RNA–Protein interactions for RNA: ENST00000529248.5

PAK1-213, Transcript of p21 (RAC1) activated kinase 1, humanhuman

TSL 4

Gene PAK1, Length 576 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAK1-213ENST00000529248 NISCHQ9Y2I1 1504 aa44.4■■■■■ 4.7
PAK1-213ENST00000529248 CCDC180Q9P1Z9 1646 aa39.47■■■■□ 3.91
PAK1-213ENST00000529248 ABCC9O60706 1549 aa38.74■■■■□ 3.79
PAK1-213ENST00000529248 RB1CC1Q8TDY2 1594 aa37.18■■■■□ 3.54
PAK1-213ENST00000529248 DCAF8L2P0C7V8 631 aa37.17■■■■□ 3.54
PAK1-213ENST00000529248 NACADO15069 1562 aa37.12■■■■□ 3.53
PAK1-213ENST00000529248 ZCCHC6Q5VYS8 1495 aaKnown RBP36.97■■■■□ 3.51
PAK1-213ENST00000529248 MYO15BQ96JP2 1530 aa36.84■■■■□ 3.49
PAK1-213ENST00000529248 DCAF1Q9Y4B6 1507 aa36.68■■■■□ 3.46
PAK1-213ENST00000529248 UNC13AQ9UPW8 1703 aa36.42■■■■□ 3.42
PAK1-213ENST00000529248 PABPN1Q86U42 306 aaKnown RBP eCLIP36.22■■■■□ 3.39
PAK1-213ENST00000529248 BICRAQ9NZM4 1560 aa36.11■■■■□ 3.37
PAK1-213ENST00000529248 SCRIBQ14160 1630 aa36.08■■■■□ 3.37
PAK1-213ENST00000529248 DNAJC5BQ9UF47 199 aa35.65■■■■□ 3.3
PAK1-213ENST00000529248 SHROOM4Q9ULL8 1493 aa35.6■■■■□ 3.29
PAK1-213ENST00000529248 EIF4G1Q04637 1599 aaKnown RBP35.14■■■■□ 3.22
PAK1-213ENST00000529248 CC2D2AQ9P2K1 1620 aa35.03■■■■□ 3.2
PAK1-213ENST00000529248 CECR2Q9BXF3 1484 aa34.78■■■■□ 3.16
PAK1-213ENST00000529248 SMARCA4P51532 1647 aa34.48■■■■□ 3.11
PAK1-213ENST00000529248 BAZ1AQ9NRL2 1556 aaPredicted RBP34.39■■■■□ 3.1
PAK1-213ENST00000529248 ATAD2BQ9ULI0 1458 aa34.29■■■■□ 3.08
PAK1-213ENST00000529248 NCAPD3P42695 1498 aa34.26■■■■□ 3.07
PAK1-213ENST00000529248 MROH2BQ7Z745 1585 aa34.25■■■■□ 3.07
PAK1-213ENST00000529248 SMARCA2P51531 1590 aa34.22■■■■□ 3.07
PAK1-213ENST00000529248 PEG3Q9GZU2 1588 aa34.1■■■■□ 3.05
PAK1-213ENST00000529248 HMGXB3Q12766 1538 aa34.07■■■■□ 3.04
PAK1-213ENST00000529248 BAZ1BQ9UIG0 1483 aaKnown RBP34■■■■□ 3.03
PAK1-213ENST00000529248 WIZO95785 1651 aa33.9■■■■□ 3.02
PAK1-213ENST00000529248 RSF1Q96T23 1441 aaPredicted RBP33.82■■■■□ 3
PAK1-213ENST00000529248 NESP48681 1621 aa33.53■■■□□ 2.96
PAK1-213ENST00000529248 TOP2AP11388 1531 aaKnown RBP33.48■■■□□ 2.95
PAK1-213ENST00000529248 ERCC6Q03468 1493 aa33.36■■■□□ 2.93
PAK1-213ENST00000529248 LAMC3Q9Y6N6 1575 aa33.35■■■□□ 2.93
PAK1-213ENST00000529248 CADPSQ9ULU8 1353 aa33.26■■■□□ 2.92
PAK1-213ENST00000529248 PDS5BQ9NTI5 1447 aa33.12■■■□□ 2.89
PAK1-213ENST00000529248 KIF21AQ7Z4S6 1674 aa33.12■■■□□ 2.89
PAK1-213ENST00000529248 CCDC88BA6NC98 1476 aa33.12■■■□□ 2.89
PAK1-213ENST00000529248 CFTRP13569 1480 aa33.05■■■□□ 2.88
PAK1-213ENST00000529248 THOC2Q8NI27 1593 aaKnown RBP33■■■□□ 2.87
PAK1-213ENST00000529248 CUX2O14529 1486 aa32.99■■■□□ 2.87
PAK1-213ENST00000529248 SUPT5HO00267 1087 aaKnown RBP32.97■■■□□ 2.87
PAK1-213ENST00000529248 FANCD2Q9BXW9 1451 aa32.9■■■□□ 2.86
PAK1-213ENST00000529248 CEP164Q9UPV0 1460 aa32.85■■■□□ 2.85
PAK1-213ENST00000529248 MRC2Q9UBG0 1479 aa32.82■■■□□ 2.84
PAK1-213ENST00000529248 PRDM2Q13029 1718 aa32.82■■■□□ 2.84
PAK1-213ENST00000529248 WDR62O43379 1518 aa32.72■■■□□ 2.83
PAK1-213ENST00000529248 URB2Q14146 1524 aaKnown RBP32.6■■■□□ 2.81
PAK1-213ENST00000529248 TOPBP1Q92547 1522 aa32.37■■■□□ 2.77
PAK1-213ENST00000529248 DNMBPQ6XZF7 1577 aa32.32■■■□□ 2.76
PAK1-213ENST00000529248 ABCC8Q09428 1581 aa32.3■■■□□ 2.76
PAK1-213ENST00000529248 IFT140Q96RY7 1462 aa32.16■■■□□ 2.74
PAK1-213ENST00000529248 CUX1P39880 1505 aa32.14■■■□□ 2.74
PAK1-213ENST00000529248 POLA1P09884 1462 aaPredicted RBP32.1■■■□□ 2.73
PAK1-213ENST00000529248 DNAJC5Q9H3Z4 198 aa32.08■■■□□ 2.73
PAK1-213ENST00000529248 ZNF608Q9ULD9 1512 aaPredicted RBP32.08■■■□□ 2.73
PAK1-213ENST00000529248 TARBP1Q13395 1621 aaKnown RBP32.04■■■□□ 2.72
PAK1-213ENST00000529248 FGD5Q6ZNL6 1462 aa32.03■■■□□ 2.72
PAK1-213ENST00000529248 RAD54L2Q9Y4B4 1467 aa32■■■□□ 2.71
PAK1-213ENST00000529248 SOGA1O94964 1423 aa31.96■■■□□ 2.71
PAK1-213ENST00000529248 EIF4G3O43432 1585 aaKnown RBP31.93■■■□□ 2.7
PAK1-213ENST00000529248 AQRO60306 1485 aaKnown RBP eCLIP31.89■■■□□ 2.7
PAK1-213ENST00000529248 WRNQ14191 1432 aaPredicted RBP eCLIP31.87■■■□□ 2.69
PAK1-213ENST00000529248 SYNJ1O43426 1573 aa31.85■■■□□ 2.69
PAK1-213ENST00000529248 BIVM-ERCC5R4GMW8 1640 aa31.82■■■□□ 2.68
PAK1-213ENST00000529248 TDRD9Q8NDG6 1382 aaKnown RBP31.81■■■□□ 2.68
PAK1-213ENST00000529248 TOP2BQ02880 1626 aa31.81■■■□□ 2.68
PAK1-213ENST00000529248 WDR97A6NE52 1622 aa31.76■■■□□ 2.67
PAK1-213ENST00000529248 ABCA10Q8WWZ4 1543 aa31.68■■■□□ 2.66
PAK1-213ENST00000529248 OSCARQ8IYS5 282 aa31.64■■■□□ 2.66
PAK1-213ENST00000529248 GAPVD1Q14C86 1478 aa31.59■■■□□ 2.65
PAK1-213ENST00000529248 ABCA5Q8WWZ7 1642 aa31.58■■■□□ 2.65
PAK1-213ENST00000529248 GRIN2BQ13224 1484 aa31.58■■■□□ 2.65
PAK1-213ENST00000529248 SNAPC4Q5SXM2 1469 aa31.58■■■□□ 2.65
PAK1-213ENST00000529248 CHD1O14646 1710 aa31.56■■■□□ 2.64
PAK1-213ENST00000529248 PBRM1Q86U86 1689 aa31.55■■■□□ 2.64
PAK1-213ENST00000529248 FBLN2P98095 1184 aa31.51■■■□□ 2.63
PAK1-213ENST00000529248 MAGI1Q96QZ7 1491 aaPredicted RBP31.48■■■□□ 2.63
PAK1-213ENST00000529248 CHMP7Q8WUX9 453 aaPredicted RBP31.38■■■□□ 2.61
PAK1-213ENST00000529248 SYNJ2O15056 1496 aa31.38■■■□□ 2.61
PAK1-213ENST00000529248 ERICH3Q5RHP9 1530 aa31.29■■■□□ 2.6
PAK1-213ENST00000529248 ADAMTS12P58397 1594 aa31.28■■■□□ 2.6
PAK1-213ENST00000529248 FHAD1B1AJZ9 1412 aa31.2■■■□□ 2.59
PAK1-213ENST00000529248 KIF27Q86VH2 1401 aa31.2■■■□□ 2.59
PAK1-213ENST00000529248 CLASP1Q7Z460 1538 aa31.19■■■□□ 2.58
PAK1-213ENST00000529248 RIMBP3CA6NJZ7 1639 aa31.18■■■□□ 2.58
PAK1-213ENST00000529248 RIMBP3BA6NNM3 1639 aa31.18■■■□□ 2.58
PAK1-213ENST00000529248 RIMBP3Q9UFD9 1639 aa31.18■■■□□ 2.58
PAK1-213ENST00000529248 GRIN2AQ12879 1464 aa31.18■■■□□ 2.58
PAK1-213ENST00000529248 ARHGEF11O15085 1522 aa31.14■■■□□ 2.58
PAK1-213ENST00000529248 IGF1RP08069 1367 aa31.1■■■□□ 2.57
PAK1-213ENST00000529248 TRIM41Q8WV44 630 aa31.1■■■□□ 2.57
PAK1-213ENST00000529248 CEP170Q5SW79 1584 aa31.06■■■□□ 2.56
PAK1-213ENST00000529248 NUP160Q12769 1436 aa31.04■■■□□ 2.56
PAK1-213ENST00000529248 CUL7Q14999 1698 aa31■■■□□ 2.55
PAK1-213ENST00000529248 RUSC2Q8N2Y8 1516 aa30.99■■■□□ 2.55
PAK1-213ENST00000529248 CARMIL1Q5VZK9 1371 aa30.92■■■□□ 2.54
PAK1-213ENST00000529248 ARAP1Q96P48 1450 aa30.91■■■□□ 2.54
PAK1-213ENST00000529248 CYB5RLQ6IPT4 315 aa30.88■■■□□ 2.53
PAK1-213ENST00000529248 SHROOM2Q13796 1616 aa30.82■■■□□ 2.52
PAK1-213ENST00000529248 ERCC6L2Q5T890 1561 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms