RNA–Protein interactions for RNA: ENST00000529124.1

KDM2A-211, Transcript of lysine demethylase 2A, humanhuman

TSL 3

Gene KDM2A, Length 664 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-211ENST00000529124 NISCHQ9Y2I1 1504 aa23.48■■□□□ 1.35
KDM2A-211ENST00000529124 ABCC9O60706 1549 aa21.3■■□□□ 1
KDM2A-211ENST00000529124 DNAJC5BQ9UF47 199 aa20.74■□□□□ 0.91
KDM2A-211ENST00000529124 CCDC180Q9P1Z9 1646 aa20.73■□□□□ 0.91
KDM2A-211ENST00000529124 RB1CC1Q8TDY2 1594 aa19.88■□□□□ 0.77
KDM2A-211ENST00000529124 PABPN1Q86U42 306 aaKnown RBP eCLIP19.81■□□□□ 0.76
KDM2A-211ENST00000529124 NACADO15069 1562 aa19.61■□□□□ 0.73
KDM2A-211ENST00000529124 DCAF8L2P0C7V8 631 aa19.59■□□□□ 0.73
KDM2A-211ENST00000529124 ZCCHC6Q5VYS8 1495 aaKnown RBP19.59■□□□□ 0.73
KDM2A-211ENST00000529124 BICRAQ9NZM4 1560 aa19.45■□□□□ 0.7
KDM2A-211ENST00000529124 UNC13AQ9UPW8 1703 aa19.43■□□□□ 0.7
KDM2A-211ENST00000529124 MYO15BQ96JP2 1530 aa19.42■□□□□ 0.7
KDM2A-211ENST00000529124 DNAJC5Q9H3Z4 198 aa19.4■□□□□ 0.7
KDM2A-211ENST00000529124 DCAF1Q9Y4B6 1507 aa19.4■□□□□ 0.7
KDM2A-211ENST00000529124 CECR2Q9BXF3 1484 aa19.23■□□□□ 0.67
KDM2A-211ENST00000529124 CC2D2AQ9P2K1 1620 aa19.16■□□□□ 0.66
KDM2A-211ENST00000529124 SCRIBQ14160 1630 aa18.99■□□□□ 0.63
KDM2A-211ENST00000529124 SHROOM4Q9ULL8 1493 aa18.97■□□□□ 0.63
KDM2A-211ENST00000529124 EIF4G1Q04637 1599 aaKnown RBP18.97■□□□□ 0.63
KDM2A-211ENST00000529124 CUX2O14529 1486 aa18.54■□□□□ 0.56
KDM2A-211ENST00000529124 ERCC6Q03468 1493 aa18.35■□□□□ 0.53
KDM2A-211ENST00000529124 TRIM41Q8WV44 630 aa18.24■□□□□ 0.51
KDM2A-211ENST00000529124 NCAPD3P42695 1498 aa18.2■□□□□ 0.5
KDM2A-211ENST00000529124 SMARCA4P51532 1647 aa18.16■□□□□ 0.5
KDM2A-211ENST00000529124 NESP48681 1621 aa18.16■□□□□ 0.5
KDM2A-211ENST00000529124 BAZ1AQ9NRL2 1556 aaPredicted RBP18.15■□□□□ 0.5
KDM2A-211ENST00000529124 MROH2BQ7Z745 1585 aa18.13■□□□□ 0.49
KDM2A-211ENST00000529124 ATAD2BQ9ULI0 1458 aa18.07■□□□□ 0.48
KDM2A-211ENST00000529124 SMARCA2P51531 1590 aa18■□□□□ 0.47
KDM2A-211ENST00000529124 THOC2Q8NI27 1593 aaKnown RBP18■□□□□ 0.47
KDM2A-211ENST00000529124 PEG3Q9GZU2 1588 aa17.98■□□□□ 0.47
KDM2A-211ENST00000529124 RSF1Q96T23 1441 aaPredicted RBP17.97■□□□□ 0.47
KDM2A-211ENST00000529124 HMGXB3Q12766 1538 aa17.92■□□□□ 0.46
KDM2A-211ENST00000529124 WIZO95785 1651 aa17.9■□□□□ 0.46
KDM2A-211ENST00000529124 BAZ1BQ9UIG0 1483 aaKnown RBP17.89■□□□□ 0.45
KDM2A-211ENST00000529124 LAMC3Q9Y6N6 1575 aa17.79■□□□□ 0.44
KDM2A-211ENST00000529124 KIF21AQ7Z4S6 1674 aa17.77■□□□□ 0.43
KDM2A-211ENST00000529124 PDS5BQ9NTI5 1447 aa17.75■□□□□ 0.43
KDM2A-211ENST00000529124 TOP2AP11388 1531 aaKnown RBP17.71■□□□□ 0.43
KDM2A-211ENST00000529124 OSCARQ8IYS5 282 aa17.66■□□□□ 0.42
KDM2A-211ENST00000529124 MRC2Q9UBG0 1479 aa17.63■□□□□ 0.41
KDM2A-211ENST00000529124 SUPT5HO00267 1087 aaKnown RBP17.62■□□□□ 0.41
KDM2A-211ENST00000529124 CADPSQ9ULU8 1353 aa17.62■□□□□ 0.41
KDM2A-211ENST00000529124 WDR62O43379 1518 aa17.62■□□□□ 0.41
KDM2A-211ENST00000529124 CCDC88BA6NC98 1476 aa17.54■□□□□ 0.4
KDM2A-211ENST00000529124 RIMBP3CA6NJZ7 1639 aa17.46■□□□□ 0.39
KDM2A-211ENST00000529124 RIMBP3BA6NNM3 1639 aa17.46■□□□□ 0.39
KDM2A-211ENST00000529124 RIMBP3Q9UFD9 1639 aa17.46■□□□□ 0.39
KDM2A-211ENST00000529124 CFTRP13569 1480 aa17.44■□□□□ 0.38
KDM2A-211ENST00000529124 CEP164Q9UPV0 1460 aa17.42■□□□□ 0.38
KDM2A-211ENST00000529124 FANCD2Q9BXW9 1451 aa17.39■□□□□ 0.37
KDM2A-211ENST00000529124 ARHGEF11O15085 1522 aa17.36■□□□□ 0.37
KDM2A-211ENST00000529124 URB2Q14146 1524 aaKnown RBP17.33■□□□□ 0.37
KDM2A-211ENST00000529124 CYB5RLQ6IPT4 315 aa17.33■□□□□ 0.36
KDM2A-211ENST00000529124 TRHP20396 242 aaPredicted RBP17.28■□□□□ 0.36
KDM2A-211ENST00000529124 ZNF608Q9ULD9 1512 aaPredicted RBP17.25■□□□□ 0.35
KDM2A-211ENST00000529124 PRDM2Q13029 1718 aa17.19■□□□□ 0.34
KDM2A-211ENST00000529124 AEBP2Q6ZN18 517 aaPredicted RBP17.19■□□□□ 0.34
KDM2A-211ENST00000529124 ARAP1Q96P48 1450 aa17.18■□□□□ 0.34
KDM2A-211ENST00000529124 IFT140Q96RY7 1462 aa17.12■□□□□ 0.33
KDM2A-211ENST00000529124 TOPBP1Q92547 1522 aa17.05■□□□□ 0.32
KDM2A-211ENST00000529124 DNMBPQ6XZF7 1577 aa17.02■□□□□ 0.31
KDM2A-211ENST00000529124 ABCC8Q09428 1581 aa17.01■□□□□ 0.31
KDM2A-211ENST00000529124 AQRO60306 1485 aaKnown RBP eCLIP17■□□□□ 0.315e-12■■■□□ 15.2
KDM2A-211ENST00000529124 EIF4G3O43432 1585 aaKnown RBP17■□□□□ 0.31
KDM2A-211ENST00000529124 CUX1P39880 1505 aa16.98■□□□□ 0.31
KDM2A-211ENST00000529124 FBLN2P98095 1184 aa16.97■□□□□ 0.31
KDM2A-211ENST00000529124 CHD1O14646 1710 aa16.96■□□□□ 0.3
KDM2A-211ENST00000529124 POLA1P09884 1462 aaPredicted RBP16.92■□□□□ 0.3
KDM2A-211ENST00000529124 WRNQ14191 1432 aaPredicted RBP eCLIP16.91■□□□□ 0.3
KDM2A-211ENST00000529124 FGD5Q6ZNL6 1462 aa16.89■□□□□ 0.29
KDM2A-211ENST00000529124 TARBP1Q13395 1621 aaKnown RBP16.88■□□□□ 0.29
KDM2A-211ENST00000529124 RAD54L2Q9Y4B4 1467 aa16.87■□□□□ 0.29
KDM2A-211ENST00000529124 SYNJ1O43426 1573 aa16.86■□□□□ 0.29
KDM2A-211ENST00000529124 SOGA1O94964 1423 aa16.86■□□□□ 0.29
KDM2A-211ENST00000529124 TOP2BQ02880 1626 aa16.83■□□□□ 0.28
KDM2A-211ENST00000529124 CLASP1Q7Z460 1538 aa16.83■□□□□ 0.28
KDM2A-211ENST00000529124 BIVM-ERCC5R4GMW8 1640 aa16.81■□□□□ 0.28
KDM2A-211ENST00000529124 TDRD9Q8NDG6 1382 aaKnown RBP16.8■□□□□ 0.28
KDM2A-211ENST00000529124 SNAPC4Q5SXM2 1469 aa16.74■□□□□ 0.27
KDM2A-211ENST00000529124 CHMP7Q8WUX9 453 aaPredicted RBP16.73■□□□□ 0.27
KDM2A-211ENST00000529124 ABCA10Q8WWZ4 1543 aa16.72■□□□□ 0.27
KDM2A-211ENST00000529124 WDR97A6NE52 1622 aa16.7■□□□□ 0.26
KDM2A-211ENST00000529124 GAPVD1Q14C86 1478 aa16.7■□□□□ 0.26
KDM2A-211ENST00000529124 ILDR1Q86SU0 546 aaPredicted RBP16.67■□□□□ 0.26
KDM2A-211ENST00000529124 ABCA5Q8WWZ7 1642 aa16.63■□□□□ 0.25
KDM2A-211ENST00000529124 MAGI1Q96QZ7 1491 aaPredicted RBP16.63■□□□□ 0.25
KDM2A-211ENST00000529124 GRIN2BQ13224 1484 aa16.62■□□□□ 0.25
KDM2A-211ENST00000529124 SYNJ2O15056 1496 aa16.61■□□□□ 0.25
KDM2A-211ENST00000529124 ERCC6L2Q5T890 1561 aa16.6■□□□□ 0.25
KDM2A-211ENST00000529124 KDM4FA0A1W2PPD8 638 aa16.55■□□□□ 0.24
KDM2A-211ENST00000529124 PBRM1Q86U86 1689 aa16.54■□□□□ 0.24
KDM2A-211ENST00000529124 KIF27Q86VH2 1401 aa16.53■□□□□ 0.24
KDM2A-211ENST00000529124 CHIC1Q5VXU3 224 aa16.53■□□□□ 0.24
KDM2A-211ENST00000529124 ERICH3Q5RHP9 1530 aa16.5■□□□□ 0.23
KDM2A-211ENST00000529124 IGF1RP08069 1367 aa16.5■□□□□ 0.23
KDM2A-211ENST00000529124 RUSC2Q8N2Y8 1516 aa16.5■□□□□ 0.23
KDM2A-211ENST00000529124 ADAMTS12P58397 1594 aa16.47■□□□□ 0.23
KDM2A-211ENST00000529124 FHAD1B1AJZ9 1412 aa16.45■□□□□ 0.22
KDM2A-211ENST00000529124 KIF13AQ9H1H9 1805 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms