RNA–Protein interactions for RNA: ENST00000529040.1

TRIM29-212, Transcript of tripartite motif containing 29, humanhuman

TSL 4

Gene TRIM29, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-212ENST00000529040 NISCHQ9Y2I1 1504 aa29.62■■■□□ 2.33
TRIM29-212ENST00000529040 ABCC9O60706 1549 aa26.8■■□□□ 1.88
TRIM29-212ENST00000529040 CCDC180Q9P1Z9 1646 aa26.76■■□□□ 1.87
TRIM29-212ENST00000529040 RB1CC1Q8TDY2 1594 aa25.49■■□□□ 1.67
TRIM29-212ENST00000529040 NACADO15069 1562 aa25.26■■□□□ 1.63
TRIM29-212ENST00000529040 DNAJC5BQ9UF47 199 aa25.14■■□□□ 1.62
TRIM29-212ENST00000529040 UNC13AQ9UPW8 1703 aa25.02■■□□□ 1.6
TRIM29-212ENST00000529040 DCAF8L2P0C7V8 631 aa25.01■■□□□ 1.59
TRIM29-212ENST00000529040 PABPN1Q86U42 306 aaKnown RBP eCLIP24.85■■□□□ 1.57
TRIM29-212ENST00000529040 MYO15BQ96JP2 1530 aa24.81■■□□□ 1.56
TRIM29-212ENST00000529040 BICRAQ9NZM4 1560 aa24.72■■□□□ 1.55
TRIM29-212ENST00000529040 ZCCHC6Q5VYS8 1495 aaKnown RBP24.54■■□□□ 1.52
TRIM29-212ENST00000529040 DCAF1Q9Y4B6 1507 aa24.45■■□□□ 1.51
TRIM29-212ENST00000529040 SHROOM4Q9ULL8 1493 aa24.38■■□□□ 1.49
TRIM29-212ENST00000529040 SCRIBQ14160 1630 aa24.35■■□□□ 1.49
TRIM29-212ENST00000529040 CC2D2AQ9P2K1 1620 aa24.24■■□□□ 1.47
TRIM29-212ENST00000529040 CECR2Q9BXF3 1484 aa24.15■■□□□ 1.46
TRIM29-212ENST00000529040 EIF4G1Q04637 1599 aaKnown RBP24.15■■□□□ 1.46
TRIM29-212ENST00000529040 NCAPD3P42695 1498 aa23.25■■□□□ 1.31
TRIM29-212ENST00000529040 DNAJC5Q9H3Z4 198 aa23.22■■□□□ 1.31
TRIM29-212ENST00000529040 SMARCA4P51532 1647 aa23.2■■□□□ 1.3
TRIM29-212ENST00000529040 ATAD2BQ9ULI0 1458 aa23.18■■□□□ 1.3
TRIM29-212ENST00000529040 ERCC6Q03468 1493 aa23.17■■□□□ 1.3
TRIM29-212ENST00000529040 SMARCA2P51531 1590 aa23.16■■□□□ 1.3
TRIM29-212ENST00000529040 CUX2O14529 1486 aa23.16■■□□□ 1.3
TRIM29-212ENST00000529040 HMGXB3Q12766 1538 aa23.14■■□□□ 1.3
TRIM29-212ENST00000529040 BAZ1AQ9NRL2 1556 aaPredicted RBP23.04■■□□□ 1.28
TRIM29-212ENST00000529040 BAZ1BQ9UIG0 1483 aaKnown RBP22.99■■□□□ 1.27
TRIM29-212ENST00000529040 NESP48681 1621 aa22.97■■□□□ 1.27
TRIM29-212ENST00000529040 PEG3Q9GZU2 1588 aa22.94■■□□□ 1.26
TRIM29-212ENST00000529040 THOC2Q8NI27 1593 aaKnown RBP22.84■■□□□ 1.25
TRIM29-212ENST00000529040 LAMC3Q9Y6N6 1575 aa22.84■■□□□ 1.25
TRIM29-212ENST00000529040 MROH2BQ7Z745 1585 aa22.82■■□□□ 1.24
TRIM29-212ENST00000529040 KIF21AQ7Z4S6 1674 aa22.79■■□□□ 1.24
TRIM29-212ENST00000529040 PDS5BQ9NTI5 1447 aa22.65■■□□□ 1.22
TRIM29-212ENST00000529040 WIZO95785 1651 aa22.61■■□□□ 1.21
TRIM29-212ENST00000529040 CADPSQ9ULU8 1353 aa22.52■■□□□ 1.2
TRIM29-212ENST00000529040 MRC2Q9UBG0 1479 aa22.5■■□□□ 1.19
TRIM29-212ENST00000529040 WDR62O43379 1518 aa22.47■■□□□ 1.19
TRIM29-212ENST00000529040 CEP164Q9UPV0 1460 aa22.39■■□□□ 1.17
TRIM29-212ENST00000529040 FANCD2Q9BXW9 1451 aa22.33■■□□□ 1.16
TRIM29-212ENST00000529040 TOP2AP11388 1531 aaKnown RBP22.29■■□□□ 1.16
TRIM29-212ENST00000529040 CFTRP13569 1480 aa22.27■■□□□ 1.16
TRIM29-212ENST00000529040 RSF1Q96T23 1441 aaPredicted RBP22.25■■□□□ 1.15
TRIM29-212ENST00000529040 PRDM2Q13029 1718 aa22.24■■□□□ 1.15
TRIM29-212ENST00000529040 TRIM41Q8WV44 630 aa22.2■■□□□ 1.14
TRIM29-212ENST00000529040 URB2Q14146 1524 aaKnown RBP22.15■■□□□ 1.14
TRIM29-212ENST00000529040 OSCARQ8IYS5 282 aa22■■□□□ 1.11
TRIM29-212ENST00000529040 CCDC88BA6NC98 1476 aa21.97■■□□□ 1.11
TRIM29-212ENST00000529040 IFT140Q96RY7 1462 aa21.91■■□□□ 1.1
TRIM29-212ENST00000529040 TOPBP1Q92547 1522 aa21.9■■□□□ 1.1
TRIM29-212ENST00000529040 ZNF608Q9ULD9 1512 aaPredicted RBP21.89■■□□□ 1.09
TRIM29-212ENST00000529040 RIMBP3CA6NJZ7 1639 aa21.86■■□□□ 1.09
TRIM29-212ENST00000529040 RIMBP3BA6NNM3 1639 aa21.86■■□□□ 1.09
TRIM29-212ENST00000529040 RIMBP3Q9UFD9 1639 aa21.86■■□□□ 1.09
TRIM29-212ENST00000529040 EIF4G3O43432 1585 aaKnown RBP21.86■■□□□ 1.09
TRIM29-212ENST00000529040 DNMBPQ6XZF7 1577 aa21.84■■□□□ 1.09
TRIM29-212ENST00000529040 ABCC8Q09428 1581 aa21.82■■□□□ 1.08
TRIM29-212ENST00000529040 CHD1O14646 1710 aa21.77■■□□□ 1.08
TRIM29-212ENST00000529040 TARBP1Q13395 1621 aaKnown RBP21.74■■□□□ 1.07
TRIM29-212ENST00000529040 ARHGEF11O15085 1522 aa21.74■■□□□ 1.07
TRIM29-212ENST00000529040 AQRO60306 1485 aaKnown RBP eCLIP21.65■■□□□ 1.06
TRIM29-212ENST00000529040 POLA1P09884 1462 aaPredicted RBP21.65■■□□□ 1.06
TRIM29-212ENST00000529040 RAD54L2Q9Y4B4 1467 aa21.56■■□□□ 1.04
TRIM29-212ENST00000529040 FBLN2P98095 1184 aa21.53■■□□□ 1.04
TRIM29-212ENST00000529040 WDR97A6NE52 1622 aa21.53■■□□□ 1.04
TRIM29-212ENST00000529040 FGD5Q6ZNL6 1462 aa21.52■■□□□ 1.03
TRIM29-212ENST00000529040 CYB5RLQ6IPT4 315 aa21.51■■□□□ 1.03
TRIM29-212ENST00000529040 SOGA1O94964 1423 aa21.51■■□□□ 1.03
TRIM29-212ENST00000529040 ARAP1Q96P48 1450 aa21.51■■□□□ 1.03
TRIM29-212ENST00000529040 TDRD9Q8NDG6 1382 aaKnown RBP21.48■■□□□ 1.03
TRIM29-212ENST00000529040 SNAPC4Q5SXM2 1469 aa21.48■■□□□ 1.03
TRIM29-212ENST00000529040 CUX1P39880 1505 aa21.47■■□□□ 1.03
TRIM29-212ENST00000529040 SYNJ1O43426 1573 aa21.42■■□□□ 1.02
TRIM29-212ENST00000529040 CLASP1Q7Z460 1538 aa21.42■■□□□ 1.02
TRIM29-212ENST00000529040 PBRM1Q86U86 1689 aa21.42■■□□□ 1.02
TRIM29-212ENST00000529040 MAGI1Q96QZ7 1491 aaPredicted RBP21.41■■□□□ 1.02
TRIM29-212ENST00000529040 GRIN2BQ13224 1484 aa21.38■■□□□ 1.01
TRIM29-212ENST00000529040 TRHP20396 242 aaPredicted RBP21.34■■□□□ 1.01
TRIM29-212ENST00000529040 CHMP7Q8WUX9 453 aaPredicted RBP21.34■■□□□ 1.01
TRIM29-212ENST00000529040 SYNJ2O15056 1496 aa21.33■■□□□ 1.01
TRIM29-212ENST00000529040 ABCA5Q8WWZ7 1642 aa21.29■■□□□ 1
TRIM29-212ENST00000529040 GAPVD1Q14C86 1478 aa21.28■■□□□ 1
TRIM29-212ENST00000529040 ABCA10Q8WWZ4 1543 aa21.24■□□□□ 0.99
TRIM29-212ENST00000529040 SUPT5HO00267 1087 aaKnown RBP21.15■□□□□ 0.98
TRIM29-212ENST00000529040 BIVM-ERCC5R4GMW8 1640 aa21.15■□□□□ 0.98
TRIM29-212ENST00000529040 ADAMTS12P58397 1594 aa21.14■□□□□ 0.98
TRIM29-212ENST00000529040 GRIN2AQ12879 1464 aa21.12■□□□□ 0.97
TRIM29-212ENST00000529040 TOP2BQ02880 1626 aa21.11■□□□□ 0.97
TRIM29-212ENST00000529040 WRNQ14191 1432 aaPredicted RBP eCLIP21.11■□□□□ 0.97
TRIM29-212ENST00000529040 CEP170Q5SW79 1584 aa21.08■□□□□ 0.97
TRIM29-212ENST00000529040 ERCC6L2Q5T890 1561 aa21.07■□□□□ 0.96
TRIM29-212ENST00000529040 NUP160Q12769 1436 aa21.03■□□□□ 0.96
TRIM29-212ENST00000529040 SHROOM2Q13796 1616 aa21.02■□□□□ 0.96
TRIM29-212ENST00000529040 ERICH3Q5RHP9 1530 aa20.99■□□□□ 0.95
TRIM29-212ENST00000529040 FHAD1B1AJZ9 1412 aa20.99■□□□□ 0.95
TRIM29-212ENST00000529040 KIF13AQ9H1H9 1805 aa20.88■□□□□ 0.93
TRIM29-212ENST00000529040 RUSC2Q8N2Y8 1516 aa20.86■□□□□ 0.93
TRIM29-212ENST00000529040 AEBP2Q6ZN18 517 aaPredicted RBP20.84■□□□□ 0.93
TRIM29-212ENST00000529040 PRG4Q92954 1404 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms