□ 0.99
RELA-214ENST00000529330 WRNQ14191 1432 aaPredicted RBP eCLIP21.22■□□□□ 0.99
RELA-214ENST00000529330 TOP2BQ02880 1626 aa21.21■□□□□ 0.99
RELA-214ENST00000529330 FHAD1B1AJZ9 1412 aa21.21■□□□□ 0.99
RELA-214ENST00000529330 ERICH3Q5RHP9 1530 aa21.19■□□□□ 0.98
RELA-214ENST00000529330 PRG4Q92954 1404 aaPredicted RBP21.08■□□□□ 0.97
RELA-214ENST00000529330 RUSC2Q8N2Y8 1516 aa21.08■□□□□ 0.96
RELA-214ENST00000529330 MAPKBP1O60336 1514 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms