RNA–Protein interactions for RNA: ENST00000529199.1

CTSF-206, Transcript of cathepsin F, humanhuman

TSL 4

Gene CTSF, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-206ENST00000529199 NISCHQ9Y2I1 1504 aa49.81■■■■■ 5.56
CTSF-206ENST00000529199 ABCC9O60706 1549 aa44.97■■■■■ 4.79
CTSF-206ENST00000529199 CCDC180Q9P1Z9 1646 aa44.61■■■■■ 4.73
CTSF-206ENST00000529199 RB1CC1Q8TDY2 1594 aa42.64■■■■■ 4.42
CTSF-206ENST00000529199 DCAF8L2P0C7V8 631 aa42.43■■■■■ 4.38
CTSF-206ENST00000529199 DNAJC5BQ9UF47 199 aa42.36■■■■■ 4.37
CTSF-206ENST00000529199 NACADO15069 1562 aa42.3■■■■■ 4.36
CTSF-206ENST00000529199 PABPN1Q86U42 306 aaKnown RBP eCLIP41.98■■■■■ 4.31
CTSF-206ENST00000529199 MYO15BQ96JP2 1530 aa41.61■■■■■ 4.25
CTSF-206ENST00000529199 UNC13AQ9UPW8 1703 aa41.55■■■■■ 4.24
CTSF-206ENST00000529199 BICRAQ9NZM4 1560 aa41.37■■■■■ 4.21
CTSF-206ENST00000529199 ZCCHC6Q5VYS8 1495 aaKnown RBP41.21■■■■■ 4.19
CTSF-206ENST00000529199 DCAF1Q9Y4B6 1507 aa41.05■■■■■ 4.16
CTSF-206ENST00000529199 SCRIBQ14160 1630 aa40.79■■■■■ 4.12
CTSF-206ENST00000529199 SHROOM4Q9ULL8 1493 aa40.74■■■■■ 4.11
CTSF-206ENST00000529199 CC2D2AQ9P2K1 1620 aa40.52■■■■■ 4.08
CTSF-206ENST00000529199 CECR2Q9BXF3 1484 aa40.5■■■■■ 4.07
CTSF-206ENST00000529199 EIF4G1Q04637 1599 aaKnown RBP40.4■■■■■ 4.06
CTSF-206ENST00000529199 NCAPD3P42695 1498 aa39.1■■■■□ 3.85
CTSF-206ENST00000529199 ATAD2BQ9ULI0 1458 aa38.98■■■■□ 3.83
CTSF-206ENST00000529199 DNAJC5Q9H3Z4 198 aa38.97■■■■□ 3.83
CTSF-206ENST00000529199 ERCC6Q03468 1493 aa38.85■■■■□ 3.81
CTSF-206ENST00000529199 SMARCA4P51532 1647 aa38.84■■■■□ 3.81
CTSF-206ENST00000529199 SMARCA2P51531 1590 aa38.82■■■■□ 3.8
CTSF-206ENST00000529199 HMGXB3Q12766 1538 aa38.72■■■■□ 3.79
CTSF-206ENST00000529199 CUX2O14529 1486 aa38.71■■■■□ 3.79
CTSF-206ENST00000529199 BAZ1AQ9NRL2 1556 aaPredicted RBP38.65■■■■□ 3.78
CTSF-206ENST00000529199 BAZ1BQ9UIG0 1483 aaKnown RBP38.61■■■■□ 3.77
CTSF-206ENST00000529199 NESP48681 1621 aa38.58■■■■□ 3.77
CTSF-206ENST00000529199 MROH2BQ7Z745 1585 aa38.41■■■■□ 3.74
CTSF-206ENST00000529199 PEG3Q9GZU2 1588 aa38.4■■■■□ 3.74
CTSF-206ENST00000529199 LAMC3Q9Y6N6 1575 aa38.19■■■■□ 3.7
CTSF-206ENST00000529199 PDS5BQ9NTI5 1447 aa38.08■■■■□ 3.69
CTSF-206ENST00000529199 THOC2Q8NI27 1593 aaKnown RBP38.06■■■■□ 3.68
CTSF-206ENST00000529199 CADPSQ9ULU8 1353 aa37.97■■■■□ 3.67
CTSF-206ENST00000529199 KIF21AQ7Z4S6 1674 aa37.95■■■■□ 3.66
CTSF-206ENST00000529199 WIZO95785 1651 aa37.92■■■■□ 3.66
CTSF-206ENST00000529199 MRC2Q9UBG0 1479 aa37.71■■■■□ 3.63
CTSF-206ENST00000529199 RSF1Q96T23 1441 aaPredicted RBP37.61■■■■□ 3.61
CTSF-206ENST00000529199 WDR62O43379 1518 aa37.56■■■■□ 3.6
CTSF-206ENST00000529199 CEP164Q9UPV0 1460 aa37.55■■■■□ 3.6
CTSF-206ENST00000529199 FANCD2Q9BXW9 1451 aa37.52■■■■□ 3.6
CTSF-206ENST00000529199 CFTRP13569 1480 aa37.45■■■■□ 3.59
CTSF-206ENST00000529199 TOP2AP11388 1531 aaKnown RBP37.4■■■■□ 3.58
CTSF-206ENST00000529199 TRIM41Q8WV44 630 aa37.33■■■■□ 3.57
CTSF-206ENST00000529199 URB2Q14146 1524 aaKnown RBP37.19■■■■□ 3.54
CTSF-206ENST00000529199 OSCARQ8IYS5 282 aa37.1■■■■□ 3.53
CTSF-206ENST00000529199 CCDC88BA6NC98 1476 aa37.07■■■■□ 3.52
CTSF-206ENST00000529199 PRDM2Q13029 1718 aa36.87■■■■□ 3.49
CTSF-206ENST00000529199 IFT140Q96RY7 1462 aa36.8■■■■□ 3.48
CTSF-206ENST00000529199 ZNF608Q9ULD9 1512 aaPredicted RBP36.79■■■■□ 3.48
CTSF-206ENST00000529199 TOPBP1Q92547 1522 aa36.76■■■■□ 3.48
CTSF-206ENST00000529199 ABCC8Q09428 1581 aa36.67■■■■□ 3.46
CTSF-206ENST00000529199 DNMBPQ6XZF7 1577 aa36.57■■■■□ 3.45
CTSF-206ENST00000529199 AQRO60306 1485 aaKnown RBP eCLIP36.49■■■■□ 3.43
CTSF-206ENST00000529199 EIF4G3O43432 1585 aaKnown RBP36.47■■■■□ 3.43
CTSF-206ENST00000529199 RIMBP3CA6NJZ7 1639 aa36.45■■■■□ 3.43
CTSF-206ENST00000529199 RIMBP3BA6NNM3 1639 aa36.45■■■■□ 3.43
CTSF-206ENST00000529199 RIMBP3Q9UFD9 1639 aa36.45■■■■□ 3.43
CTSF-206ENST00000529199 FBLN2P98095 1184 aa36.41■■■■□ 3.42
CTSF-206ENST00000529199 TARBP1Q13395 1621 aaKnown RBP36.38■■■■□ 3.41
CTSF-206ENST00000529199 POLA1P09884 1462 aaPredicted RBP36.37■■■■□ 3.41
CTSF-206ENST00000529199 ARHGEF11O15085 1522 aa36.36■■■■□ 3.41
CTSF-206ENST00000529199 RAD54L2Q9Y4B4 1467 aa36.32■■■■□ 3.41
CTSF-206ENST00000529199 SOGA1O94964 1423 aa36.3■■■■□ 3.4
CTSF-206ENST00000529199 CYB5RLQ6IPT4 315 aa36.29■■■■□ 3.4
CTSF-206ENST00000529199 TDRD9Q8NDG6 1382 aaKnown RBP36.28■■■■□ 3.4
CTSF-206ENST00000529199 CHD1O14646 1710 aa36.21■■■■□ 3.39
CTSF-206ENST00000529199 FGD5Q6ZNL6 1462 aa36.15■■■■□ 3.38
CTSF-206ENST00000529199 CUX1P39880 1505 aa36.08■■■■□ 3.37
CTSF-206ENST00000529199 SUPT5HO00267 1087 aaKnown RBP36.06■■■■□ 3.36
CTSF-206ENST00000529199 CHMP7Q8WUX9 453 aaPredicted RBP36.06■■■■□ 3.36
CTSF-206ENST00000529199 SNAPC4Q5SXM2 1469 aa36.05■■■■□ 3.36
CTSF-206ENST00000529199 ARAP1Q96P48 1450 aa35.99■■■■□ 3.35
CTSF-206ENST00000529199 TRHP20396 242 aaPredicted RBP35.97■■■■□ 3.35
CTSF-206ENST00000529199 WDR97A6NE52 1622 aa35.94■■■■□ 3.34
CTSF-206ENST00000529199 GRIN2BQ13224 1484 aa35.93■■■■□ 3.34
CTSF-206ENST00000529199 MAGI1Q96QZ7 1491 aaPredicted RBP35.91■■■■□ 3.34
CTSF-206ENST00000529199 SYNJ1O43426 1573 aa35.81■■■■□ 3.32
CTSF-206ENST00000529199 SYNJ2O15056 1496 aa35.81■■■■□ 3.32
CTSF-206ENST00000529199 GAPVD1Q14C86 1478 aa35.81■■■■□ 3.32
CTSF-206ENST00000529199 CLASP1Q7Z460 1538 aa35.81■■■■□ 3.32
CTSF-206ENST00000529199 ABCA10Q8WWZ4 1543 aa35.7■■■■□ 3.31
CTSF-206ENST00000529199 PBRM1Q86U86 1689 aa35.66■■■■□ 3.3
CTSF-206ENST00000529199 WRNQ14191 1432 aaPredicted RBP eCLIP35.61■■■■□ 3.29
CTSF-206ENST00000529199 ABCA5Q8WWZ7 1642 aa35.59■■■■□ 3.29
CTSF-206ENST00000529199 GRIN2AQ12879 1464 aa35.46■■■■□ 3.27
CTSF-206ENST00000529199 TOP2BQ02880 1626 aa35.43■■■■□ 3.26
CTSF-206ENST00000529199 BIVM-ERCC5R4GMW8 1640 aa35.38■■■■□ 3.25
CTSF-206ENST00000529199 ADAMTS12P58397 1594 aa35.36■■■■□ 3.25
CTSF-206ENST00000529199 FHAD1B1AJZ9 1412 aa35.34■■■■□ 3.25
CTSF-206ENST00000529199 NUP160Q12769 1436 aa35.32■■■■□ 3.25
CTSF-206ENST00000529199 ERCC6L2Q5T890 1561 aa35.31■■■■□ 3.24
CTSF-206ENST00000529199 CEP170Q5SW79 1584 aa35.3■■■■□ 3.24
CTSF-206ENST00000529199 ERICH3Q5RHP9 1530 aa35.23■■■■□ 3.23
CTSF-206ENST00000529199 JPH4Q96JJ6 628 aa35.11■■■■□ 3.21
CTSF-206ENST00000529199 SHROOM2Q13796 1616 aa35.1■■■■□ 3.21
CTSF-206ENST00000529199 PRG4Q92954 1404 aaPredicted RBP35.09■■■■□ 3.21
CTSF-206ENST00000529199 AEBP2Q6ZN18 517 aaPredicted RBP35.01■■■■□ 3.2
CTSF-206ENST00000529199 IGF1RP08069 1367 aa34.87■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms