RNA–Protein interactions for RNA: ENST00000529303.1

PAMR1-202, Transcript of peptidase domain containing associated with muscle regeneration 1, humanhuman

TSL 4

Gene PAMR1, Length 551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAMR1-202ENST00000529303 NISCHQ9Y2I1 1504 aa30.03■■■□□ 2.4
PAMR1-202ENST00000529303 CCDC180Q9P1Z9 1646 aa26.72■■□□□ 1.87
PAMR1-202ENST00000529303 ABCC9O60706 1549 aa26.19■■□□□ 1.78
PAMR1-202ENST00000529303 RB1CC1Q8TDY2 1594 aa25.18■■□□□ 1.62
PAMR1-202ENST00000529303 DCAF8L2P0C7V8 631 aa25.18■■□□□ 1.62
PAMR1-202ENST00000529303 NACADO15069 1562 aa25.14■■□□□ 1.61
PAMR1-202ENST00000529303 ZCCHC6Q5VYS8 1495 aaKnown RBP25■■□□□ 1.59
PAMR1-202ENST00000529303 MYO15BQ96JP2 1530 aa24.95■■□□□ 1.58
PAMR1-202ENST00000529303 DCAF1Q9Y4B6 1507 aa24.83■■□□□ 1.57
PAMR1-202ENST00000529303 UNC13AQ9UPW8 1703 aa24.59■■□□□ 1.53
PAMR1-202ENST00000529303 PABPN1Q86U42 306 aaKnown RBP eCLIP24.47■■□□□ 1.51
PAMR1-202ENST00000529303 SCRIBQ14160 1630 aa24.39■■□□□ 1.5
PAMR1-202ENST00000529303 BICRAQ9NZM4 1560 aa24.37■■□□□ 1.49
PAMR1-202ENST00000529303 SHROOM4Q9ULL8 1493 aa24.14■■□□□ 1.46
PAMR1-202ENST00000529303 DNAJC5BQ9UF47 199 aa24.03■■□□□ 1.44
PAMR1-202ENST00000529303 EIF4G1Q04637 1599 aaKnown RBP23.77■■□□□ 1.4
PAMR1-202ENST00000529303 CC2D2AQ9P2K1 1620 aa23.68■■□□□ 1.38
PAMR1-202ENST00000529303 CECR2Q9BXF3 1484 aa23.54■■□□□ 1.36
PAMR1-202ENST00000529303 SMARCA4P51532 1647 aa23.32■■□□□ 1.32
PAMR1-202ENST00000529303 BAZ1AQ9NRL2 1556 aaPredicted RBP23.3■■□□□ 1.32
PAMR1-202ENST00000529303 ATAD2BQ9ULI0 1458 aa23.19■■□□□ 1.3
PAMR1-202ENST00000529303 SMARCA2P51531 1590 aa23.18■■□□□ 1.3
PAMR1-202ENST00000529303 NCAPD3P42695 1498 aa23.17■■□□□ 1.3
PAMR1-202ENST00000529303 MROH2BQ7Z745 1585 aa23.14■■□□□ 1.29
PAMR1-202ENST00000529303 HMGXB3Q12766 1538 aa23.07■■□□□ 1.28
PAMR1-202ENST00000529303 PEG3Q9GZU2 1588 aa23.06■■□□□ 1.28
PAMR1-202ENST00000529303 BAZ1BQ9UIG0 1483 aaKnown RBP23.03■■□□□ 1.28
PAMR1-202ENST00000529303 WIZO95785 1651 aa22.9■■□□□ 1.26
PAMR1-202ENST00000529303 RSF1Q96T23 1441 aaPredicted RBP22.86■■□□□ 1.25
PAMR1-202ENST00000529303 TOP2AP11388 1531 aaKnown RBP22.66■■□□□ 1.22
PAMR1-202ENST00000529303 NESP48681 1621 aa22.64■■□□□ 1.21
PAMR1-202ENST00000529303 ERCC6Q03468 1493 aa22.6■■□□□ 1.21
PAMR1-202ENST00000529303 LAMC3Q9Y6N6 1575 aa22.59■■□□□ 1.21
PAMR1-202ENST00000529303 CADPSQ9ULU8 1353 aa22.51■■□□□ 1.19
PAMR1-202ENST00000529303 PDS5BQ9NTI5 1447 aa22.46■■□□□ 1.19
PAMR1-202ENST00000529303 CCDC88BA6NC98 1476 aa22.39■■□□□ 1.17
PAMR1-202ENST00000529303 KIF21AQ7Z4S6 1674 aa22.38■■□□□ 1.17
PAMR1-202ENST00000529303 CFTRP13569 1480 aa22.36■■□□□ 1.17
PAMR1-202ENST00000529303 CUX2O14529 1486 aa22.34■■□□□ 1.17
PAMR1-202ENST00000529303 SUPT5HO00267 1087 aaKnown RBP22.32■■□□□ 1.16
PAMR1-202ENST00000529303 THOC2Q8NI27 1593 aaKnown RBP22.29■■□□□ 1.16
PAMR1-202ENST00000529303 FANCD2Q9BXW9 1451 aa22.27■■□□□ 1.16
PAMR1-202ENST00000529303 CEP164Q9UPV0 1460 aa22.25■■□□□ 1.15
PAMR1-202ENST00000529303 PRDM2Q13029 1718 aa22.22■■□□□ 1.15
PAMR1-202ENST00000529303 MRC2Q9UBG0 1479 aa22.22■■□□□ 1.15
PAMR1-202ENST00000529303 WDR62O43379 1518 aa22.12■■□□□ 1.13
PAMR1-202ENST00000529303 URB2Q14146 1524 aaKnown RBP22.02■■□□□ 1.12
PAMR1-202ENST00000529303 ABCC8Q09428 1581 aa21.91■■□□□ 1.1
PAMR1-202ENST00000529303 TOPBP1Q92547 1522 aa21.9■■□□□ 1.1
PAMR1-202ENST00000529303 DNMBPQ6XZF7 1577 aa21.88■■□□□ 1.09
PAMR1-202ENST00000529303 IFT140Q96RY7 1462 aa21.78■■□□□ 1.08
PAMR1-202ENST00000529303 POLA1P09884 1462 aaPredicted RBP21.71■■□□□ 1.07
PAMR1-202ENST00000529303 CUX1P39880 1505 aa21.7■■□□□ 1.07
PAMR1-202ENST00000529303 DNAJC5Q9H3Z4 198 aa21.7■■□□□ 1.06
PAMR1-202ENST00000529303 ZNF608Q9ULD9 1512 aaPredicted RBP21.66■■□□□ 1.06
PAMR1-202ENST00000529303 FGD5Q6ZNL6 1462 aa21.66■■□□□ 1.06
PAMR1-202ENST00000529303 TARBP1Q13395 1621 aaKnown RBP21.65■■□□□ 1.06
PAMR1-202ENST00000529303 SOGA1O94964 1423 aa21.63■■□□□ 1.05
PAMR1-202ENST00000529303 RAD54L2Q9Y4B4 1467 aa21.62■■□□□ 1.05
PAMR1-202ENST00000529303 EIF4G3O43432 1585 aaKnown RBP21.59■■□□□ 1.05
PAMR1-202ENST00000529303 WRNQ14191 1432 aaPredicted RBP eCLIP21.58■■□□□ 1.05
PAMR1-202ENST00000529303 AQRO60306 1485 aaKnown RBP eCLIP21.55■■□□□ 1.04
PAMR1-202ENST00000529303 TOP2BQ02880 1626 aa21.52■■□□□ 1.04
PAMR1-202ENST00000529303 BIVM-ERCC5R4GMW8 1640 aa21.52■■□□□ 1.04
PAMR1-202ENST00000529303 TDRD9Q8NDG6 1382 aaKnown RBP21.51■■□□□ 1.03
PAMR1-202ENST00000529303 SYNJ1O43426 1573 aa21.51■■□□□ 1.03
PAMR1-202ENST00000529303 WDR97A6NE52 1622 aa21.49■■□□□ 1.03
PAMR1-202ENST00000529303 ABCA10Q8WWZ4 1543 aa21.45■■□□□ 1.02
PAMR1-202ENST00000529303 OSCARQ8IYS5 282 aa21.44■■□□□ 1.02
PAMR1-202ENST00000529303 GRIN2BQ13224 1484 aa21.39■■□□□ 1.01
PAMR1-202ENST00000529303 GAPVD1Q14C86 1478 aa21.39■■□□□ 1.01
PAMR1-202ENST00000529303 FBLN2P98095 1184 aa21.36■■□□□ 1.01
PAMR1-202ENST00000529303 SNAPC4Q5SXM2 1469 aa21.35■■□□□ 1.01
PAMR1-202ENST00000529303 ABCA5Q8WWZ7 1642 aa21.35■■□□□ 1.01
PAMR1-202ENST00000529303 PBRM1Q86U86 1689 aa21.34■■□□□ 1.01
PAMR1-202ENST00000529303 CHD1O14646 1710 aa21.33■■□□□ 1.01
PAMR1-202ENST00000529303 MAGI1Q96QZ7 1491 aaPredicted RBP21.32■■□□□ 1
PAMR1-202ENST00000529303 CHMP7Q8WUX9 453 aaPredicted RBP21.28■■□□□ 1
PAMR1-202ENST00000529303 SYNJ2O15056 1496 aa21.25■□□□□ 0.99
PAMR1-202ENST00000529303 ERICH3Q5RHP9 1530 aa21.19■□□□□ 0.98
PAMR1-202ENST00000529303 ADAMTS12P58397 1594 aa21.16■□□□□ 0.98
PAMR1-202ENST00000529303 KIF27Q86VH2 1401 aa21.15■□□□□ 0.98
PAMR1-202ENST00000529303 FHAD1B1AJZ9 1412 aa21.13■□□□□ 0.97
PAMR1-202ENST00000529303 GRIN2AQ12879 1464 aa21.1■□□□□ 0.97
PAMR1-202ENST00000529303 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
PAMR1-202ENST00000529303 CLASP1Q7Z460 1538 aa21.08■□□□□ 0.96
PAMR1-202ENST00000529303 RIMBP3CA6NJZ7 1639 aa21.07■□□□□ 0.96
PAMR1-202ENST00000529303 RIMBP3BA6NNM3 1639 aa21.07■□□□□ 0.96
PAMR1-202ENST00000529303 RIMBP3Q9UFD9 1639 aa21.07■□□□□ 0.96
PAMR1-202ENST00000529303 ARHGEF11O15085 1522 aa21.07■□□□□ 0.96
PAMR1-202ENST00000529303 IGF1RP08069 1367 aa21.04■□□□□ 0.96
PAMR1-202ENST00000529303 CUL7Q14999 1698 aa21■□□□□ 0.95
PAMR1-202ENST00000529303 NUP160Q12769 1436 aa20.99■□□□□ 0.95
PAMR1-202ENST00000529303 CEP170Q5SW79 1584 aa20.98■□□□□ 0.95
PAMR1-202ENST00000529303 CARMIL1Q5VZK9 1371 aa20.94■□□□□ 0.94
PAMR1-202ENST00000529303 RUSC2Q8N2Y8 1516 aa20.91■□□□□ 0.94
PAMR1-202ENST00000529303 CYB5RLQ6IPT4 315 aa20.9■□□□□ 0.94
PAMR1-202ENST00000529303 ARAP1Q96P48 1450 aa20.89■□□□□ 0.94
PAMR1-202ENST00000529303 SHROOM2Q13796 1616 aa20.83■□□□□ 0.93
PAMR1-202ENST00000529303 JPH4Q96JJ6 628 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms