RNA–Protein interactions for RNA: ENST00000529143.1

COMMD5-204, Transcript of COMM domain containing 5, humanhuman

TSL 3

Gene COMMD5, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD5-204ENST00000529143 NISCHQ9Y2I1 1504 aa34.35■■■■□ 3.09
COMMD5-204ENST00000529143 CCDC180Q9P1Z9 1646 aa30.52■■■□□ 2.48
COMMD5-204ENST00000529143 ABCC9O60706 1549 aa30.22■■■□□ 2.43
COMMD5-204ENST00000529143 RB1CC1Q8TDY2 1594 aa28.86■■■□□ 2.21
COMMD5-204ENST00000529143 DCAF8L2P0C7V8 631 aa28.81■■■□□ 2.2
COMMD5-204ENST00000529143 NACADO15069 1562 aa28.79■■■□□ 2.2
COMMD5-204ENST00000529143 ZCCHC6Q5VYS8 1495 aaKnown RBP28.58■■■□□ 2.17
COMMD5-204ENST00000529143 MYO15BQ96JP2 1530 aa28.57■■■□□ 2.16
COMMD5-204ENST00000529143 DCAF1Q9Y4B6 1507 aa28.38■■■□□ 2.13
COMMD5-204ENST00000529143 PABPN1Q86U42 306 aaKnown RBP eCLIP28.26■■■□□ 2.11
COMMD5-204ENST00000529143 UNC13AQ9UPW8 1703 aa28.19■■■□□ 2.1
COMMD5-204ENST00000529143 BICRAQ9NZM4 1560 aa28.11■■■□□ 2.09
COMMD5-204ENST00000529143 DNAJC5BQ9UF47 199 aa28.07■■■□□ 2.08
COMMD5-204ENST00000529143 SCRIBQ14160 1630 aa27.92■■■□□ 2.06
COMMD5-204ENST00000529143 SHROOM4Q9ULL8 1493 aa27.67■■■□□ 2.02
COMMD5-204ENST00000529143 EIF4G1Q04637 1599 aaKnown RBP27.34■■□□□ 1.97
COMMD5-204ENST00000529143 CC2D2AQ9P2K1 1620 aa27.28■■□□□ 1.96
COMMD5-204ENST00000529143 CECR2Q9BXF3 1484 aa27.16■■□□□ 1.94
COMMD5-204ENST00000529143 SMARCA4P51532 1647 aa26.67■■□□□ 1.86
COMMD5-204ENST00000529143 NCAPD3P42695 1498 aa26.65■■□□□ 1.86
COMMD5-204ENST00000529143 ATAD2BQ9ULI0 1458 aa26.64■■□□□ 1.86
COMMD5-204ENST00000529143 BAZ1AQ9NRL2 1556 aaPredicted RBP26.58■■□□□ 1.85
COMMD5-204ENST00000529143 SMARCA2P51531 1590 aa26.51■■□□□ 1.83
COMMD5-204ENST00000529143 MROH2BQ7Z745 1585 aa26.51■■□□□ 1.83
COMMD5-204ENST00000529143 HMGXB3Q12766 1538 aa26.44■■□□□ 1.82
COMMD5-204ENST00000529143 PEG3Q9GZU2 1588 aa26.41■■□□□ 1.82
COMMD5-204ENST00000529143 BAZ1BQ9UIG0 1483 aaKnown RBP26.36■■□□□ 1.81
COMMD5-204ENST00000529143 WIZO95785 1651 aa26.16■■□□□ 1.78
COMMD5-204ENST00000529143 RSF1Q96T23 1441 aaPredicted RBP26.14■■□□□ 1.78
COMMD5-204ENST00000529143 NESP48681 1621 aa26.11■■□□□ 1.77
COMMD5-204ENST00000529143 ERCC6Q03468 1493 aa25.99■■□□□ 1.75
COMMD5-204ENST00000529143 LAMC3Q9Y6N6 1575 aa25.89■■□□□ 1.73
COMMD5-204ENST00000529143 CADPSQ9ULU8 1353 aa25.86■■□□□ 1.73
COMMD5-204ENST00000529143 TOP2AP11388 1531 aaKnown RBP25.86■■□□□ 1.73
COMMD5-204ENST00000529143 CUX2O14529 1486 aa25.79■■□□□ 1.72
COMMD5-204ENST00000529143 PDS5BQ9NTI5 1447 aa25.76■■□□□ 1.71
COMMD5-204ENST00000529143 THOC2Q8NI27 1593 aaKnown RBP25.69■■□□□ 1.7
COMMD5-204ENST00000529143 KIF21AQ7Z4S6 1674 aa25.68■■□□□ 1.7
COMMD5-204ENST00000529143 CFTRP13569 1480 aa25.66■■□□□ 1.7
COMMD5-204ENST00000529143 CCDC88BA6NC98 1476 aa25.61■■□□□ 1.69
COMMD5-204ENST00000529143 FANCD2Q9BXW9 1451 aa25.54■■□□□ 1.68
COMMD5-204ENST00000529143 MRC2Q9UBG0 1479 aa25.53■■□□□ 1.68
COMMD5-204ENST00000529143 CEP164Q9UPV0 1460 aa25.5■■□□□ 1.67
COMMD5-204ENST00000529143 WDR62O43379 1518 aa25.46■■□□□ 1.67
COMMD5-204ENST00000529143 DNAJC5Q9H3Z4 198 aa25.44■■□□□ 1.66
COMMD5-204ENST00000529143 URB2Q14146 1524 aaKnown RBP25.34■■□□□ 1.65
COMMD5-204ENST00000529143 SUPT5HO00267 1087 aaKnown RBP25.3■■□□□ 1.64
COMMD5-204ENST00000529143 PRDM2Q13029 1718 aa25.26■■□□□ 1.63
COMMD5-204ENST00000529143 TOPBP1Q92547 1522 aa25.12■■□□□ 1.61
COMMD5-204ENST00000529143 DNMBPQ6XZF7 1577 aa25.02■■□□□ 1.6
COMMD5-204ENST00000529143 ABCC8Q09428 1581 aa25.01■■□□□ 1.59
COMMD5-204ENST00000529143 IFT140Q96RY7 1462 aa24.98■■□□□ 1.59
COMMD5-204ENST00000529143 ZNF608Q9ULD9 1512 aaPredicted RBP24.97■■□□□ 1.59
COMMD5-204ENST00000529143 POLA1P09884 1462 aaPredicted RBP24.9■■□□□ 1.58
COMMD5-204ENST00000529143 CUX1P39880 1505 aa24.87■■□□□ 1.57
COMMD5-204ENST00000529143 TARBP1Q13395 1621 aaKnown RBP24.85■■□□□ 1.57
COMMD5-204ENST00000529143 RAD54L2Q9Y4B4 1467 aa24.83■■□□□ 1.57
COMMD5-204ENST00000529143 AQRO60306 1485 aaKnown RBP eCLIP24.8■■□□□ 1.56
COMMD5-204ENST00000529143 FGD5Q6ZNL6 1462 aa24.8■■□□□ 1.56
COMMD5-204ENST00000529143 SOGA1O94964 1423 aa24.78■■□□□ 1.56
COMMD5-204ENST00000529143 EIF4G3O43432 1585 aaKnown RBP24.77■■□□□ 1.56
COMMD5-204ENST00000529143 OSCARQ8IYS5 282 aa24.73■■□□□ 1.55
COMMD5-204ENST00000529143 TDRD9Q8NDG6 1382 aaKnown RBP24.72■■□□□ 1.55
COMMD5-204ENST00000529143 WRNQ14191 1432 aaPredicted RBP eCLIP24.6■■□□□ 1.53
COMMD5-204ENST00000529143 SYNJ1O43426 1573 aa24.57■■□□□ 1.52
COMMD5-204ENST00000529143 WDR97A6NE52 1622 aa24.54■■□□□ 1.52
COMMD5-204ENST00000529143 ABCA10Q8WWZ4 1543 aa24.54■■□□□ 1.52
COMMD5-204ENST00000529143 TOP2BQ02880 1626 aa24.53■■□□□ 1.52
COMMD5-204ENST00000529143 SNAPC4Q5SXM2 1469 aa24.52■■□□□ 1.52
COMMD5-204ENST00000529143 BIVM-ERCC5R4GMW8 1640 aa24.51■■□□□ 1.51
COMMD5-204ENST00000529143 GRIN2BQ13224 1484 aa24.5■■□□□ 1.51
COMMD5-204ENST00000529143 FBLN2P98095 1184 aa24.49■■□□□ 1.51
COMMD5-204ENST00000529143 GAPVD1Q14C86 1478 aa24.48■■□□□ 1.51
COMMD5-204ENST00000529143 CHD1O14646 1710 aa24.46■■□□□ 1.51
COMMD5-204ENST00000529143 ABCA5Q8WWZ7 1642 aa24.44■■□□□ 1.5
COMMD5-204ENST00000529143 MAGI1Q96QZ7 1491 aaPredicted RBP24.44■■□□□ 1.5
COMMD5-204ENST00000529143 TRIM41Q8WV44 630 aa24.41■■□□□ 1.5
COMMD5-204ENST00000529143 CHMP7Q8WUX9 453 aaPredicted RBP24.38■■□□□ 1.49
COMMD5-204ENST00000529143 SYNJ2O15056 1496 aa24.37■■□□□ 1.49
COMMD5-204ENST00000529143 PBRM1Q86U86 1689 aa24.35■■□□□ 1.49
COMMD5-204ENST00000529143 RIMBP3CA6NJZ7 1639 aa24.33■■□□□ 1.49
COMMD5-204ENST00000529143 RIMBP3BA6NNM3 1639 aa24.33■■□□□ 1.49
COMMD5-204ENST00000529143 RIMBP3Q9UFD9 1639 aa24.33■■□□□ 1.49
COMMD5-204ENST00000529143 ARHGEF11O15085 1522 aa24.33■■□□□ 1.49
COMMD5-204ENST00000529143 CLASP1Q7Z460 1538 aa24.26■■□□□ 1.47
COMMD5-204ENST00000529143 ADAMTS12P58397 1594 aa24.22■■□□□ 1.47
COMMD5-204ENST00000529143 ERICH3Q5RHP9 1530 aa24.2■■□□□ 1.47
COMMD5-204ENST00000529143 GRIN2AQ12879 1464 aa24.19■■□□□ 1.46
COMMD5-204ENST00000529143 FHAD1B1AJZ9 1412 aa24.18■■□□□ 1.46
COMMD5-204ENST00000529143 ARAP1Q96P48 1450 aa24.15■■□□□ 1.46
COMMD5-204ENST00000529143 CYB5RLQ6IPT4 315 aa24.15■■□□□ 1.46
COMMD5-204ENST00000529143 NUP160Q12769 1436 aa24.12■■□□□ 1.45
COMMD5-204ENST00000529143 IGF1RP08069 1367 aa24.1■■□□□ 1.45
COMMD5-204ENST00000529143 CEP170Q5SW79 1584 aa24.09■■□□□ 1.45
COMMD5-204ENST00000529143 KIF27Q86VH2 1401 aa24.08■■□□□ 1.44
COMMD5-204ENST00000529143 ERCC6L2Q5T890 1561 aa23.98■■□□□ 1.43
COMMD5-204ENST00000529143 SHROOM2Q13796 1616 aa23.92■■□□□ 1.42
COMMD5-204ENST00000529143 CARMIL1Q5VZK9 1371 aa23.91■■□□□ 1.42
COMMD5-204ENST00000529143 RUSC2Q8N2Y8 1516 aa23.9■■□□□ 1.42
COMMD5-204ENST00000529143 CUL7Q14999 1698 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms